Literature DB >> 20859780

An improved double-tuned and isotope-filtered pulse scheme based on a pulsed field gradient and a wide-band inversion shaped pulse.

K Ogura1, H Terasawa, F Inagaki.   

Abstract

We have developed an improved isotope-filtered pulse scheme in combination with a double-tuned filter, a hyperbolic secant inversion pulse, and a z-filter with a pulsed field gradient. These filtering pulse schemes have been incorporated into several one-, two-, and three-dimensional experiments, which were applied to the (13)C/(15)N uniformly labeled N-terminal SH3 domain of Grb2 complexed with the unlabeled Sos-derived peptide. The proton resonances of the Sos-derived peptide were unambiguously assigned using isotope-filtered DQF-COSY, TOCSY and NOESY spectra. Furthermore, in the isotope-filtered, isotope-edited 3D NOESY spectrum, intermolecular NOEs between the labeled protein and the unlabeled peptide could be identified. Through these applications, we demonstrate the high filtering efficiency of the presented pulse scheme.

Entities:  

Year:  1996        PMID: 20859780     DOI: 10.1007/BF00228150

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  14 in total

1.  Fully 13C-Refocused Multidimensional 13C-Edited Pulse Schemes Using Broadband Shaped Inversion and Refocusing Pulses

Authors: 
Journal:  J Magn Reson B       Date:  1996-07

2.  A constant-time (13)C- (1)H HSQC with uniform excitation over the complete (13)C chemical shift range.

Authors:  K Hallenga; G M Lippens
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

3.  A (13)C double-filtered NOESY with strongly reduced artefacts and improved sensitivity.

Authors:  R H Folmer; C W Hilbers; R N Konings; K Hallenga
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

4.  Solution structure of a calmodulin-target peptide complex by multidimensional NMR.

Authors:  M Ikura; G M Clore; A M Gronenborn; G Zhu; C B Klee; A Bax
Journal:  Science       Date:  1992-05-01       Impact factor: 47.728

5.  Solution structure of the tetrameric minimum transforming domain of p53.

Authors:  W Lee; T S Harvey; Y Yin; P Yau; D Litchfield; C H Arrowsmith
Journal:  Nat Struct Biol       Date:  1994-12

6.  Structure of the N-terminal SH3 domain of GRB2 complexed with a peptide from the guanine nucleotide releasing factor Sos.

Authors:  H Terasawa; D Kohda; H Hatanaka; S Tsuchiya; K Ogura; K Nagata; S Ishii; V Mandiyan; A Ullrich; J Schlessinger
Journal:  Nat Struct Biol       Date:  1994-12

7.  The solution structures of the trp repressor-operator DNA complex.

Authors:  H Zhang; D Zhao; M Revington; W Lee; X Jia; C Arrowsmith; O Jardetzky
Journal:  J Mol Biol       Date:  1994-05-13       Impact factor: 5.469

8.  Conformation of two non-immunosuppressive FK506 analogs when bound to FKBP by isotope-filtered NMR.

Authors:  A M Petros; M Kawai; J R Luly; S W Fesik
Journal:  FEBS Lett       Date:  1992-08-24       Impact factor: 4.124

9.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

10.  A pulsed field gradient isotope-filtered 3D 13C HMQC-NOESY experiment for extracting intermolecular NOE contacts in molecular complexes.

Authors:  W Lee; M J Revington; C Arrowsmith; L E Kay
Journal:  FEBS Lett       Date:  1994-08-15       Impact factor: 4.124

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  38 in total

1.  Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2.

Authors:  Seizo Koshiba; Hua Li; Yoko Motoda; Tadashi Tomizawa; Takuma Kasai; Naoya Tochio; Takashi Yabuki; Takushi Harada; Satoru Watanabe; Akiko Tanaka; Mikako Shirouzu; Takanori Kigawa; Tadashi Yamamoto; Shigeyuki Yokoyama
Journal:  J Struct Funct Genomics       Date:  2010-05-08

2.  New applications of 2D filtered/edited NOESY for assignment and structure elucidation of RNA and RNA-protein complexes.

Authors:  Robert D Peterson; Carla A Theimer; Haihong Wu; Juli Feigon
Journal:  J Biomol NMR       Date:  2004-01       Impact factor: 2.835

3.  Conformation of an Shc-derived phosphotyrosine-containing peptide complexed with the Grb2 SH2 domain.

Authors:  K Ogura; S Tsuchiya; H Terasawa; S Yuzawa; H Hatanaka; V Mandiyan; J Schlessinger; F Inagaki
Journal:  J Biomol NMR       Date:  1997-10       Impact factor: 2.835

4.  Structure of bacterial transcription factor SpoIIID and evidence for a novel mode of DNA binding.

Authors:  Bin Chen; Paul Himes; Yu Liu; Yang Zhang; Zhenwei Lu; Aizhuo Liu; Honggao Yan; Lee Kroos
Journal:  J Bacteriol       Date:  2014-02-28       Impact factor: 3.490

5.  Ubiquitin C-Terminal Hydrolase L1: Biochemical and Cellular Characterization of a Covalent Cyanopyrrolidine-Based Inhibitor.

Authors:  Aaron D Krabill; Hao Chen; Sajjad Hussain; Chao Feng; Ammara Abdullah; Chittaranjan Das; Uma K Aryal; Carol Beth Post; Michael K Wendt; Paul J Galardy; Daniel P Flaherty
Journal:  Chembiochem       Date:  2019-11-07       Impact factor: 3.164

6.  Characterization of the p300 Taz2-p53 TAD2 complex and comparison with the p300 Taz2-p53 TAD1 complex.

Authors:  Lisa M Miller Jenkins; Hanqiao Feng; Stewart R Durell; Harichandra D Tagad; Sharlyn J Mazur; Joseph E Tropea; Yawen Bai; Ettore Appella
Journal:  Biochemistry       Date:  2015-03-16       Impact factor: 3.162

7.  Characterization of molecular interactions between ACP and halogenase domains in the Curacin A polyketide synthase.

Authors:  Alena Busche; Daniel Gottstein; Christopher Hein; Nina Ripin; Irina Pader; Peter Tufar; Eli B Eisman; Liangcai Gu; Christopher T Walsh; David H Sherman; Frank Löhr; Peter Güntert; Volker Dötsch
Journal:  ACS Chem Biol       Date:  2011-12-15       Impact factor: 5.100

8.  Two closely spaced tyrosines regulate NFAT signaling in B cells via Syk association with Vav.

Authors:  Chih-Hong Chen; Victoria A Martin; Nina M Gorenstein; Robert L Geahlen; Carol Beth Post
Journal:  Mol Cell Biol       Date:  2011-05-23       Impact factor: 4.272

9.  Solution structure of the regulatory domain of human cardiac troponin C in complex with the switch region of cardiac troponin I and W7: the basis of W7 as an inhibitor of cardiac muscle contraction.

Authors:  Marta Oleszczuk; Ian M Robertson; Monica X Li; Brian D Sykes
Journal:  J Mol Cell Cardiol       Date:  2010-01-29       Impact factor: 5.000

10.  Diverse recognition of non-PxxP peptide ligands by the SH3 domains from p67(phox), Grb2 and Pex13p.

Authors:  Keiichiro Kami; Ryu Takeya; Hideki Sumimoto; Daisuke Kohda
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

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