Literature DB >> 23790311

Recent trends in analytical and structural glycobiology.

Milos V Novotny1, William R Alley.   

Abstract

The great complexity of glycosylated biomolecules necessitates a set of powerful analytical methodologies to reveal functionally important structural features. Mass spectrometry (MS), with its different ionization techniques, mass analyzers, and detection strategies, has become the most important analytical method in glycomic and glycoproteomic investigations. In combination with MS, microscale separations (based on capillary chromatography and electrophoresis) and carbohydrate microchemistry, we feature here conceptually important applications of the recent years. This review focuses on methodological advances pertaining to disease biomarker research, immunology, developmental biology, and measurements of importance to biopharmaceuticals. High-sensitivity determinations and sample enrichment/preconcentration are particularly emphasized in glycomic and glycoproteomic profiling.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23790311      PMCID: PMC3823762          DOI: 10.1016/j.cbpa.2013.05.029

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  72 in total

1.  Structures of the CCR5 N terminus and of a tyrosine-sulfated antibody with HIV-1 gp120 and CD4.

Authors:  Chih-Chin Huang; Son N Lam; Priyamvada Acharya; Min Tang; Shi-Hua Xiang; Syed Shahzad-Ul Hussan; Robyn L Stanfield; James Robinson; Joseph Sodroski; Ian A Wilson; Richard Wyatt; Carole A Bewley; Peter D Kwong
Journal:  Science       Date:  2007-09-28       Impact factor: 47.728

2.  Characterization of glycoprotein digests with hydrophilic interaction chromatography and mass spectrometry.

Authors:  Martin Gilar; Ying-Qing Yu; Joomi Ahn; Hongwei Xie; Huanhuan Han; Wantao Ying; Xiaohong Qian
Journal:  Anal Biochem       Date:  2011-05-27       Impact factor: 3.365

3.  Quantitative N-linked glycoproteomics of myocardial ischemia and reperfusion injury reveals early remodeling in the extracellular environment.

Authors:  Benjamin L Parker; Giuseppe Palmisano; Alistair V G Edwards; Melanie Y White; Kasper Engholm-Keller; Albert Lee; Nichollas E Scott; Daniel Kolarich; Brett D Hambly; Nicolle H Packer; Martin R Larsen; Stuart J Cordwell
Journal:  Mol Cell Proteomics       Date:  2011-03-25       Impact factor: 5.911

4.  Mass spectrometric assay for analysis of haptoglobin fucosylation in pancreatic cancer.

Authors:  Zhenxin Lin; Diane M Simeone; Michelle A Anderson; Randall E Brand; Xiaolei Xie; Kerby A Shedden; Mack T Ruffin; David M Lubman
Journal:  J Proteome Res       Date:  2011-03-31       Impact factor: 4.466

5.  Microchip electrophoresis of N-glycans on serpentine separation channels with asymmetrically tapered turns.

Authors:  Zexi Zhuang; Indranil Mitra; Ahmed Hussein; Milos V Novotny; Yehia Mechref; Stephen C Jacobson
Journal:  Electrophoresis       Date:  2011-01       Impact factor: 3.535

6.  Novel glycan biomarkers for the detection of lung cancer.

Authors:  James N Arnold; Radka Saldova; Marie C Galligan; Thomas B Murphy; Yuka Mimura-Kimura; Jayne E Telford; Andrew K Godwin; Pauline M Rudd
Journal:  J Proteome Res       Date:  2011-03-16       Impact factor: 4.466

7.  Ion mobility mass spectrometry for extracting spectra of N-glycans directly from incubation mixtures following glycan release: application to glycans from engineered glycoforms of intact, folded HIV gp120.

Authors:  David J Harvey; Frank Sobott; Max Crispin; Antoni Wrobel; Camille Bonomelli; Snezana Vasiljevic; Christopher N Scanlan; Charlotte A Scarff; Konstantinos Thalassinos; James H Scrivens
Journal:  J Am Soc Mass Spectrom       Date:  2011-02-08       Impact factor: 3.109

8.  Copper-free click chemistry for dynamic in vivo imaging.

Authors:  Jeremy M Baskin; Jennifer A Prescher; Scott T Laughlin; Nicholas J Agard; Pamela V Chang; Isaac A Miller; Anderson Lo; Julian A Codelli; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-17       Impact factor: 11.205

9.  On-line LC-MS approach combining collision-induced dissociation (CID), electron-transfer dissociation (ETD), and CID of an isolated charge-reduced species for the trace-level characterization of proteins with post-translational modifications.

Authors:  Shiaw-Lin Wu; Andreas F R Hühmer; Zhiqi Hao; Barry L Karger
Journal:  J Proteome Res       Date:  2007-09-28       Impact factor: 4.466

10.  In vivo imaging of membrane-associated glycans in developing zebrafish.

Authors:  Scott T Laughlin; Jeremy M Baskin; Sharon L Amacher; Carolyn R Bertozzi
Journal:  Science       Date:  2008-05-02       Impact factor: 47.728

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  18 in total

Review 1.  Recent Advances in the Analysis of Complex Glycoproteins.

Authors:  Stefan Gaunitz; Gabe Nagy; Nicola L B Pohl; Milos V Novotny
Journal:  Anal Chem       Date:  2016-11-23       Impact factor: 6.986

2.  Study of structure-dependent chromatographic behavior of glycopeptides using reversed phase nanoLC.

Authors:  Petr Kozlik; Radoslav Goldman; Miloslav Sanda
Journal:  Electrophoresis       Date:  2017-05-17       Impact factor: 3.535

3.  Recent Liquid Chromatographic Approaches and Developments for the Separation and Purification of Carbohydrates.

Authors:  Gabe Nagy; Tianyuan Peng; Nicola L B Pohl
Journal:  Anal Methods       Date:  2017-05-24       Impact factor: 2.896

4.  Precursor ion survival energies of protonated N-glycopeptides and their weak dependencies on high mannose N-glycan composition in collision-induced dissociation.

Authors:  Forouzan Aboufazeli; Eric D Dodds
Journal:  Analyst       Date:  2018-09-10       Impact factor: 4.616

5.  Parallel Determination of Polypeptide and Oligosaccharide Connectivities by Energy-Resolved Collison-Induced Dissociation of Protonated O-Glycopeptides Derived from Nonspecific Proteolysis.

Authors:  Maia I Kelly; Eric D Dodds
Journal:  J Am Soc Mass Spectrom       Date:  2020-02-21       Impact factor: 3.109

6.  Highly Sensitive O-Glycan Profiling for Human Serum Proteins Reveals Gender-Dependent Changes in Colorectal Cancer Patients.

Authors:  Solomon T Gizaw; Stefan Gaunitz; Milos V Novotny
Journal:  Anal Chem       Date:  2019-04-24       Impact factor: 6.986

7.  A High-Throughput Mass-Spectrometry-Based Assay for Identifying the Biochemical Functions of Putative Glycosidases.

Authors:  Tianyuan Peng; Gabe Nagy; Jonathan C Trinidad; Joy Marie Jackson; Nicola L B Pohl
Journal:  Chembiochem       Date:  2017-10-27       Impact factor: 3.164

8.  Analytical Scheme Leading to Integrated High-Sensitivity Profiling of Glycosphingolipids Together with N- and O-Glycans from One Sample.

Authors:  John D Benktander; Solomon T Gizaw; Stefan Gaunitz; Milos V Novotny
Journal:  J Am Soc Mass Spectrom       Date:  2018-05-09       Impact factor: 3.109

Review 9.  Electrochemistry of nonconjugated proteins and glycoproteins. Toward sensors for biomedicine and glycomics.

Authors:  Emil Paleček; Jan Tkáč; Martin Bartošík; Tomáš Bertók; Veronika Ostatná; Jan Paleček
Journal:  Chem Rev       Date:  2015-02-09       Impact factor: 60.622

10.  Can glycoprofiling be helpful in detecting prostate cancer?

Authors:  Štefan Belický; Jan Tkac
Journal:  Chem Zvesti       Date:  2014-11-28       Impact factor: 2.097

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