Literature DB >> 22994488

'Gestalt,' composition and function of the Trypanosoma brucei editosome.

H Ulrich Göringer1.   

Abstract

RNA editing describes a chemically diverse set of biomolecular reactions in which the nucleotide sequence of RNA molecules is altered. Editing reactions have been identified in many organisms and frequently contribute to the maturation of organellar transcripts. A special editing reaction has evolved within the mitochondria of the kinetoplastid protozoa. The process is characterized by the insertion and deletion of uridine nucleotides into otherwise nontranslatable messenger RNAs. Kinetoplastid RNA editing involves an exclusive class of small, noncoding RNAs known as guide RNAs. Furthermore, a unique molecular machinery, the editosome, catalyzes the process. Editosomes are megadalton multienzyme assemblies that provide a catalytic surface for the individual steps of the reaction cycle. Here I review the current mechanistic understanding and molecular inventory of kinetoplastid RNA editing and the editosome machinery. Special emphasis is placed on the molecular morphology of the editing complex in order to correlate structural features with functional characteristics.

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Year:  2012        PMID: 22994488     DOI: 10.1146/annurev-micro-092611-150150

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  29 in total

1.  Differential Editosome Protein Function between Life Cycle Stages of Trypanosoma brucei.

Authors:  Suzanne M McDermott; Xuemin Guo; Jason Carnes; Kenneth Stuart
Journal:  J Biol Chem       Date:  2015-08-24       Impact factor: 5.157

2.  Kinetoplast DNA-encoded ribosomal protein S12: a possible functional link between mitochondrial RNA editing and translation in Trypanosoma brucei.

Authors:  Inna Aphasizheva; Dmitri A Maslov; Ruslan Aphasizhev
Journal:  RNA Biol       Date:  2013-10-14       Impact factor: 4.652

3.  RNA binding and core complexes constitute the U-insertion/deletion editosome.

Authors:  Inna Aphasizheva; Liye Zhang; Xiaorong Wang; Robyn M Kaake; Lan Huang; Stefano Monti; Ruslan Aphasizhev
Journal:  Mol Cell Biol       Date:  2014-09-15       Impact factor: 4.272

Review 4.  DNA repair pathways in trypanosomatids: from DNA repair to drug resistance.

Authors:  Marie-Michelle Genois; Eric R Paquet; Marie-Claude N Laffitte; Ranjan Maity; Amélie Rodrigue; Marc Ouellette; Jean-Yves Masson
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

Review 5.  Post-transcriptional mending of gene sequences: Looking under the hood of mitochondrial gene expression in diplonemids.

Authors:  Matus Valach; Sandrine Moreira; Drahomíra Faktorová; Julius Lukeš; Gertraud Burger
Journal:  RNA Biol       Date:  2016-10-07       Impact factor: 4.652

6.  Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.

Authors:  Damien Guillaumot; Mauricio Lopez-Obando; Kevin Baudry; Alexandra Avon; Guillem Rigaill; Andéol Falcon de Longevialle; Benjamin Broche; Mizuki Takenaka; Richard Berthomé; Geert De Jaeger; Etienne Delannoy; Claire Lurin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

7.  Trypanosome RNA Editing Mediator Complex proteins have distinct functions in gRNA utilization.

Authors:  Rachel M Simpson; Andrew E Bruno; Runpu Chen; Kaylen Lott; Brianna L Tylec; Jonathan E Bard; Yijun Sun; Michael J Buck; Laurie K Read
Journal:  Nucleic Acids Res       Date:  2017-07-27       Impact factor: 16.971

8.  Identification by Random Mutagenesis of Functional Domains in KREPB5 That Differentially Affect RNA Editing between Life Cycle Stages of Trypanosoma brucei.

Authors:  Suzanne M McDermott; Jason Carnes; Kenneth Stuart
Journal:  Mol Cell Biol       Date:  2015-09-14       Impact factor: 4.272

Review 9.  Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes.

Authors:  Inna Aphasizheva; Juan Alfonzo; Jason Carnes; Igor Cestari; Jorge Cruz-Reyes; H Ulrich Göringer; Stephen Hajduk; Julius Lukeš; Susan Madison-Antenucci; Dmitri A Maslov; Suzanne M McDermott; Torsten Ochsenreiter; Laurie K Read; Reza Salavati; Achim Schnaufer; André Schneider; Larry Simpson; Kenneth Stuart; Vyacheslav Yurchenko; Z Hong Zhou; Alena Zíková; Liye Zhang; Sara Zimmer; Ruslan Aphasizhev
Journal:  Trends Parasitol       Date:  2020-02-28

10.  Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila.

Authors:  Madalena M Reimão-Pinto; Raphael A Manzenreither; Thomas R Burkard; Pawel Sledz; Martin Jinek; Karl Mechtler; Stefan L Ameres
Journal:  EMBO J       Date:  2016-10-11       Impact factor: 11.598

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