Literature DB >> 22911561

A (13)C double-filtered NOESY with strongly reduced artefacts and improved sensitivity.

R H Folmer1, C W Hilbers, R N Konings, K Hallenga.   

Abstract

A (1)H NOESY experiment with two (13)C half-filters is described which has, compared to previously reported versions, an enhanced overall sensitivity and strongly reduced intramolecular cross peaks in any part of the spectrum edited for intermolecular NOEs. By adding a shaped (13)C pulse to the half-filter which selectively inverts the aromatic resonances, the filter can be tuned separately and simultaneously for the aliphatic and aromatic regions. Contrary to recently proposed schemes, no magnetization is destroyed, so that full sensitivity is retained for symmetric systems such as homodimers. Furthermore, by replacing the rectangular 180° (13)C pulses by high-power hyperbolic secant pulses for inversion of the complete (13)C spectral range, offset effects (which are another source of signal loss and artefacts) are eliminated. The spectra edited for intermolecular NOEs clearly demonstrate that residual artefacts are considerably smaller than in the original version of the experiment.

Entities:  

Year:  1995        PMID: 22911561     DOI: 10.1007/BF00182287

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

Review 1.  Heteronuclear filters in two-dimensional [1H,1H]-NMR spectroscopy: combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions.

Authors:  G Otting; K Wüthrich
Journal:  Q Rev Biophys       Date:  1990-02       Impact factor: 5.318

2.  A constant-time (13)C- (1)H HSQC with uniform excitation over the complete (13)C chemical shift range.

Authors:  K Hallenga; G M Lippens
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

3.  The NMR structure of cyclosporin A bound to cyclophilin in aqueous solution.

Authors:  C Weber; G Wider; B von Freyberg; R Traber; W Braun; H Widmer; K Wüthrich
Journal:  Biochemistry       Date:  1991-07-02       Impact factor: 3.162

4.  Solution structure of the tetrameric minimum transforming domain of p53.

Authors:  W Lee; T S Harvey; Y Yin; P Yau; D Litchfield; C H Arrowsmith
Journal:  Nat Struct Biol       Date:  1994-12

5.  Nuclear magnetic resonance spectroscopy of a DNA complex with the uniformly 13C-labeled Antennapedia homeodomain and structure determination of the DNA-bound homeodomain.

Authors:  Y Q Qian; G Otting; M Billeter; M Müller; W Gehring; K Wüthrich
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

6.  The solution structure of the Tyr41-->His mutant of the single-stranded DNA binding protein encoded by gene V of the filamentous bacteriophage M13.

Authors:  P J Folkers; M Nilges; R H Folmer; R N Konings; C W Hilbers
Journal:  J Mol Biol       Date:  1994-02-11       Impact factor: 5.469

7.  The solution structures of the trp repressor-operator DNA complex.

Authors:  H Zhang; D Zhao; M Revington; W Lee; X Jia; C Arrowsmith; O Jardetzky
Journal:  J Mol Biol       Date:  1994-05-13       Impact factor: 5.469

8.  Secondary structure of the single-stranded DNA binding protein encoded by filamentous phage Pf3 as determined by NMR.

Authors:  R H Folmer; P J Folkers; A Kaan; A J Jonker; J M Aelen; R N Konings; C W Hilbers
Journal:  Eur J Biochem       Date:  1994-09-01

9.  Observation of inter-subunit nuclear Overhauser effects in a dimeric protein. Application to the Arc repressor.

Authors:  M J Burgering; R Boelens; M Caffrey; J N Breg; R Kaptein
Journal:  FEBS Lett       Date:  1993-09-06       Impact factor: 4.124

10.  A pulsed field gradient isotope-filtered 3D 13C HMQC-NOESY experiment for extracting intermolecular NOE contacts in molecular complexes.

Authors:  W Lee; M J Revington; C Arrowsmith; L E Kay
Journal:  FEBS Lett       Date:  1994-08-15       Impact factor: 4.124

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  11 in total

1.  An improved double-tuned and isotope-filtered pulse scheme based on a pulsed field gradient and a wide-band inversion shaped pulse.

Authors:  K Ogura; H Terasawa; F Inagaki
Journal:  J Biomol NMR       Date:  1996-12       Impact factor: 2.835

Review 2.  Fuzzy complexes of myelin basic protein: NMR spectroscopic investigations of a polymorphic organizational linker of the central nervous system.

Authors:  David S Libich; Mumdooh A M Ahmed; Ligang Zhong; Vladimir V Bamm; Vladimir Ladizhansky; George Harauz
Journal:  Biochem Cell Biol       Date:  2010-04       Impact factor: 3.626

3.  Applications of NMR-based PRE and EPR-based DEER spectroscopy to homodimer chain exchange characterization and structure determination.

Authors:  Yunhuang Yang; Theresa A Ramelot; Shuisong Ni; Robert M McCarrick; Michael A Kennedy
Journal:  Methods Mol Biol       Date:  2014

4.  The NMR solution structure and characterization of pH dependent chemical shifts of the beta-elicitin, cryptogein.

Authors:  P R Gooley; M A Keniry; R A Dimitrov; D E Marsh; D W Keizer; K R Gayler; B R Grant
Journal:  J Biomol NMR       Date:  1998-11       Impact factor: 2.835

5.  Floating stereospecific assignment revisited: application to an 18 kDa protein and comparison with J-coupling data.

Authors:  R H Folmer; C W Hilbers; R N Konings; M Nilges
Journal:  J Biomol NMR       Date:  1997-04       Impact factor: 2.835

6.  The structure of mouse HP1 suggests a unique mode of single peptide recognition by the shadow chromo domain dimer.

Authors:  S V Brasher; B O Smith; R H Fogh; D Nietlispach; A Thiru; P R Nielsen; R W Broadhurst; L J Ball; N V Murzina; E D Laue
Journal:  EMBO J       Date:  2000-04-03       Impact factor: 11.598

7.  Refined solution structure of the dimeric N-terminal HHCC domain of HIV-2 integrase.

Authors:  A P Eijkelenboom; F M van den Ent; R Wechselberger; R H Plasterk; R Kaptein; R Boelens
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

8.  Half-filter experiments for assignment, structure determination and hydration analysis of unlabelled ligands bound to 13C/15N labelled proteins.

Authors:  C Dalvit; S Cottens; P Ramage; U Hommel
Journal:  J Biomol NMR       Date:  1999-01       Impact factor: 2.835

9.  Improved NMR spectra of a protein-DNA complex through rational mutagenesis and the application of a sensitivity optimized isotope-filtered NOESY experiment.

Authors:  J Iwahara; J M Wojciak; R T Clubb
Journal:  J Biomol NMR       Date:  2001-03       Impact factor: 2.835

10.  Calculation of symmetric multimer structures from NMR data using a priori knowledge of the monomer structure, co-monomer restraints, and interface mapping: The case of leucine zippers.

Authors:  S I O'Donoghue; G F King; M Nilges
Journal:  J Biomol NMR       Date:  1996-09       Impact factor: 2.835

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