Literature DB >> 22911143

Improved HSQC experiments for the observation of exchange broadened signals.

F A Mulder1, C A Spronk, M Slijper, R Kaptein, R Boelens.   

Abstract

We present here HSQC experiments with improved sensitivity for signals in the presence of exchange broadening. During periods of coherence transfer through scalar coupling the experiments employ CPMG-derived pulse trains to reduce loss of dephasing of spin coherence due to chemical exchange. (15)N-(1)H gradient CPMG-HSQC and SE-CPMG-HSQC experiments have been developed and applied to complexes of lac repressor headpiece with operator DNA. Improved sensitivity is demonstrated for many protein backbone and side-chain resonances in the complex, markedly for signals of protons located at the protein-DNA interface. In addition, a significant increase in intensity is observed for arginine guanidino groups undergoing conformational exchange.

Entities:  

Year:  1996        PMID: 22911143     DOI: 10.1007/BF00211169

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  6 in total

1.  lac Repressor headpiece binds specifically to half of the lac operator: a proton nuclear magnetic resonance study.

Authors:  R M Scheek; E R Zuiderweg; K J Klappe; J H van Boom; R Kaptein; H Rüterjans; K Beyreuther
Journal:  Biochemistry       Date:  1983-01-04       Impact factor: 3.162

2.  Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.

Authors:  V P Chuprina; J A Rullmann; R M Lamerichs; J H van Boom; R Boelens; R Kaptein
Journal:  J Mol Biol       Date:  1993-11-20       Impact factor: 5.469

3.  Determination of the rotational dynamics and pH dependence of the hydrogen exchange rates of the arginine guanidino group using NMR spectroscopy.

Authors:  G D Henry; B D Sykes
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

4.  Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data: change of tertiary structure upon binding to the lac operator.

Authors:  M Slijper; A M Bonvin; R Boelens; R Kaptein
Journal:  J Mol Biol       Date:  1996-06-21       Impact factor: 5.469

5.  A general enhancement scheme in heteronuclear multidimensional NMR employing pulsed field gradients.

Authors:  J Schleucher; M Schwendinger; M Sattler; P Schmidt; O Schedletzky; S J Glaser; O W Sørensen; C Griesinger
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

6.  Triple resonance HNCCCH experiments for correlating exchangeable and nonexchangeable cytidine and uridine base protons in RNA.

Authors:  J P Simorre; G R Zimmermann; A Pardi; B T Farmer; L Mueller
Journal:  J Biomol NMR       Date:  1995-12       Impact factor: 2.835

  6 in total
  24 in total

1.  Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements.

Authors:  F A Mulder; P J van Tilborg; R Kaptein; R Boelens
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

2.  The amino-terminal helix modulates light-activated conformational changes in AsLOV2.

Authors:  Josiah P Zayner; Chloe Antoniou; Tobin R Sosnick
Journal:  J Mol Biol       Date:  2012-03-07       Impact factor: 5.469

3.  Complete determination of the Pin1 catalytic domain thermodynamic cycle by NMR lineshape analysis.

Authors:  Alexander I Greenwood; Monique J Rogals; Soumya De; Kun Ping Lu; Evgenii L Kovrigin; Linda K Nicholson
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

4.  Effect of hsp70 chaperone on the folding and misfolding of polypeptides modeling an elongating protein chain.

Authors:  Neşe Kurt; Senapathy Rajagopalan; Silvia Cavagnero
Journal:  J Mol Biol       Date:  2005-11-08       Impact factor: 5.469

5.  Folding kinetics and thermodynamics of Pseudomonas syringae effector protein AvrPto provide insight into translocation via the type III secretion system.

Authors:  Jennifer E Dawson; Linda K Nicholson
Journal:  Protein Sci       Date:  2008-07       Impact factor: 6.725

6.  High-resolution conformation and backbone dynamics of a soluble aggregate of apomyoglobin119.

Authors:  Senapathy Rajagopalan; Neşe Kurt; Silvia Cavagnero
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

7.  Quantification of reaction cycle parameters for an essential molecular switch in an auxin-responsive transcription circuit in rice.

Authors:  Lucila Andrea Acevedo; Jeahoo Kwon; Linda K Nicholson
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-29       Impact factor: 11.205

8.  Origin and removal of mixed-phase artifacts in gradient sensitivity enhanced heteronuclear single quantum correlation spectra.

Authors:  Frans A A Mulder; Renee Otten; Ruud M Scheek
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

9.  1H and 15N resonance assignment, secondary structure and dynamic behaviour of the C-terminal domain of human papillomavirus oncoprotein E6.

Authors:  Yves Nominé; Sebastian Charbonnier; Laurent Miguet; Noelle Potier; Alain Van Dorsselaer; R Andrew Atkinson; Gilles Travé; Bruno Kieffer
Journal:  J Biomol NMR       Date:  2005-02       Impact factor: 2.835

10.  Measurement of carbonyl chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy: comparison between uniformly and selectively (13)C labeled samples.

Authors:  Patrik Lundström; D Flemming Hansen; Lewis E Kay
Journal:  J Biomol NMR       Date:  2008-09-02       Impact factor: 2.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.