Literature DB >> 22904992

(Z)-3-Benzyl-2-[(2-phenyl-cyclo-hex-2-en-yl)imino]-1,3-thia-zolidin-4-one.

Chin Wei Ooi, Hoong-Kun Fun, Ching Kheng Quah, Murugan Sathishkumar, Alagusundaram Ponnuswamy.   

Abstract

The title compound, C(22)H(22)N(2)OS, exists in a Z configuration with respect to the N=C bond. The cyclo-hexene ring adopts a distorted sofa conformation. The thia-zolidine ring is essentially planar, with a maximum deviation of 0.030 (2) Å, and forms dihedral angles of 76.66 (6) and 74.55 (6)° with the terminal phenyl rings. The dihedral angle between the phenyl rings is 71.55 (7)°. In the crystal, a C-H⋯π inter-action is observed.

Entities:  

Year:  2012        PMID: 22904992      PMCID: PMC3415005          DOI: 10.1107/S1600536812033211

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of thia­zolidin-4-one derivatives, see: Previtera et al. (1994 ▶); Sharma et al. (2000 ▶); Kato, Ozaki & Tamura (1999 ▶); Kato, Ozaki & Ohi (1999 ▶); Tanabe et al. (1991 ▶); Rawal et al. (2005 ▶); Voss et al. (2003 ▶). For related structures, see: Fun et al. (2011 ▶); Ooi et al. (2012a ▶,b ▶,c ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C22H22N2OS M = 362.48 Monoclinic, a = 12.8400 (2) Å b = 8.9261 (1) Å c = 17.9634 (3) Å β = 118.476 (1)° V = 1809.72 (5) Å3 Z = 4 Mo Kα radiation μ = 0.19 mm−1 T = 100 K 0.39 × 0.32 × 0.21 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.929, T max = 0.960 22263 measured reflections 6670 independent reflections 4979 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.115 S = 1.03 6670 reflections 235 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL ; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812033211/is5168sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033211/is5168Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812033211/is5168Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H22N2OSF(000) = 768
Mr = 362.48Dx = 1.330 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6720 reflections
a = 12.8400 (2) Åθ = 2.6–32.7°
b = 8.9261 (1) ŵ = 0.19 mm1
c = 17.9634 (3) ÅT = 100 K
β = 118.476 (1)°Block, colourless
V = 1809.72 (5) Å30.39 × 0.32 × 0.21 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer6670 independent reflections
Radiation source: fine-focus sealed tube4979 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
φ and ω scansθmax = 32.8°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −19→19
Tmin = 0.929, Tmax = 0.960k = −11→13
22263 measured reflectionsl = −25→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0474P)2 + 0.6514P] where P = (Fo2 + 2Fc2)/3
6670 reflections(Δ/σ)max < 0.001
235 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.36793 (3)0.30018 (4)0.40002 (2)0.02412 (8)
O10.40661 (8)0.70672 (11)0.34194 (6)0.0271 (2)
N10.16966 (8)0.40320 (11)0.40509 (6)0.01676 (19)
N20.28594 (8)0.57353 (12)0.37911 (6)0.01740 (19)
C10.27121 (10)0.31490 (14)0.59927 (8)0.0202 (2)
H1A0.31360.26570.57670.024*
C20.33166 (11)0.38392 (16)0.67770 (8)0.0246 (3)
H2A0.41390.37810.70780.030*
C30.27033 (12)0.46163 (16)0.71150 (8)0.0260 (3)
H3A0.31100.50910.76370.031*
C40.14737 (12)0.46752 (16)0.66629 (8)0.0251 (3)
H4A0.10560.52010.68830.030*
C50.08622 (11)0.39566 (15)0.58865 (8)0.0210 (2)
H5A0.00390.39910.55970.025*
C60.14702 (10)0.31810 (13)0.55349 (7)0.0171 (2)
C70.08369 (9)0.24054 (14)0.47038 (7)0.0168 (2)
C8−0.01735 (10)0.16544 (14)0.44784 (8)0.0204 (2)
H8A−0.04940.16780.48460.025*
C9−0.08255 (10)0.07754 (15)0.36700 (8)0.0238 (3)
H9A−0.15000.13510.32660.029*
H9B−0.1121−0.01490.37840.029*
C10−0.00165 (11)0.04137 (15)0.32905 (8)0.0238 (3)
H10A0.0564−0.03300.36360.029*
H10B−0.04790.00070.27250.029*
C110.06081 (11)0.18384 (15)0.32531 (8)0.0215 (2)
H11A0.00210.25860.29220.026*
H11B0.10760.16270.29720.026*
C120.14166 (10)0.24639 (14)0.41394 (7)0.0170 (2)
H12A0.21520.18820.44020.020*
C130.25958 (9)0.42884 (13)0.39558 (7)0.0165 (2)
C140.43819 (12)0.44070 (16)0.36673 (10)0.0288 (3)
H14A0.52170.44770.40740.035*
H14B0.43090.41420.31210.035*
C150.37776 (10)0.58888 (15)0.36075 (8)0.0212 (2)
C160.21796 (10)0.70455 (14)0.38096 (7)0.0183 (2)
H16A0.13990.67260.37050.022*
H16B0.20790.77340.33620.022*
C170.27962 (9)0.78435 (13)0.46541 (7)0.0172 (2)
C180.34360 (10)0.91455 (14)0.47333 (8)0.0197 (2)
H18A0.34750.95240.42650.024*
C190.40185 (10)0.98879 (15)0.55063 (8)0.0226 (2)
H19A0.44471.07560.55550.027*
C200.39554 (11)0.93244 (16)0.62022 (8)0.0248 (3)
H20A0.43320.98270.67170.030*
C210.33340 (11)0.80141 (16)0.61358 (8)0.0249 (3)
H21A0.33070.76320.66080.030*
C220.27519 (10)0.72727 (15)0.53625 (8)0.0208 (2)
H22A0.23330.63970.53170.025*
U11U22U33U12U13U23
S10.02555 (14)0.01899 (15)0.03463 (18)0.00580 (11)0.01988 (13)0.00295 (13)
O10.0295 (4)0.0247 (5)0.0331 (5)−0.0013 (4)0.0198 (4)0.0046 (4)
N10.0181 (4)0.0166 (5)0.0159 (4)0.0006 (3)0.0083 (3)−0.0002 (4)
N20.0179 (4)0.0166 (5)0.0192 (5)0.0021 (3)0.0101 (3)0.0010 (4)
C10.0202 (5)0.0209 (6)0.0193 (5)0.0006 (4)0.0093 (4)−0.0007 (5)
C20.0244 (5)0.0275 (7)0.0197 (6)−0.0027 (5)0.0086 (4)−0.0002 (5)
C30.0366 (7)0.0245 (7)0.0168 (6)−0.0034 (5)0.0127 (5)−0.0021 (5)
C40.0372 (7)0.0233 (6)0.0209 (6)0.0042 (5)0.0188 (5)0.0016 (5)
C50.0232 (5)0.0214 (6)0.0209 (6)0.0035 (4)0.0126 (4)0.0038 (5)
C60.0191 (5)0.0165 (5)0.0166 (5)0.0010 (4)0.0093 (4)0.0022 (4)
C70.0173 (4)0.0163 (5)0.0166 (5)0.0020 (4)0.0079 (4)0.0014 (4)
C80.0196 (5)0.0208 (6)0.0205 (6)0.0004 (4)0.0091 (4)0.0020 (5)
C90.0208 (5)0.0223 (6)0.0243 (6)−0.0032 (4)0.0075 (4)0.0001 (5)
C100.0241 (5)0.0188 (6)0.0233 (6)−0.0003 (4)0.0070 (4)−0.0040 (5)
C110.0241 (5)0.0217 (6)0.0191 (6)−0.0011 (4)0.0105 (4)−0.0033 (5)
C120.0178 (4)0.0157 (5)0.0181 (5)0.0009 (4)0.0090 (4)−0.0004 (4)
C130.0184 (4)0.0161 (5)0.0149 (5)0.0025 (4)0.0078 (4)0.0001 (4)
C140.0308 (6)0.0245 (7)0.0426 (8)0.0042 (5)0.0269 (6)0.0031 (6)
C150.0208 (5)0.0246 (6)0.0207 (6)0.0012 (4)0.0118 (4)0.0007 (5)
C160.0168 (4)0.0169 (5)0.0190 (5)0.0029 (4)0.0069 (4)0.0012 (4)
C170.0146 (4)0.0164 (5)0.0197 (5)0.0034 (4)0.0076 (4)0.0007 (4)
C180.0198 (5)0.0166 (6)0.0226 (6)0.0021 (4)0.0101 (4)0.0017 (4)
C190.0186 (5)0.0181 (6)0.0279 (6)0.0007 (4)0.0084 (4)−0.0023 (5)
C200.0231 (5)0.0249 (7)0.0204 (6)0.0067 (5)0.0055 (4)−0.0032 (5)
C210.0279 (6)0.0257 (7)0.0215 (6)0.0073 (5)0.0122 (5)0.0034 (5)
C220.0208 (5)0.0197 (6)0.0234 (6)0.0023 (4)0.0118 (4)0.0014 (5)
S1—C131.7762 (12)C9—H9B0.9700
S1—C141.8054 (14)C10—C111.5220 (18)
O1—C151.2153 (16)C10—H10A0.9700
N1—C131.2660 (15)C10—H10B0.9700
N1—C121.4724 (16)C11—C121.5323 (16)
N2—C151.3742 (15)C11—H11A0.9700
N2—C131.4020 (16)C11—H11B0.9700
N2—C161.4691 (15)C12—H12A0.9800
C1—C21.3872 (17)C14—C151.5112 (18)
C1—C61.4033 (16)C14—H14A0.9700
C1—H1A0.9300C14—H14B0.9700
C2—C31.388 (2)C16—C171.5133 (17)
C2—H2A0.9300C16—H16A0.9700
C3—C41.3900 (19)C16—H16B0.9700
C3—H3A0.9300C17—C181.3909 (17)
C4—C51.3888 (18)C17—C221.3968 (18)
C4—H4A0.9300C18—C191.3915 (18)
C5—C61.3992 (17)C18—H18A0.9300
C5—H5A0.9300C19—C201.385 (2)
C6—C71.4873 (16)C19—H19A0.9300
C7—C81.3401 (16)C20—C211.389 (2)
C7—C121.5178 (17)C20—H20A0.9300
C8—C91.5053 (18)C21—C221.3915 (18)
C8—H8A0.9300C21—H21A0.9300
C9—C101.5241 (19)C22—H22A0.9300
C9—H9A0.9700
C13—S1—C1492.31 (6)C12—C11—H11B109.3
C13—N1—C12118.15 (10)H11A—C11—H11B108.0
C15—N2—C13117.62 (10)N1—C12—C7109.12 (10)
C15—N2—C16120.86 (10)N1—C12—C11108.27 (10)
C13—N2—C16121.51 (9)C7—C12—C11112.11 (9)
C2—C1—C6121.02 (12)N1—C12—H12A109.1
C2—C1—H1A119.5C7—C12—H12A109.1
C6—C1—H1A119.5C11—C12—H12A109.1
C1—C2—C3120.45 (12)N1—C13—N2121.50 (10)
C1—C2—H2A119.8N1—C13—S1128.48 (10)
C3—C2—H2A119.8N2—C13—S1110.02 (8)
C2—C3—C4119.12 (12)C15—C14—S1108.11 (9)
C2—C3—H3A120.4C15—C14—H14A110.1
C4—C3—H3A120.4S1—C14—H14A110.1
C5—C4—C3120.67 (12)C15—C14—H14B110.1
C5—C4—H4A119.7S1—C14—H14B110.1
C3—C4—H4A119.7H14A—C14—H14B108.4
C4—C5—C6120.79 (11)O1—C15—N2124.27 (12)
C4—C5—H5A119.6O1—C15—C14124.27 (11)
C6—C5—H5A119.6N2—C15—C14111.46 (11)
C5—C6—C1117.92 (11)N2—C16—C17111.40 (9)
C5—C6—C7121.86 (10)N2—C16—H16A109.3
C1—C6—C7120.22 (11)C17—C16—H16A109.3
C8—C7—C6121.55 (11)N2—C16—H16B109.3
C8—C7—C12121.86 (11)C17—C16—H16B109.3
C6—C7—C12116.55 (10)H16A—C16—H16B108.0
C7—C8—C9124.42 (12)C18—C17—C22119.36 (11)
C7—C8—H8A117.8C18—C17—C16119.80 (11)
C9—C8—H8A117.8C22—C17—C16120.83 (11)
C8—C9—C10110.96 (10)C17—C18—C19120.68 (12)
C8—C9—H9A109.4C17—C18—H18A119.7
C10—C9—H9A109.4C19—C18—H18A119.7
C8—C9—H9B109.4C20—C19—C18119.52 (12)
C10—C9—H9B109.4C20—C19—H19A120.2
H9A—C9—H9B108.0C18—C19—H19A120.2
C11—C10—C9109.18 (11)C19—C20—C21120.45 (12)
C11—C10—H10A109.8C19—C20—H20A119.8
C9—C10—H10A109.8C21—C20—H20A119.8
C11—C10—H10B109.8C20—C21—C22119.96 (13)
C9—C10—H10B109.8C20—C21—H21A120.0
H10A—C10—H10B108.3C22—C21—H21A120.0
C10—C11—C12111.64 (10)C21—C22—C17120.02 (12)
C10—C11—H11A109.3C21—C22—H22A120.0
C12—C11—H11A109.3C17—C22—H22A120.0
C10—C11—H11B109.3
C6—C1—C2—C3−1.9 (2)C12—N1—C13—S1−5.83 (16)
C1—C2—C3—C41.0 (2)C15—N2—C13—N1−173.23 (11)
C2—C3—C4—C50.6 (2)C16—N2—C13—N16.54 (17)
C3—C4—C5—C6−1.2 (2)C15—N2—C13—S16.76 (13)
C4—C5—C6—C10.25 (19)C16—N2—C13—S1−173.47 (8)
C4—C5—C6—C7−179.85 (12)C14—S1—C13—N1173.49 (12)
C2—C1—C6—C51.27 (19)C14—S1—C13—N2−6.49 (9)
C2—C1—C6—C7−178.63 (12)C13—S1—C14—C154.84 (10)
C5—C6—C7—C8−39.26 (18)C13—N2—C15—O1176.88 (12)
C1—C6—C7—C8140.65 (13)C16—N2—C15—O1−2.89 (18)
C5—C6—C7—C12142.81 (12)C13—N2—C15—C14−3.02 (15)
C1—C6—C7—C12−37.29 (16)C16—N2—C15—C14177.21 (11)
C6—C7—C8—C9−176.52 (11)S1—C14—C15—O1178.04 (11)
C12—C7—C8—C91.30 (19)S1—C14—C15—N2−2.07 (14)
C7—C8—C9—C1018.81 (18)C15—N2—C16—C17−83.38 (13)
C8—C9—C10—C11−49.49 (14)C13—N2—C16—C1796.86 (12)
C9—C10—C11—C1263.30 (13)N2—C16—C17—C18101.26 (12)
C13—N1—C12—C7148.59 (10)N2—C16—C17—C22−77.43 (13)
C13—N1—C12—C11−89.14 (12)C22—C17—C18—C19−0.68 (17)
C8—C7—C12—N1130.49 (12)C16—C17—C18—C19−179.39 (10)
C6—C7—C12—N1−51.58 (13)C17—C18—C19—C20−0.22 (18)
C8—C7—C12—C1110.56 (16)C18—C19—C20—C211.14 (18)
C6—C7—C12—C11−171.51 (10)C19—C20—C21—C22−1.14 (18)
C10—C11—C12—N1−163.06 (10)C20—C21—C22—C170.22 (18)
C10—C11—C12—C7−42.63 (14)C18—C17—C22—C210.68 (17)
C12—N1—C13—N2174.16 (10)C16—C17—C22—C21179.37 (10)
D—H···AD—HH···AD···AD—H···A
C22—H22A···Cg10.932.973.7662 (15)143
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 phenyl ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C22—H22ACg10.932.973.7662 (15)143
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8.  (Z)-3-(4-Bromo-phen-yl)-2-[(2-phenyl-cyclo-hex-2-en-1-yl)imino]-1,3-thia-zol-idin-4-one.

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