Literature DB >> 22975735

The control of elongation by the yeast Ccr4-not complex.

Joseph C Reese1.   

Abstract

The Ccr4-Not complex is a highly conserved nine-subunit protein complex that has been implicated in virtually all aspects of gene control, including transcription, mRNA decay and quality control, RNA export, translational repression and protein ubiquitylation. Understanding its mechanisms of action has been difficult due to the size of the complex and the fact that it regulates mRNAs and proteins at many levels in both the cytoplasm and the nucleus. Recently, biochemical and genetic studies on the yeast Ccr4-Not complex have revealed insights into its role in promoting elongation by RNA polymerase II. This review will describe what is known about the Ccr4-Not complex in regulating transcription elongation and its possible collaboration with other factors traveling with RNAPII across genes. This article is part of a Special Issue entitled: RNA polymerase II Transcript Elongation.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22975735      PMCID: PMC3545033          DOI: 10.1016/j.bbagrm.2012.09.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  79 in total

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4.  Role of Mediator in regulating Pol II elongation and nucleosome displacement in Saccharomyces cerevisiae.

Authors:  Selena B Kremer; Sunyoung Kim; Jeong Ok Jeon; Yara W Moustafa; Apeng Chen; Jing Zhao; David S Gross
Journal:  Genetics       Date:  2012-02-29       Impact factor: 4.562

Review 5.  Ccr4-Not complex: the control freak of eukaryotic cells.

Authors:  Jason E Miller; Joseph C Reese
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-03-15       Impact factor: 8.250

6.  Demethylation of trimethylated histone H3 Lys4 in vivo by JARID1 JmjC proteins.

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Journal:  Nat Struct Mol Biol       Date:  2007-02-18       Impact factor: 15.369

7.  Identification of histone demethylases in Saccharomyces cerevisiae.

Authors:  Shengjiang Tu; Esther M M Bulloch; Lanhao Yang; Chen Ren; Wei-Chieh Huang; Pang-Hung Hsu; Chein-Hung Chen; Chung-Lin Liao; Hui-Ming Yu; Wan-Sheng Lo; Michael A Freitas; Ming-Daw Tsai
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9.  A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization.

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10.  Coupled evolution of transcription and mRNA degradation.

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Journal:  PLoS Biol       Date:  2011-07-19       Impact factor: 8.029

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  24 in total

1.  The Rpb4/7 module of RNA polymerase II is required for carbon catabolite repressor protein 4-negative on TATA (Ccr4-not) complex to promote elongation.

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2.  Ccr4-Not and TFIIS Function Cooperatively To Rescue Arrested RNA Polymerase II.

Authors:  Arnob Dutta; Vinod Babbarwal; Jianhua Fu; Deborah Brunke-Reese; Diane M Libert; Jonathan Willis; Joseph C Reese
Journal:  Mol Cell Biol       Date:  2015-03-16       Impact factor: 4.272

3.  DEF1: Much more than an RNA polymerase degradation factor.

Authors:  Oluwasegun T Akinniyi; Joseph C Reese
Journal:  DNA Repair (Amst)       Date:  2021-08-05

Review 4.  The fate of the messenger is pre-determined: a new model for regulation of gene expression.

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Journal:  Biochim Biophys Acta       Date:  2013-01-19

5.  Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription.

Authors:  Raghuvar Dronamraju; Austin J Hepperla; Yoichiro Shibata; Alexander T Adams; Terry Magnuson; Ian J Davis; Brian D Strahl
Journal:  Mol Cell       Date:  2018-06-21       Impact factor: 17.970

6.  Single-molecule FRET method to investigate the dynamics of transcription elongation through the nucleosome by RNA polymerase II.

Authors:  Jaehyoun Lee; J Brooks Crickard; Joseph C Reese; Tae-Hee Lee
Journal:  Methods       Date:  2019-01-17       Impact factor: 3.608

7.  The Not5 subunit of the ccr4-not complex connects transcription and translation.

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Journal:  PLoS Genet       Date:  2014-10-23       Impact factor: 5.917

8.  Telomeric repeat silencing in germ cells is essential for early development in Drosophila.

Authors:  Valeriya Morgunova; Natalia Akulenko; Elizaveta Radion; Ivan Olovnikov; Yuri Abramov; Ludmila V Olenina; Sergey Shpiz; Daria V Kopytova; Sofia G Georgieva; Alla Kalmykova
Journal:  Nucleic Acids Res       Date:  2015-08-03       Impact factor: 16.971

9.  The prefoldin complex regulates chromatin dynamics during transcription elongation.

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10.  The CCR4-NOT complex mediates deadenylation and degradation of stem cell mRNAs and promotes planarian stem cell differentiation.

Authors:  Jordi Solana; Chiara Gamberi; Yuliana Mihaylova; Stefanie Grosswendt; Chen Chen; Paul Lasko; Nikolaus Rajewsky; A Aziz Aboobaker
Journal:  PLoS Genet       Date:  2013-12-19       Impact factor: 5.917

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