Literature DB >> 22969508

4-(4-Fluoro-phen-yl)-3-(pyridin-4-yl)-1-(2,4,6-trichloro-phen-yl)-1H-pyrazol-5-amine.

Bassam Abu Thaher, Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the title compound, C(20)H(12)Cl(3)FN(4), the pyrazole ring forms dihedral angles of 47.51 (9), 47.37 (9) and 74.37 (9)° with the directly attached 4-fluoro-phenyl, pyridine and 2,4,6-trichloro-phenyl rings, respectively. Only one of the two amino H atoms is involved in hydrogen bonding. The crystal packing is characterized by N-H⋯N hydrogen bonds, which result in infinite chains parallel to the c axis.

Entities:  

Year:  2012        PMID: 22969508      PMCID: PMC3435635          DOI: 10.1107/S1600536812033569

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the inhibitory activity and preparation of the title compound, see: Abu Thaher et al. (2012a ▶). For related structures, see: Abu Thaher et al. (2012b ▶,c ▶,d ▶,e ▶).

Experimental

Crystal data

C20H12Cl3FN4 M = 433.69 Triclinic, a = 10.2487 (5) Å b = 10.4643 (5) Å c = 10.5489 (5) Å α = 109.2377 (10)° β = 111.4008 (10)° γ = 98.0304 (11)° V = 950.03 (8) Å3 Z = 2 Mo Kα radiation μ = 0.51 mm−1 T = 173 K 0.33 × 0.28 × 0.07 mm

Data collection

Bruker SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.687, T max = 0.746 21201 measured reflections 4517 independent reflections 3864 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.079 S = 1.03 4517 reflections 253 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033569/bt5984sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033569/bt5984Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812033569/bt5984Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H12Cl3FN4Z = 2
Mr = 433.69F(000) = 440
Triclinic, P1Dx = 1.516 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.2487 (5) ÅCell parameters from 7293 reflections
b = 10.4643 (5) Åθ = 2.2–27.7°
c = 10.5489 (5) ŵ = 0.51 mm1
α = 109.2377 (10)°T = 173 K
β = 111.4008 (10)°Plate, colourless
γ = 98.0304 (11)°0.33 × 0.28 × 0.07 mm
V = 950.03 (8) Å3
Bruker SMART APEXII diffractometer4517 independent reflections
Radiation source: sealed Tube3864 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
CCD scanθmax = 27.8°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −13→13
Tmin = 0.687, Tmax = 0.746k = −13→13
21201 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.079H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0335P)2 + 0.4497P] where P = (Fo2 + 2Fc2)/3
4517 reflections(Δ/σ)max = 0.001
253 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.11579 (4)0.81835 (4)0.49931 (4)0.03113 (10)
Cl20.55419 (4)0.70476 (4)0.42446 (4)0.03333 (10)
Cl30.97212 (5)1.14538 (4)0.90748 (5)0.04454 (13)
F10.50004 (11)−0.13075 (9)−0.22515 (12)0.0397 (2)
N10.79475 (14)0.65783 (12)0.33280 (12)0.0233 (3)
N20.78815 (13)0.68969 (12)0.21373 (12)0.0218 (2)
C30.75032 (15)0.56326 (14)0.10311 (14)0.0195 (3)
C40.73201 (16)0.44990 (14)0.14668 (15)0.0210 (3)
C50.76173 (16)0.51568 (14)0.29651 (15)0.0225 (3)
N60.76393 (17)0.46090 (14)0.39766 (14)0.0333 (3)
H6A0.75760.51260.48160.050*
H6B0.72120.37200.35710.050*
C70.83795 (16)0.77123 (14)0.47287 (14)0.0212 (3)
C80.98371 (16)0.85674 (15)0.55896 (15)0.0220 (3)
C91.02636 (16)0.97336 (15)0.69174 (15)0.0241 (3)
H91.12521.03220.74750.029*
C100.92128 (17)1.00187 (15)0.74088 (16)0.0260 (3)
C110.77596 (17)0.92009 (15)0.66037 (16)0.0258 (3)
H110.70540.94170.69600.031*
C120.73591 (16)0.80573 (15)0.52632 (15)0.0228 (3)
C130.67511 (15)0.29689 (14)0.05054 (15)0.0203 (3)
C140.73867 (17)0.19851 (16)0.09215 (16)0.0261 (3)
H140.82310.23040.18480.031*
C150.67967 (18)0.05394 (16)−0.00078 (18)0.0293 (3)
H150.7226−0.01290.02790.035*
C160.55864 (17)0.01080 (15)−0.13404 (17)0.0274 (3)
C170.49321 (17)0.10325 (16)−0.18119 (16)0.0272 (3)
H170.41020.0701−0.27520.033*
C180.55209 (16)0.24677 (15)−0.08716 (16)0.0235 (3)
H180.50770.3123−0.11720.028*
C190.74226 (15)0.55640 (14)−0.04193 (14)0.0192 (3)
C200.67214 (16)0.63729 (15)−0.10978 (15)0.0224 (3)
H200.62150.6939−0.06720.027*
C210.67723 (17)0.63399 (16)−0.24026 (16)0.0264 (3)
H210.62650.6878−0.28650.032*
N220.74904 (15)0.55985 (14)−0.30536 (14)0.0290 (3)
C230.81503 (18)0.48164 (17)−0.23960 (17)0.0292 (3)
H230.86700.4280−0.28320.035*
C240.81216 (16)0.47424 (15)−0.11190 (16)0.0242 (3)
H240.85740.4138−0.07250.029*
U11U22U33U12U13U23
Cl10.03306 (19)0.0364 (2)0.02770 (18)0.01592 (16)0.01643 (15)0.01189 (16)
Cl20.02807 (19)0.0373 (2)0.02116 (17)−0.00504 (15)0.00680 (14)0.00688 (15)
Cl30.0481 (2)0.0315 (2)0.0318 (2)−0.00855 (18)0.02382 (19)−0.01149 (17)
F10.0488 (6)0.0173 (4)0.0460 (6)0.0034 (4)0.0257 (5)0.0021 (4)
N10.0368 (7)0.0182 (6)0.0127 (5)0.0038 (5)0.0108 (5)0.0058 (4)
N20.0309 (6)0.0211 (6)0.0135 (5)0.0046 (5)0.0100 (5)0.0083 (4)
C30.0231 (6)0.0203 (6)0.0141 (6)0.0052 (5)0.0082 (5)0.0063 (5)
C40.0282 (7)0.0196 (6)0.0153 (6)0.0060 (5)0.0100 (5)0.0073 (5)
C50.0320 (7)0.0190 (6)0.0163 (6)0.0062 (6)0.0109 (6)0.0075 (5)
N60.0631 (9)0.0211 (6)0.0191 (6)0.0100 (6)0.0213 (6)0.0094 (5)
C70.0319 (7)0.0170 (6)0.0127 (6)0.0046 (5)0.0088 (5)0.0061 (5)
C80.0280 (7)0.0227 (7)0.0180 (6)0.0088 (6)0.0109 (5)0.0103 (5)
C90.0259 (7)0.0221 (7)0.0189 (6)0.0022 (6)0.0077 (6)0.0066 (5)
C100.0341 (8)0.0197 (7)0.0177 (6)0.0015 (6)0.0122 (6)0.0020 (5)
C110.0313 (8)0.0238 (7)0.0222 (7)0.0034 (6)0.0158 (6)0.0066 (6)
C120.0257 (7)0.0219 (7)0.0166 (6)0.0000 (5)0.0076 (5)0.0078 (5)
C130.0280 (7)0.0187 (6)0.0176 (6)0.0059 (5)0.0139 (5)0.0072 (5)
C140.0336 (8)0.0258 (7)0.0214 (7)0.0107 (6)0.0127 (6)0.0111 (6)
C150.0410 (9)0.0241 (7)0.0341 (8)0.0150 (7)0.0227 (7)0.0159 (6)
C160.0365 (8)0.0164 (6)0.0309 (8)0.0038 (6)0.0228 (7)0.0045 (6)
C170.0292 (7)0.0242 (7)0.0224 (7)0.0029 (6)0.0113 (6)0.0047 (6)
C180.0281 (7)0.0208 (7)0.0223 (7)0.0073 (6)0.0121 (6)0.0088 (5)
C190.0217 (6)0.0185 (6)0.0135 (6)0.0004 (5)0.0071 (5)0.0050 (5)
C200.0290 (7)0.0210 (7)0.0189 (6)0.0070 (6)0.0128 (6)0.0079 (5)
C210.0360 (8)0.0259 (7)0.0194 (7)0.0083 (6)0.0128 (6)0.0116 (6)
N220.0401 (7)0.0291 (7)0.0199 (6)0.0067 (6)0.0169 (5)0.0098 (5)
C230.0367 (8)0.0301 (8)0.0247 (7)0.0111 (6)0.0194 (6)0.0086 (6)
C240.0285 (7)0.0251 (7)0.0210 (7)0.0091 (6)0.0119 (6)0.0102 (6)
Cl1—C81.7310 (15)C11—H110.9500
Cl2—C121.7266 (15)C13—C181.3969 (19)
Cl3—C101.7289 (14)C13—C141.398 (2)
F1—C161.3677 (16)C14—C151.396 (2)
N1—C51.3649 (18)C14—H140.9500
N1—N21.3833 (16)C15—C161.368 (2)
N1—C71.4170 (16)C15—H150.9500
N2—C31.3310 (17)C16—C171.374 (2)
C3—C41.4190 (19)C17—C181.390 (2)
C3—C191.4788 (18)C17—H170.9500
C4—C51.3921 (18)C18—H180.9500
C4—C131.4730 (18)C19—C241.3918 (19)
C5—N61.3627 (18)C19—C201.3925 (19)
N6—H6A0.9044C20—C211.3857 (19)
N6—H6B0.8528C20—H200.9500
C7—C121.394 (2)C21—N221.339 (2)
C7—C81.399 (2)C21—H210.9500
C8—C91.3856 (19)N22—C231.340 (2)
C9—C101.383 (2)C23—C241.385 (2)
C9—H90.9500C23—H230.9500
C10—C111.383 (2)C24—H240.9500
C11—C121.3872 (19)
C5—N1—N2112.70 (11)C18—C13—C14118.19 (13)
C5—N1—C7128.89 (12)C18—C13—C4119.28 (12)
N2—N1—C7118.37 (11)C14—C13—C4122.54 (13)
C3—N2—N1103.52 (11)C15—C14—C13120.83 (14)
N2—C3—C4112.95 (12)C15—C14—H14119.6
N2—C3—C19118.76 (12)C13—C14—H14119.6
C4—C3—C19128.15 (12)C16—C15—C14118.46 (14)
C5—C4—C3104.41 (12)C16—C15—H15120.8
C5—C4—C13127.41 (13)C14—C15—H15120.8
C3—C4—C13127.71 (12)F1—C16—C15118.68 (14)
N6—C5—N1122.51 (12)F1—C16—C17118.28 (14)
N6—C5—C4131.05 (13)C15—C16—C17123.04 (13)
N1—C5—C4106.42 (12)C16—C17—C18117.99 (14)
C5—N6—H6A120.3C16—C17—H17121.0
C5—N6—H6B113.1C18—C17—H17121.0
H6A—N6—H6B117.0C17—C18—C13121.49 (13)
C12—C7—C8117.70 (12)C17—C18—H18119.3
C12—C7—N1121.29 (13)C13—C18—H18119.3
C8—C7—N1120.93 (13)C24—C19—C20117.29 (12)
C9—C8—C7121.78 (13)C24—C19—C3120.87 (12)
C9—C8—Cl1118.35 (11)C20—C19—C3121.74 (12)
C7—C8—Cl1119.86 (10)C21—C20—C19119.06 (13)
C10—C9—C8118.23 (13)C21—C20—H20120.5
C10—C9—H9120.9C19—C20—H20120.5
C8—C9—H9120.9N22—C21—C20124.20 (14)
C9—C10—C11122.19 (13)N22—C21—H21117.9
C9—C10—Cl3119.16 (11)C20—C21—H21117.9
C11—C10—Cl3118.65 (12)C21—N22—C23116.10 (13)
C10—C11—C12118.28 (14)N22—C23—C24124.00 (14)
C10—C11—H11120.9N22—C23—H23118.0
C12—C11—H11120.9C24—C23—H23118.0
C11—C12—C7121.79 (13)C23—C24—C19119.25 (14)
C11—C12—Cl2118.38 (12)C23—C24—H24120.4
C7—C12—Cl2119.83 (11)C19—C24—H24120.4
C5—N1—N2—C3−0.07 (16)C10—C11—C12—Cl2−179.22 (12)
C7—N1—N2—C3177.83 (12)C8—C7—C12—C11−0.3 (2)
N1—N2—C3—C40.03 (16)N1—C7—C12—C11−177.31 (13)
N1—N2—C3—C19−175.96 (12)C8—C7—C12—Cl2179.62 (11)
N2—C3—C4—C50.02 (17)N1—C7—C12—Cl22.64 (19)
C19—C3—C4—C5175.55 (13)C5—C4—C13—C18127.95 (16)
N2—C3—C4—C13172.59 (13)C3—C4—C13—C18−43.0 (2)
C19—C3—C4—C13−11.9 (2)C5—C4—C13—C14−51.4 (2)
N2—N1—C5—N6178.89 (14)C3—C4—C13—C14137.65 (16)
C7—N1—C5—N61.3 (2)C18—C13—C14—C15−0.7 (2)
N2—N1—C5—C40.09 (17)C4—C13—C14—C15178.67 (14)
C7—N1—C5—C4−177.54 (14)C13—C14—C15—C160.4 (2)
C3—C4—C5—N6−178.73 (16)C14—C15—C16—F1−179.70 (13)
C13—C4—C5—N68.7 (3)C14—C15—C16—C170.6 (2)
C3—C4—C5—N1−0.07 (16)F1—C16—C17—C18179.13 (13)
C13—C4—C5—N1−172.66 (14)C15—C16—C17—C18−1.1 (2)
C5—N1—C7—C12−77.8 (2)C16—C17—C18—C130.8 (2)
N2—N1—C7—C12104.65 (16)C14—C13—C18—C170.1 (2)
C5—N1—C7—C8105.30 (18)C4—C13—C18—C17−179.29 (13)
N2—N1—C7—C8−72.23 (18)N2—C3—C19—C24130.10 (15)
C12—C7—C8—C9−1.0 (2)C4—C3—C19—C24−45.2 (2)
N1—C7—C8—C9175.96 (13)N2—C3—C19—C20−46.22 (19)
C12—C7—C8—Cl1179.43 (11)C4—C3—C19—C20138.48 (15)
N1—C7—C8—Cl1−3.59 (18)C24—C19—C20—C21−1.0 (2)
C7—C8—C9—C101.9 (2)C3—C19—C20—C21175.42 (13)
Cl1—C8—C9—C10−178.53 (11)C19—C20—C21—N22−1.7 (2)
C8—C9—C10—C11−1.5 (2)C20—C21—N22—C232.2 (2)
C8—C9—C10—Cl3179.15 (11)C21—N22—C23—C240.1 (2)
C9—C10—C11—C120.2 (2)N22—C23—C24—C19−2.7 (2)
Cl3—C10—C11—C12179.56 (11)C20—C19—C24—C233.1 (2)
C10—C11—C12—C70.7 (2)C3—C19—C24—C23−173.41 (13)
D—H···AD—HH···AD···AD—H···A
N6—H6A···N22i0.902.173.0275 (17)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N6—H6A⋯N22i 0.902.173.0275 (17)157

Symmetry code: (i) .

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