Literature DB >> 26313233

Dynamics of H3K27me3 methylation and demethylation in plant development.

Eng-Seng Gan1,2, Yifeng Xu1, Toshiro Ito1,2.   

Abstract

Epigenetic regulation controls multiple aspects of the plant development. The N-terminal tail of histone can be differently modified to regulate various chromatin activities. One of them, the trimethylation of histone H3 lysine 27 (H3K27me3) confers a repressive chromatin state with gene silencing. H3K27me3 is dynamically deposited and removed throughout development. While components of the H3K27me3 writer, Polycomb repressive complex 2 (PRC2), have been reported for almost 2 decades, it is only recently that JUMONJI (JMJ) proteins are reported as H3K27me3 demethylases, affirming the dynamic nature of histone modifications. This review highlights recent progress in plant epigenetic research, focusing on the H3K27me3 demethylases.

Entities:  

Keywords:  Arabidopsis; H3K27me3; demethylation; epigenetics; flowering time; histone; methylation

Mesh:

Substances:

Year:  2015        PMID: 26313233      PMCID: PMC4883920          DOI: 10.1080/15592324.2015.1027851

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  68 in total

1.  JmjC-domain-containing proteins and histone demethylation.

Authors:  Robert J Klose; Eric M Kallin; Yi Zhang
Journal:  Nat Rev Genet       Date:  2006-09       Impact factor: 53.242

2.  Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice.

Authors:  Falong Lu; Guanglin Li; Xia Cui; Chunyan Liu; Xiu-Jie Wang; Xiaofeng Cao
Journal:  J Integr Plant Biol       Date:  2008-07       Impact factor: 7.061

3.  JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis.

Authors:  Falong Lu; Xia Cui; Shuaibin Zhang; Chunyan Liu; Xiaofeng Cao
Journal:  Cell Res       Date:  2010-02-23       Impact factor: 25.617

4.  A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis.

Authors:  Wannian Yang; Danhua Jiang; Jiafu Jiang; Yuehui He
Journal:  Plant J       Date:  2010-02-24       Impact factor: 6.417

5.  Methylation of H3-lysine 79 is mediated by a new family of HMTases without a SET domain.

Authors:  Qin Feng; Hengbin Wang; Huck Hui Ng; Hediye Erdjument-Bromage; Paul Tempst; Kevin Struhl; Yi Zhang
Journal:  Curr Biol       Date:  2002-06-25       Impact factor: 10.834

6.  Resetting and regulation of Flowering Locus C expression during Arabidopsis reproductive development.

Authors:  Jean Choi; Youbong Hyun; Min-Jeong Kang; Hye In Yun; Jae-Young Yun; Clare Lister; Caroline Dean; Richard M Amasino; Bosl Noh; Yoo-Sun Noh; Yeonhee Choi
Journal:  Plant J       Date:  2009-01-17       Impact factor: 6.417

Review 7.  The Polycomb complex PRC2 and its mark in life.

Authors:  Raphaël Margueron; Danny Reinberg
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

8.  Redundant regulation of meristem identity and plant architecture by FRUITFULL, APETALA1 and CAULIFLOWER.

Authors:  C Ferrándiz; Q Gu; R Martienssen; M F Yanofsky
Journal:  Development       Date:  2000-02       Impact factor: 6.868

9.  A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression.

Authors:  Hongchun Yang; Zhifu Han; Ying Cao; Di Fan; Hong Li; Huixian Mo; Yi Feng; Lei Liu; Zheng Wang; Yanling Yue; Sujuan Cui; She Chen; Jijie Chai; Ligeng Ma
Journal:  PLoS Genet       Date:  2012-04-19       Impact factor: 5.917

10.  Interaction of Polycomb-group proteins controlling flowering in Arabidopsis.

Authors:  Yindee Chanvivattana; Anthony Bishopp; Daniel Schubert; Christine Stock; Yong-Hwan Moon; Z Renee Sung; Justin Goodrich
Journal:  Development       Date:  2004-09-29       Impact factor: 6.868

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  9 in total

Review 1.  DNA-sequence-specific erasers of epigenetic memory.

Authors:  Iva Mozgova; Claudia Köhler
Journal:  Nat Genet       Date:  2016-05-27       Impact factor: 38.330

2.  The Chromatin Remodelers PKL and PIE1 Act in an Epigenetic Pathway That Determines H3K27me3 Homeostasis in Arabidopsis.

Authors:  Benjamin Carter; Brett Bishop; Kwok Ki Ho; Ru Huang; Wei Jia; Heng Zhang; Pete E Pascuzzi; Roger B Deal; Joe Ogas
Journal:  Plant Cell       Date:  2018-05-25       Impact factor: 11.277

3.  Large-scale heterochromatin remodeling linked to overreplication-associated DNA damage.

Authors:  Wei Feng; Christopher J Hale; Ryan S Over; Shawn J Cokus; Steven E Jacobsen; Scott D Michaels
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

Review 4.  Perspectives for epigenetic editing in crops.

Authors:  S Selma; D Orzáez
Journal:  Transgenic Res       Date:  2021-04-23       Impact factor: 2.788

5.  The Interplay of Chromatin Landscape and DNA-Binding Context Suggests Distinct Modes of EIN3 Regulation in Arabidopsis thaliana.

Authors:  Elena V Zemlyanskaya; Victor G Levitsky; Dmitry Y Oshchepkov; Ivo Grosse; Victoria V Mironova
Journal:  Front Plant Sci       Date:  2017-01-09       Impact factor: 5.753

6.  Robustness of Transposable Element Regulation but No Genomic Shock Observed in Interspecific Arabidopsis Hybrids.

Authors:  Ulrike Göbel; Agustin L Arce; Fei He; Alain Rico; Gregor Schmitz; Juliette de Meaux
Journal:  Genome Biol Evol       Date:  2018-06-01       Impact factor: 3.416

Review 7.  Methanol in Plant Life.

Authors:  Yuri L Dorokhov; Ekaterina V Sheshukova; Tatiana V Komarova
Journal:  Front Plant Sci       Date:  2018-11-09       Impact factor: 5.753

8.  Profiling of H3K4me3 and H3K27me3 and Their Roles in Gene Subfunctionalization in Allotetraploid Cotton.

Authors:  Aicen Zhang; Yangyang Wei; Yining Shi; Xiaojuan Deng; Jingjing Gao; Yilong Feng; Dongyang Zheng; Xuejiao Cheng; Zhaoguo Li; Tao Wang; Kunbo Wang; Fang Liu; Renhai Peng; Wenli Zhang
Journal:  Front Plant Sci       Date:  2021-12-15       Impact factor: 5.753

Review 9.  The Dynamism of Transposon Methylation for Plant Development and Stress Adaptation.

Authors:  Muthusamy Ramakrishnan; Lakkakula Satish; Ruslan Kalendar; Mathiyazhagan Narayanan; Sabariswaran Kandasamy; Anket Sharma; Abolghassem Emamverdian; Qiang Wei; Mingbing Zhou
Journal:  Int J Mol Sci       Date:  2021-10-21       Impact factor: 5.923

  9 in total

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