Literature DB >> 34419700

DEF1: Much more than an RNA polymerase degradation factor.

Oluwasegun T Akinniyi1, Joseph C Reese2.   

Abstract

Degradation Factor 1 was discovered 20 years ago as a yeast protein copurifying with Rad26, a helicase involved in transcription-coupled DNA repair. It was subsequently shown to control the ubiquitylation and destruction of the large subunit of DNA damage-arrested RNA Polymerase II. Since that time, much has been learned about Def1's role in polymerase destruction and new functions of the protein have been revealed. We now understand that Def1 is involved in more than just RNA polymerase II regulation. Most of its known functions are associated with maintaining chromosome and genomic integrity, but other exciting activities outside this realm have been suggested. Here we review this fascinating protein, describe its regulation and present a hypothesis that Def1 is a central coordinator of ubiquitin signaling pathways in cells.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DEF1; DNA damage resistance; Degradation factor 1; Protein aggregation; RNA polymerase II; Ubiquitylation

Mesh:

Substances:

Year:  2021        PMID: 34419700      PMCID: PMC8879385          DOI: 10.1016/j.dnarep.2021.103202

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  63 in total

1.  Involvement of the yeast DNA polymerase delta in DNA repair in vivo.

Authors:  L Giot; R Chanet; M Simon; C Facca; G Faye
Journal:  Genetics       Date:  1997-08       Impact factor: 4.562

2.  Def1 interacts with TFIIH and modulates RNA polymerase II transcription.

Authors:  Nivedita Damodaren; Trevor Van Eeuwen; Joanna Zamel; Enrique Lin-Shiao; Nir Kalisman; Kenji Murakami
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-27       Impact factor: 11.205

Review 3.  The control of elongation by the yeast Ccr4-not complex.

Authors:  Joseph C Reese
Journal:  Biochim Biophys Acta       Date:  2012-09-10

4.  A genomic screen in yeast implicates kynurenine 3-monooxygenase as a therapeutic target for Huntington disease.

Authors:  Flaviano Giorgini; Paolo Guidetti; QuangVu Nguyen; Simone C Bennett; Paul J Muchowski
Journal:  Nat Genet       Date:  2005-04-03       Impact factor: 38.330

5.  Distinct mechanisms of mutant huntingtin toxicity in different yeast strains.

Authors:  Genrikh V Serpionov; Alexander I Alexandrov; Michael D Ter-Avanesyan
Journal:  FEMS Yeast Res       Date:  2016-12-02       Impact factor: 2.796

6.  Non-targeted identification of prions and amyloid-forming proteins from yeast and mammalian cells.

Authors:  Dmitry Kryndushkin; Natalia Pripuzova; Barrington G Burnett; Frank Shewmaker
Journal:  J Biol Chem       Date:  2013-08-07       Impact factor: 5.157

7.  Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair.

Authors:  Yuka Nakazawa; Kensaku Sasaki; Norisato Mitsutake; Michiko Matsuse; Mayuko Shimada; Tiziana Nardo; Yoshito Takahashi; Kaname Ohyama; Kosei Ito; Hiroyuki Mishima; Masayo Nomura; Akira Kinoshita; Shinji Ono; Katsuya Takenaka; Ritsuko Masuyama; Takashi Kudo; Hanoch Slor; Atsushi Utani; Satoshi Tateishi; Shunichi Yamashita; Miria Stefanini; Alan R Lehmann; Koh-ichiro Yoshiura; Tomoo Ogi
Journal:  Nat Genet       Date:  2012-05       Impact factor: 38.330

8.  Proteomic screening for amyloid proteins.

Authors:  Anton A Nizhnikov; Alexander I Alexandrov; Tatyana A Ryzhova; Olga V Mitkevich; Alexander A Dergalev; Michael D Ter-Avanesyan; Alexey P Galkin
Journal:  PLoS One       Date:  2014-12-30       Impact factor: 3.240

9.  A systematic survey identifies prions and illuminates sequence features of prionogenic proteins.

Authors:  Simon Alberti; Randal Halfmann; Oliver King; Atul Kapila; Susan Lindquist
Journal:  Cell       Date:  2009-04-03       Impact factor: 41.582

10.  RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6.

Authors:  A J van Gool; R Verhage; S M Swagemakers; P van de Putte; J Brouwer; C Troelstra; D Bootsma; J H Hoeijmakers
Journal:  EMBO J       Date:  1994-11-15       Impact factor: 11.598

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.