Literature DB >> 22945852

Analytical glycobiology at high sensitivity: current approaches and directions.

Milos V Novotny1, William R Alley, Benjamin F Mann.   

Abstract

This review summarizes the analytical advances made during the last several years in the structural and quantitative determinations of glycoproteins in complex biological mixtures. The main analytical techniques used in the fields of glycomics and glycoproteomics involve different modes of mass spectrometry and their combinations with capillary separation methods such as microcolumn liquid chromatography and capillary electrophoresis. The need for high-sensitivity measurements have been emphasized in the oligosaccharide profiling used in the field of biomarker discovery through MALDI mass spectrometry. High-sensitivity profiling of both glycans and glycopeptides from biological fluids and tissue extracts has been aided significantly through lectin preconcentration and the uses of affinity chromatography.

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Year:  2012        PMID: 22945852      PMCID: PMC3586546          DOI: 10.1007/s10719-012-9444-8

Source DB:  PubMed          Journal:  Glycoconj J        ISSN: 0282-0080            Impact factor:   2.916


  220 in total

1.  Activated ion electron capture dissociation for mass spectral sequencing of larger (42 kDa) proteins.

Authors:  D M Horn; Y Ge; F W McLafferty
Journal:  Anal Chem       Date:  2000-10-15       Impact factor: 6.986

2.  Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

Authors:  Danielle L Swaney; Graeme C McAlister; Matthew Wirtala; Jae C Schwartz; John E P Syka; Joshua J Coon
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

3.  Structure of the lipophosphoglycan from Leishmania major.

Authors:  M J McConville; J E Thomas-Oates; M A Ferguson; S W Homans
Journal:  J Biol Chem       Date:  1990-11-15       Impact factor: 5.157

4.  Alterations in the serum glycome due to metastatic prostate cancer.

Authors:  Zuzana Kyselova; Yehia Mechref; Mohammad M Al Bataineh; Lacey E Dobrolecki; Robert J Hickey; Jake Vinson; Christopher J Sweeney; Milos V Novotny
Journal:  J Proteome Res       Date:  2007-04-14       Impact factor: 4.466

Review 5.  The acute phase protein alpha1-acid glycoprotein: a model for altered glycosylation during diseases.

Authors:  Fabrizio Ceciliani; Vanessa Pocacqua
Journal:  Curr Protein Pept Sci       Date:  2007-02       Impact factor: 3.272

6.  Evolutionary differences in glycosaminoglycan fine structure detected by quantitative glycan reductive isotope labeling.

Authors:  Roger Lawrence; Sara K Olson; Robert E Steele; Lianchun Wang; Rahul Warrior; Richard D Cummings; Jeffrey D Esko
Journal:  J Biol Chem       Date:  2008-09-24       Impact factor: 5.157

7.  Resolving and assigning N-linked glycan structural isomers from ovalbumin by IMS-MS.

Authors:  Manolo D Plasencia; Dragan Isailovic; Samuel I Merenbloom; Yehia Mechref; Milos V Novotny; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2008-07-31       Impact factor: 3.109

8.  Elucidation of O-glycosylation structures of the beta-amyloid precursor protein by liquid chromatography-mass spectrometry using electron transfer dissociation and collision induced dissociation.

Authors:  Irina Perdivara; Robert Petrovich; Bernadette Allinquant; Bernadette Alliquant; Leesa J Deterding; Kenneth B Tomer; Michael Przybylski
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

9.  Elimination of oxidative degradation during the per-O-methylation of carbohydrates.

Authors:  Ionel Ciucanu; Catherine E Costello
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

Review 10.  Protein glycosylation in bacterial mucosal pathogens.

Authors:  Christine M Szymanski; Brendan W Wren
Journal:  Nat Rev Microbiol       Date:  2005-03       Impact factor: 60.633

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  19 in total

Review 1.  Recent Advances in the Analysis of Complex Glycoproteins.

Authors:  Stefan Gaunitz; Gabe Nagy; Nicola L B Pohl; Milos V Novotny
Journal:  Anal Chem       Date:  2016-11-23       Impact factor: 6.986

2.  Complementary Glycomic Analyses of Sera Derived from Colorectal Cancer Patients by MALDI-TOF-MS and Microchip Electrophoresis.

Authors:  Christa M Snyder; William R Alley; Margit I Campos; Martin Svoboda; John A Goetz; Jaqueline A Vasseur; Stephen C Jacobson; Milos V Novotny
Journal:  Anal Chem       Date:  2016-09-13       Impact factor: 6.986

3.  Recent Liquid Chromatographic Approaches and Developments for the Separation and Purification of Carbohydrates.

Authors:  Gabe Nagy; Tianyuan Peng; Nicola L B Pohl
Journal:  Anal Methods       Date:  2017-05-24       Impact factor: 2.896

Review 4.  Application of microarrays for deciphering the structure and function of the human glycome.

Authors:  David F Smith; Richard D Cummings
Journal:  Mol Cell Proteomics       Date:  2013-02-14       Impact factor: 5.911

Review 5.  Recent trends in analytical and structural glycobiology.

Authors:  Milos V Novotny; William R Alley
Journal:  Curr Opin Chem Biol       Date:  2013-06-18       Impact factor: 8.822

6.  Isolation and purification of glycoconjugates from complex biological sources by recycling high-performance liquid chromatography.

Authors:  William R Alley; Benjamin F Mann; Vlastimil Hruska; Milos V Novotny
Journal:  Anal Chem       Date:  2013-10-18       Impact factor: 6.986

7.  Smoking and lung cancer-induced changes in N-glycosylation of blood serum proteins.

Authors:  Jacqueline A Vasseur; John A Goetz; William R Alley; Milos V Novotny
Journal:  Glycobiology       Date:  2012-07-09       Impact factor: 4.313

Review 8.  Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.

Authors:  Haopeng Xiao; Fangxu Sun; Suttipong Suttapitugsakul; Ronghu Wu
Journal:  Mass Spectrom Rev       Date:  2019-01-03       Impact factor: 10.946

9.  Interlaboratory study on differential analysis of protein glycosylation by mass spectrometry: the ABRF glycoprotein research multi-institutional study 2012.

Authors:  Nancy Leymarie; Paula J Griffin; Karen Jonscher; Daniel Kolarich; Ron Orlando; Mark McComb; Joseph Zaia; Jennifer Aguilan; William R Alley; Friederich Altmann; Lauren E Ball; Lipika Basumallick; Carthene R Bazemore-Walker; Henning Behnken; Michael A Blank; Kristy J Brown; Svenja-Catharina Bunz; Christopher W Cairo; John F Cipollo; Rambod Daneshfar; Heather Desaire; Richard R Drake; Eden P Go; Radoslav Goldman; Clemens Gruber; Adnan Halim; Yetrib Hathout; Paul J Hensbergen; David M Horn; Deanna Hurum; Wolfgang Jabs; Göran Larson; Mellisa Ly; Benjamin F Mann; Kristina Marx; Yehia Mechref; Bernd Meyer; Uwe Möginger; Christian Neusüβ; Jonas Nilsson; Milos V Novotny; Julius O Nyalwidhe; Nicolle H Packer; Petr Pompach; Bela Reiz; Anja Resemann; Jeffrey S Rohrer; Alexandra Ruthenbeck; Miloslav Sanda; Jan Mirco Schulz; Ulrike Schweiger-Hufnagel; Carina Sihlbom; Ehwang Song; Gregory O Staples; Detlev Suckau; Haixu Tang; Morten Thaysen-Andersen; Rosa I Viner; Yanming An; Leena Valmu; Yoshinao Wada; Megan Watson; Markus Windwarder; Randy Whittal; Manfred Wuhrer; Yiying Zhu; Chunxia Zou
Journal:  Mol Cell Proteomics       Date:  2013-06-13       Impact factor: 5.911

Review 10.  Chemical Glycoproteomics.

Authors:  Krishnan K Palaniappan; Carolyn R Bertozzi
Journal:  Chem Rev       Date:  2016-11-18       Impact factor: 60.622

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