Literature DB >> 24384570

Bending "on the rocks"--a cocktail of biophysical modules to build endocytic pathways.

Ludger Johannes1, Christian Wunder, Patricia Bassereau.   

Abstract

Numerous biological processes rely on endocytosis. The construction of endocytic pits is achieved by a bewildering complexity of biochemical factors that function in clathrin-dependent and -independent pathways. In this review, we argue that this complexity can be conceptualized by a deceptively small number of physical principles that fall into two broad categories: passive mechanisms, such as asymmetric transbilayer stress, scaffolding, line tension, and crowding, and active mechanisms driven by mechanochemical enzymes and/or cytoskeleton. We illustrate how the functional identity of biochemical modules depends on system parameters such as local protein density on membranes, thus explaining some of the controversy in the field. Different modules frequently operate in parallel in the same step and often are shared by apparently divergent uptake processes. The emergence of a novel endocytic classification system may thus be envisioned in which functional modules are the elementary bricks.

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Mesh:

Year:  2014        PMID: 24384570      PMCID: PMC3941223          DOI: 10.1101/cshperspect.a016741

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  104 in total

1.  Induced domain formation in endocytic invagination, lipid sorting, and scission.

Authors:  Ludger Johannes; Satyajit Mayor
Journal:  Cell       Date:  2010-08-20       Impact factor: 41.582

2.  Shiga toxin induces tubular membrane invaginations for its uptake into cells.

Authors:  Winfried Römer; Ludwig Berland; Valérie Chambon; Katharina Gaus; Barbara Windschiegl; Danièle Tenza; Mohamed R E Aly; Vincent Fraisier; Jean-Claude Florent; David Perrais; Christophe Lamaze; Graça Raposo; Claudia Steinem; Pierre Sens; Patricia Bassereau; Ludger Johannes
Journal:  Nature       Date:  2007-11-29       Impact factor: 49.962

3.  The BAR domain superfamily: membrane-molding macromolecules.

Authors:  Adam Frost; Vinzenz M Unger; Pietro De Camilli
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

4.  Effect of line tension on the lateral organization of lipid membranes.

Authors:  Ana J García-Sáez; Salvatore Chiantia; Petra Schwille
Journal:  J Biol Chem       Date:  2007-09-11       Impact factor: 5.157

Review 5.  Mechanisms of membrane curvature sensing.

Authors:  Bruno Antonny
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

6.  Ultrastructural dynamics of proteins involved in endocytic budding.

Authors:  Fatima-Zahra Idrissi; Anabel Blasco; Anna Espinal; María Isabel Geli
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

7.  Cells respond to mechanical stress by rapid disassembly of caveolae.

Authors:  Bidisha Sinha; Darius Köster; Richard Ruez; Pauline Gonnord; Michele Bastiani; Daniel Abankwa; Radu V Stan; Gillian Butler-Browne; Benoit Vedie; Ludger Johannes; Nobuhiro Morone; Robert G Parton; Graça Raposo; Pierre Sens; Christophe Lamaze; Pierre Nassoy
Journal:  Cell       Date:  2011-02-04       Impact factor: 41.582

Review 8.  Seeing is believing: imaging actin dynamics at single sites of endocytosis.

Authors:  Christien J Merrifield
Journal:  Trends Cell Biol       Date:  2004-07       Impact factor: 20.808

9.  Geometric catalysis of membrane fission driven by flexible dynamin rings.

Authors:  Anna V Shnyrova; Pavel V Bashkirov; Sergey A Akimov; Thomas J Pucadyil; Joshua Zimmerberg; Sandra L Schmid; Vadim A Frolov
Journal:  Science       Date:  2013-03-22       Impact factor: 47.728

Review 10.  Endocytosis unplugged: multiple ways to enter the cell.

Authors:  Sudha Kumari; Swetha Mg; Satyajit Mayor
Journal:  Cell Res       Date:  2010-02-02       Impact factor: 25.617

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  31 in total

Review 1.  Building endocytic pits without clathrin.

Authors:  Ludger Johannes; Robert G Parton; Patricia Bassereau; Satyajit Mayor
Journal:  Nat Rev Mol Cell Biol       Date:  2015-04-10       Impact factor: 94.444

2.  Endocytosis: Past, present, and future.

Authors:  Sandra L Schmid; Alexander Sorkin; Marino Zerial
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-10-30       Impact factor: 10.005

3.  Design principles for robust vesiculation in clathrin-mediated endocytosis.

Authors:  Julian E Hassinger; George Oster; David G Drubin; Padmini Rangamani
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-26       Impact factor: 11.205

Review 4.  When Physics Takes Over: BAR Proteins and Membrane Curvature.

Authors:  Mijo Simunovic; Gregory A Voth; Andrew Callan-Jones; Patricia Bassereau
Journal:  Trends Cell Biol       Date:  2015-10-28       Impact factor: 20.808

Review 5.  The role of endocytosis during morphogenetic signaling.

Authors:  Marcos Gonzalez-Gaitan; Frank Jülicher
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-01       Impact factor: 10.005

Review 6.  Function and regulation of the endosomal fusion and fission machineries.

Authors:  Alexis Gautreau; Ksenia Oguievetskaia; Christian Ungermann
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-03-01       Impact factor: 10.005

Review 7.  Molecular structure, function, and dynamics of clathrin-mediated membrane traffic.

Authors:  Tom Kirchhausen; David Owen; Stephen C Harrison
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-05-01       Impact factor: 10.005

8.  Clathrin-independent pathways of endocytosis.

Authors:  Satyajit Mayor; Robert G Parton; Julie G Donaldson
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-06-02       Impact factor: 10.005

Review 9.  Multiscale simulations of protein-facilitated membrane remodeling.

Authors:  Aram Davtyan; Mijo Simunovic; Gregory A Voth
Journal:  J Struct Biol       Date:  2016-06-17       Impact factor: 2.867

10.  Membrane scission driven by the PROPPIN Atg18.

Authors:  Navin Gopaldass; Bruno Fauvet; Hilal Lashuel; Aurélien Roux; Andreas Mayer
Journal:  EMBO J       Date:  2017-10-13       Impact factor: 11.598

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