Literature DB >> 22917516

Complexity in the wiring and regulation of plant circadian networks.

Dawn H Nagel1, Steve A Kay.   

Abstract

Endogenous circadian rhythms regulate many aspects of an organism's behavior, physiology and development. These daily oscillations synchronize with the environment to generate robust rhythms, resulting in enhanced fitness and growth vigor in plants. Collective studies over the years have focused on understanding the transcription-based oscillator in Arabidopsis. Recent advances combining mechanistic data with genome-wide approaches have contributed significantly to a more comprehensive understanding of the molecular interactions within the oscillator, and with clock-controlled pathways. This review focuses on the regulatory mechanisms within the oscillator, highlighting key connections between new and existing components, and direct mechanistic links to downstream pathways that control overt rhythms in the whole plant.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22917516      PMCID: PMC3427731          DOI: 10.1016/j.cub.2012.07.025

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  116 in total

1.  A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene.

Authors:  Z Y Wang; D Kenigsbuch; L Sun; E Harel; M S Ong; E M Tobin
Journal:  Plant Cell       Date:  1997-04       Impact factor: 11.277

2.  Circadian clock mutants in Arabidopsis identified by luciferase imaging.

Authors:  A J Millar; I A Carré; C A Strayer; N H Chua; S A Kay
Journal:  Science       Date:  1995-02-24       Impact factor: 47.728

3.  Phase-specific circadian clock regulatory elements in Arabidopsis.

Authors:  Todd P Michael; C Robertson McClung
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

4.  The circadian clock that controls gene expression in Arabidopsis is tissue specific.

Authors:  Simon C Thain; Giovanni Murtas; James R Lynn; Robert B McGrath; Andrew J Millar
Journal:  Plant Physiol       Date:  2002-09       Impact factor: 8.340

5.  Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana.

Authors:  Paloma Más; Woe-Yeon Kim; David E Somers; Steve A Kay
Journal:  Nature       Date:  2003-12-04       Impact factor: 49.962

6.  CK2 phosphorylation of CCA1 is necessary for its circadian oscillator function in Arabidopsis.

Authors:  Xavier Daniel; Shoji Sugano; Elaine M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-20       Impact factor: 11.205

7.  Circadian-controlled basic/helix-loop-helix factor, PIL6, implicated in light-signal transduction in Arabidopsis thaliana.

Authors:  Toru Fujimori; Takafumi Yamashino; Takahiko Kato; Takeshi Mizuno
Journal:  Plant Cell Physiol       Date:  2004-08       Impact factor: 4.927

8.  A role for casein kinase 2alpha in the Drosophila circadian clock.

Authors:  Jui-Ming Lin; Valerie L Kilman; Kevin Keegan; Brie Paddock; Myai Emery-Le; Michael Rosbash; Ravi Allada
Journal:  Nature       Date:  2002 Dec 19-26       Impact factor: 49.962

9.  The evolutionarily conserved OsPRR quintet: rice pseudo-response regulators implicated in circadian rhythm.

Authors:  Masaya Murakami; Motoyuki Ashikari; Kotaro Miura; Takafumi Yamashino; Takeshi Mizuno
Journal:  Plant Cell Physiol       Date:  2003-11       Impact factor: 4.927

10.  Photoreceptor regulation of CONSTANS protein in photoperiodic flowering.

Authors:  Federico Valverde; Aidyn Mouradov; Wim Soppe; Dean Ravenscroft; Alon Samach; George Coupland
Journal:  Science       Date:  2004-02-13       Impact factor: 47.728

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  113 in total

1.  Evening expression of arabidopsis GIGANTEA is controlled by combinatorial interactions among evolutionarily conserved regulatory motifs.

Authors:  Markus C Berns; Karl Nordström; Frédéric Cremer; Réka Tóth; Martin Hartke; Samson Simon; Jonas R Klasen; Ingmar Bürstel; George Coupland
Journal:  Plant Cell       Date:  2014-10-31       Impact factor: 11.277

2.  Tissue-specific clocks in Arabidopsis show asymmetric coupling.

Authors:  Motomu Endo; Hanako Shimizu; Maria A Nohales; Takashi Araki; Steve A Kay
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

3.  The Circadian Clock Modulates Global Daily Cycles of mRNA Ribosome Loading.

Authors:  Anamika Missra; Ben Ernest; Tim Lohoff; Qidong Jia; James Satterlee; Kenneth Ke; Albrecht G von Arnim
Journal:  Plant Cell       Date:  2015-09-21       Impact factor: 11.277

4.  AtHESPERIN: a novel regulator of circadian rhythms with poly(A)-degrading activity in plants.

Authors:  Costas Delis; Afrodite Krokida; Anastasia Tomatsidou; Daniela Tsikou; Rafailia A A Beta; Maria Tsioumpekou; Julietta Moustaka; Georgios Stravodimos; Demetres D Leonidas; Nikolaos A A Balatsos; Kalliope K Papadopoulou
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

Review 5.  Dynamics of H3K27me3 methylation and demethylation in plant development.

Authors:  Eng-Seng Gan; Yifeng Xu; Toshiro Ito
Journal:  Plant Signal Behav       Date:  2015

Review 6.  Genomic and epigenetic insights into the molecular bases of heterosis.

Authors:  Z Jeffrey Chen
Journal:  Nat Rev Genet       Date:  2013-06-11       Impact factor: 53.242

7.  FAR-RED ELONGATED HYPOCOTYL3 promotes floral meristem determinacy in Arabidopsis.

Authors:  Luping Liu; Bo Li; Xigang Liu
Journal:  Plant Signal Behav       Date:  2016-10-02

8.  Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis.

Authors:  Sunghyun Hong; Sun A Kim; Mary Lou Guerinot; C Robertson McClung
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

9.  The Arabidopsis sickle Mutant Exhibits Altered Circadian Clock Responses to Cool Temperatures and Temperature-Dependent Alternative Splicing.

Authors:  Carine M Marshall; Virginia Tartaglio; Maritza Duarte; Frank G Harmon
Journal:  Plant Cell       Date:  2016-09-13       Impact factor: 11.277

10.  Changes in the Common Bean Transcriptome in Response to Secreted and Surface Signal Molecules of Rhizobium etli.

Authors:  Virginia Dalla Via; Candela Narduzzi; Orlando Mario Aguilar; María Eugenia Zanetti; Flavio Antonio Blanco
Journal:  Plant Physiol       Date:  2015-08-17       Impact factor: 8.340

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