Literature DB >> 22926412

Recent progress in intein research: from mechanism to directed evolution and applications.

Gerrit Volkmann1, Henning D Mootz.   

Abstract

Inteins catalyze a post-translational modification known as protein splicing, where the intein removes itself from a precursor protein and concomitantly ligates the flanking protein sequences with a peptide bond. Over the past two decades, inteins have risen from a peculiarity to a rich source of applications in biotechnology, biomedicine, and protein chemistry. In this review, we focus on developments of intein-related research spanning the last 5 years, including the three different splicing mechanisms and their molecular underpinnings, the directed evolution of inteins towards improved splicing in exogenous protein contexts, as well as novel applications of inteins for cell biology and protein engineering, which were made possible by a clearer understanding of the protein splicing mechanism.

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Year:  2012        PMID: 22926412     DOI: 10.1007/s00018-012-1120-4

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  136 in total

1.  Characteristics of protein splicing in trans mediated by a semisynthetic split intein.

Authors:  B M Lew; K V Mills; H Paulus
Journal:  Biopolymers       Date:  1999       Impact factor: 2.505

2.  Spontaneous proton transfer to a conserved intein residue determines on-pathway protein splicing.

Authors:  Brian Pereira; Philip T Shemella; Gil Amitai; Georges Belfort; Saroj K Nayak; Marlene Belfort
Journal:  J Mol Biol       Date:  2010-12-23       Impact factor: 5.469

3.  Novel split intein for trans-splicing synthetic peptide onto C terminus of protein.

Authors:  Julia H Appleby; Kaisong Zhou; Gerrit Volkmann; Xiang-Qin Liu
Journal:  J Biol Chem       Date:  2009-01-09       Impact factor: 5.157

4.  Semisynthesis of cytotoxic proteins using a modified protein splicing element.

Authors:  T C Evans; J Benner; M Q Xu
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

5.  The mechanism of protein splicing and its modulation by mutation.

Authors:  M Q Xu; F B Perler
Journal:  EMBO J       Date:  1996-10-01       Impact factor: 11.598

6.  The Thermococcus kodakaraensis Tko CDC21-1 intein activates its N-terminal splice junction in the absence of a conserved histidine by a compensatory mechanism.

Authors:  Kazuo Tori; Manoj Cheriyan; Chandra Sekhar Pedamallu; Marleny A Contreras; Francine B Perler
Journal:  Biochemistry       Date:  2012-03-13       Impact factor: 3.162

7.  Protein splicing: estimation of the rate of O-N and S-N acyl rearrangements, the last step of the splicing process.

Authors:  Y Shao; H Paulus
Journal:  J Pept Res       Date:  1997-09

8.  Protein trans-splicing in transgenic plant chloroplast: reconstruction of herbicide resistance from split genes.

Authors:  Hang Gyeong Chin; Gun-Do Kim; Ivan Marin; Fana Mersha; Thomas C Evans; Lixin Chen; Ming-Qun Xu; Sriharsa Pradhan
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-01       Impact factor: 11.205

9.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

10.  NMR and crystal structures of the Pyrococcus horikoshii RadA intein guide a strategy for engineering a highly efficient and promiscuous intein.

Authors:  Jesper S Oeemig; Dongwen Zhou; Tommi Kajander; Alexander Wlodawer; Hideo Iwaï
Journal:  J Mol Biol       Date:  2012-05-02       Impact factor: 5.469

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  39 in total

1.  Efficient Generation of Hydrazides in Proteins by RadA Split Intein.

Authors:  Jun Liu; Oshini Ekanayake; Dominic Santoleri; Kelsi Walker; Sharon Rozovsky
Journal:  Chembiochem       Date:  2019-10-11       Impact factor: 3.164

2.  A mesophilic cysteine-less split intein for protein trans-splicing applications under oxidizing conditions.

Authors:  Maniraj Bhagawati; Tobias M E Terhorst; Friederike Füsser; Simon Hoffmann; Tim Pasch; Shmuel Pietrokovski; Henning D Mootz
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-14       Impact factor: 11.205

Review 3.  Thiol-based redox switches.

Authors:  Bastian Groitl; Ursula Jakob
Journal:  Biochim Biophys Acta       Date:  2014-03-19

4.  Inteins: Nature's Gift to Protein Chemists.

Authors:  Neel H Shah; Tom W Muir
Journal:  Chem Sci       Date:  2014       Impact factor: 9.825

Review 5.  Structural and dynamical features of inteins and implications on protein splicing.

Authors:  Ertan Eryilmaz; Neel H Shah; Tom W Muir; David Cowburn
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

Review 6.  Enigmatic distribution, evolution, and function of inteins.

Authors:  Olga Novikova; Natalya Topilina; Marlene Belfort
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

Review 7.  Biotechnological Applications of Protein Splicing.

Authors:  Corina Sarmiento; Julio A Camarero
Journal:  Curr Protein Pept Sci       Date:  2019       Impact factor: 3.272

Review 8.  A molecular engineering toolbox for the structural biologist.

Authors:  Galia T Debelouchina; Tom W Muir
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

9.  Arginyltransferase ATE1 catalyzes midchain arginylation of proteins at side chain carboxylates in vivo.

Authors:  Junling Wang; Xuemei Han; Catherine C L Wong; Hong Cheng; Aaron Aslanian; Tao Xu; Paul Leavis; Heinrich Roder; Lizbeth Hedstrom; John R Yates; Anna Kashina
Journal:  Chem Biol       Date:  2014-02-13

10.  Cyclin-dependent kinase 4 may be expressed as multiple proteins and have functions that are independent of binding to CCND and RB and occur at the S and G 2/M phases of the cell cycle.

Authors:  Yuan Sun; Xiaomin Lou; Min Yang; Chengfu Yuan; Ling Ma; Bing-Kun Xie; Jian-Min Wu; Wei Yang; Steven Xj Shen; Ningzhi Xu; D Joshua Liao
Journal:  Cell Cycle       Date:  2013-09-24       Impact factor: 4.534

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