Literature DB >> 22960595

Imaging translation in single cells using fluorescent microscopy.

Jeffrey A Chao1, Young J Yoon, Robert H Singer.   

Abstract

The regulation of translation provides a mechanism to control not only the abundance of proteins, but also the precise time and subcellular location that they are synthesized. Much of what is known concerning the molecular basis for translational control has been gleaned from experiments (e.g., luciferase assays and polysome analysis) that measure average changes in the protein synthesis of a population of cells, however, mechanistic insights can be obscured in ensemble measurements. The development of fluorescent microscopy techniques and reagents has allowed translation to be studied within its cellular context. Here we highlight recent methodologies that can be used to study global changes in protein synthesis or regulation of specific mRNAs in single cells. Imaging of translation has provided direct evidence for local translation of mRNAs at synapses in neurons and will become an important tool for studying translational control.

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Year:  2012        PMID: 22960595      PMCID: PMC3536344          DOI: 10.1101/cshperspect.a012310

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  69 in total

1.  Dynamic visualization of local protein synthesis in hippocampal neurons.

Authors:  G Aakalu; W B Smith; N Nguyen; C Jiang; E M Schuman
Journal:  Neuron       Date:  2001-05       Impact factor: 17.173

2.  Real-time observation of transcription initiation and elongation on an endogenous yeast gene.

Authors:  Daniel R Larson; Daniel Zenklusen; Bin Wu; Jeffrey A Chao; Robert H Singer
Journal:  Science       Date:  2011-04-22       Impact factor: 47.728

3.  An optical marker based on the UV-induced green-to-red photoconversion of a fluorescent protein.

Authors:  Ryoko Ando; Hiroshi Hama; Miki Yamamoto-Hino; Hideaki Mizuno; Atsushi Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

4.  Regulation of dendritic protein synthesis by miniature synaptic events.

Authors:  Michael A Sutton; Nicholas R Wall; Girish N Aakalu; Erin M Schuman
Journal:  Science       Date:  2004-06-25       Impact factor: 47.728

5.  RNA dynamics in live Escherichia coli cells.

Authors:  Ido Golding; Edward C Cox
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-26       Impact factor: 11.205

6.  FACS-based selection of tandem tetracysteine peptides with improved ReAsH brightness in live cells.

Authors:  Schuyler B Van Engelenburg; Theresa Nahreini; Amy E Palmer
Journal:  Chembiochem       Date:  2010-03-01       Impact factor: 3.164

7.  Transcriptional pulsing of a developmental gene.

Authors:  Jonathan R Chubb; Tatjana Trcek; Shailesh M Shenoy; Robert H Singer
Journal:  Curr Biol       Date:  2006-05-23       Impact factor: 10.834

8.  Quantitative single cell monitoring of protein synthesis at subcellular resolution using fluorescently labeled tRNA.

Authors:  Sima Barhoom; Jaskiran Kaur; Barry S Cooperman; Nechama I Smorodinsky; Zeev Smilansky; Marcelo Ehrlich; Orna Elroy-Stein
Journal:  Nucleic Acids Res       Date:  2011-07-27       Impact factor: 16.971

9.  Visualization of mRNA translation in living cells.

Authors:  Alexis J Rodriguez; Shailesh M Shenoy; Robert H Singer; John Condeelis
Journal:  J Cell Biol       Date:  2006-10-09       Impact factor: 10.539

10.  Hairpin structure of a biarsenical-tetracysteine motif determined by NMR spectroscopy.

Authors:  Fatemeh Madani; Jesper Lind; Peter Damberg; Stephen R Adams; Roger Y Tsien; Astrid O Gräslund
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

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  17 in total

Review 1.  The skeletal muscle fiber: a mechanically sensitive cell.

Authors:  Luke A Olsen; Justin X Nicoll; Andrew C Fry
Journal:  Eur J Appl Physiol       Date:  2019-01-05       Impact factor: 3.078

Review 2.  Principles of translational control: an overview.

Authors:  John W B Hershey; Nahum Sonenberg; Michael B Mathews
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

Review 3.  Recent advances in high-performance fluorescent and bioluminescent RNA imaging probes.

Authors:  Yuqiong Xia; Ruili Zhang; Zhongliang Wang; Jie Tian; Xiaoyuan Chen
Journal:  Chem Soc Rev       Date:  2017-05-22       Impact factor: 54.564

4.  Enhanced fluorescence emitted by microdroplets containing organic dye emulsions.

Authors:  M Boni; V Nastasa; I R Andrei; Angela Staicu; M L Pascu
Journal:  Biomicrofluidics       Date:  2015-02-24       Impact factor: 2.800

5.  Glutamate-induced RNA localization and translation in neurons.

Authors:  Young J Yoon; Bin Wu; Adina R Buxbaum; Sulagna Das; Albert Tsai; Brian P English; Jonathan B Grimm; Luke D Lavis; Robert H Singer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

Review 6.  Lighting up single-mRNA translation dynamics in living cells.

Authors:  Charlotte A Cialek; Amanda L Koch; Gabriel Galindo; Timothy J Stasevich
Journal:  Curr Opin Genet Dev       Date:  2020-05-11       Impact factor: 5.578

7.  Translation. An RNA biosensor for imaging the first round of translation from single cells to living animals.

Authors:  James M Halstead; Timothée Lionnet; Johannes H Wilbertz; Frank Wippich; Anne Ephrussi; Robert H Singer; Jeffrey A Chao
Journal:  Science       Date:  2015-03-20       Impact factor: 47.728

Review 8.  Imaging Translational and Post-Translational Gene Regulatory Dynamics in Living Cells with Antibody-Based Probes.

Authors:  Kenneth Lyon; Timothy J Stasevich
Journal:  Trends Genet       Date:  2017-03-27       Impact factor: 11.639

9.  Light microscopy applications in systems biology: opportunities and challenges.

Authors:  Paul Michel Aloyse Antony; Christophe Trefois; Aleksandar Stojanovic; Aidos Sagatovich Baumuratov; Karol Kozak
Journal:  Cell Commun Signal       Date:  2013-04-11       Impact factor: 5.712

Review 10.  The central dogma decentralized: new perspectives on RNA function and local translation in neurons.

Authors:  Christine E Holt; Erin M Schuman
Journal:  Neuron       Date:  2013-10-30       Impact factor: 17.173

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