Literature DB >> 22807829

(Z)-3-(4-Chloro-phen-yl)-2-(2-phenyl-cyclo-hex-2-en-1-yl-imino)-thia-zolidin-4-one.

Chin Wei Ooi, Hoong-Kun Fun, Ching Kheng Quah, Murugan Sathishkumar, Alagusundaram Ponnuswamy.   

Abstract

The title compound, C(21)H(19)ClN(2)OS, exists in a cis conformation with respect to the N=C bond [1.2608 (13) Å]. The cyclo-hexene ring adopts a distorted half-chair conformation. The thia-zolidine ring is close to being planar (r.m.s. deviation = 0.057 Å) and makes dihedral angles of 62.92 (6) and 56.32 (6)°, respectively, with the benzene ring and the chloro-substituted benzene ring. The dihedral angle between the benzene ring and the chloro-substituted benzene ring is 72.91 (6)°. In the crystal, mol-ecules are linked by C-H⋯O and C-H⋯N hydrogen bonds into undulating sheets lying parallel to the bc plane. The crystal is further consolidated by C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 22807829      PMCID: PMC3393272          DOI: 10.1107/S1600536812024294

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of thia­zolidin-4-one derivatives, see: Previtera et al. (1994) ▶; Sharma et al. (2000 ▶); Kato et al. (1999a ▶,b ▶); Tanabe et al. (1991 ▶); Rawal et al. (2005 ▶); Voss et al. (2003 ▶). For related structures, see: Fun et al. (2011 ▶); Ooi et al. (2012 ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C21H19ClN2OS M = 382.89 Monoclinic, a = 9.1139 (3) Å b = 17.4562 (6) Å c = 12.9246 (4) Å β = 118.640 (2)° V = 1804.64 (10) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 100 K 0.37 × 0.25 × 0.18 mm

Data collection

Bruker APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.886, T max = 0.942 23788 measured reflections 5231 independent reflections 4605 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.083 S = 1.05 5231 reflections 235 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAIn class="Chemical">NT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024294/hb6814sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024294/hb6814Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024294/hb6814Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H19ClN2OSF(000) = 800
Mr = 382.89Dx = 1.409 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9952 reflections
a = 9.1139 (3) Åθ = 2.6–34.3°
b = 17.4562 (6) ŵ = 0.34 mm1
c = 12.9246 (4) ÅT = 100 K
β = 118.640 (2)°Block, colourless
V = 1804.64 (10) Å30.37 × 0.25 × 0.18 mm
Z = 4
Bruker APEX DUO CCD diffractometer5231 independent reflections
Radiation source: fine-focus sealed tube4605 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 30.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −12→12
Tmin = 0.886, Tmax = 0.942k = −24→24
23788 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.083H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0385P)2 + 0.767P] where P = (Fo2 + 2Fc2)/3
5231 reflections(Δ/σ)max = 0.002
235 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.21570 (4)−0.051642 (15)1.02340 (2)0.02160 (7)
S10.24459 (4)0.363135 (15)0.69867 (2)0.01731 (7)
O10.04486 (10)0.16687 (5)0.56961 (7)0.01895 (16)
N10.27625 (11)0.31077 (5)0.90882 (7)0.01307 (16)
N20.18040 (11)0.22633 (5)0.74984 (7)0.01253 (16)
C10.63915 (13)0.29044 (6)1.06753 (10)0.0170 (2)
H1A0.61050.31300.99330.020*
C20.75211 (14)0.22981 (7)1.10844 (11)0.0220 (2)
H2A0.79900.21111.06170.026*
C30.79679 (15)0.19637 (7)1.21700 (12)0.0277 (3)
H3A0.87340.15481.24440.033*
C40.72833 (16)0.22428 (8)1.28510 (12)0.0282 (3)
H4A0.76000.20241.36020.034*
C50.61355 (15)0.28412 (7)1.24385 (10)0.0219 (2)
H5A0.56580.30191.29060.026*
C60.56708 (13)0.31871 (6)1.13445 (9)0.01562 (19)
C70.44377 (13)0.38247 (6)1.08949 (9)0.01487 (19)
C80.43293 (14)0.43351 (7)1.16306 (10)0.0214 (2)
H8A0.50730.42761.24500.026*
C90.31193 (16)0.49927 (7)1.12570 (11)0.0255 (2)
H9A0.37140.54601.16890.031*
H9B0.22330.48791.14700.031*
C100.23143 (15)0.51445 (6)0.99322 (11)0.0214 (2)
H10A0.13240.54780.96850.026*
H10B0.31200.54110.97480.026*
C110.17912 (13)0.43895 (6)0.92644 (9)0.01592 (19)
H11A0.11970.44920.84060.019*
H11B0.10130.41180.94700.019*
C120.33162 (13)0.38816 (6)0.95671 (9)0.01352 (18)
H12A0.39710.41070.92040.016*
C130.23863 (12)0.29844 (6)0.80285 (9)0.01265 (18)
C140.15339 (14)0.29402 (6)0.58042 (9)0.0176 (2)
H14A0.04860.31460.51510.021*
H14B0.23180.28280.54960.021*
C150.11748 (13)0.22186 (6)0.62889 (9)0.01409 (18)
C160.18581 (12)0.16066 (6)0.81802 (8)0.01233 (18)
C170.04100 (13)0.11881 (6)0.78834 (9)0.01434 (18)
H17A−0.06320.13500.72540.017*
C180.05075 (14)0.05291 (6)0.85211 (9)0.01572 (19)
H18A−0.04640.02320.83240.019*
C190.20399 (14)0.03118 (6)0.94472 (9)0.01523 (19)
C200.34831 (13)0.07366 (6)0.97650 (9)0.01584 (19)
H20A0.45160.05861.04150.019*
C210.33872 (13)0.13850 (6)0.91151 (9)0.01426 (18)
H21A0.43640.16780.93080.017*
U11U22U33U12U13U23
Cl10.02893 (14)0.01406 (12)0.02091 (13)0.00025 (10)0.01122 (11)0.00494 (9)
S10.02495 (14)0.01306 (12)0.01514 (12)−0.00279 (9)0.01059 (10)0.00118 (9)
O10.0237 (4)0.0184 (4)0.0148 (3)−0.0037 (3)0.0093 (3)−0.0040 (3)
N10.0136 (4)0.0108 (4)0.0129 (4)−0.0009 (3)0.0049 (3)−0.0001 (3)
N20.0156 (4)0.0107 (4)0.0104 (4)−0.0015 (3)0.0054 (3)0.0001 (3)
C10.0138 (4)0.0152 (5)0.0193 (5)−0.0023 (4)0.0058 (4)−0.0026 (4)
C20.0135 (5)0.0173 (5)0.0327 (6)−0.0014 (4)0.0090 (4)−0.0048 (4)
C30.0154 (5)0.0196 (6)0.0383 (7)0.0030 (4)0.0051 (5)0.0053 (5)
C40.0227 (6)0.0273 (6)0.0253 (6)0.0023 (5)0.0041 (5)0.0089 (5)
C50.0188 (5)0.0248 (6)0.0184 (5)0.0007 (4)0.0059 (4)0.0025 (4)
C60.0122 (4)0.0149 (5)0.0157 (4)−0.0018 (4)0.0034 (4)−0.0015 (4)
C70.0127 (4)0.0149 (5)0.0143 (4)−0.0010 (4)0.0043 (4)−0.0012 (4)
C80.0194 (5)0.0224 (5)0.0171 (5)0.0011 (4)0.0045 (4)−0.0055 (4)
C90.0251 (6)0.0211 (6)0.0260 (6)0.0029 (5)0.0088 (5)−0.0091 (4)
C100.0212 (5)0.0129 (5)0.0277 (6)0.0013 (4)0.0096 (4)−0.0018 (4)
C110.0156 (4)0.0126 (4)0.0164 (4)0.0015 (4)0.0050 (4)0.0015 (4)
C120.0148 (4)0.0107 (4)0.0133 (4)−0.0016 (3)0.0053 (4)−0.0008 (3)
C130.0126 (4)0.0107 (4)0.0139 (4)−0.0001 (3)0.0057 (3)0.0013 (3)
C140.0244 (5)0.0163 (5)0.0137 (4)−0.0018 (4)0.0103 (4)0.0002 (4)
C150.0150 (4)0.0160 (5)0.0124 (4)0.0007 (4)0.0075 (4)−0.0002 (3)
C160.0154 (4)0.0103 (4)0.0113 (4)0.0003 (3)0.0064 (3)−0.0002 (3)
C170.0145 (4)0.0146 (4)0.0122 (4)−0.0008 (4)0.0050 (3)−0.0008 (3)
C180.0176 (5)0.0144 (5)0.0149 (4)−0.0038 (4)0.0076 (4)−0.0019 (4)
C190.0222 (5)0.0100 (4)0.0143 (4)0.0010 (4)0.0093 (4)0.0008 (3)
C200.0162 (4)0.0142 (5)0.0153 (4)0.0034 (4)0.0061 (4)0.0008 (4)
C210.0133 (4)0.0132 (4)0.0156 (4)−0.0001 (3)0.0064 (4)−0.0009 (3)
Cl1—C191.7411 (11)C8—H8A0.9500
S1—C131.7780 (10)C9—C101.5284 (18)
S1—C141.8067 (11)C9—H9A0.9900
O1—C151.2084 (13)C9—H9B0.9900
N1—C131.2608 (13)C10—C111.5215 (15)
N1—C121.4707 (13)C10—H10A0.9900
N2—C151.3854 (12)C10—H10B0.9900
N2—C131.4096 (13)C11—C121.5329 (14)
N2—C161.4322 (13)C11—H11A0.9900
C1—C21.3921 (15)C11—H11B0.9900
C1—C61.4027 (15)C12—H12A1.0000
C1—H1A0.9500C14—C151.5110 (15)
C2—C31.3883 (19)C14—H14A0.9900
C2—H2A0.9500C14—H14B0.9900
C3—C41.388 (2)C16—C171.3920 (14)
C3—H3A0.9500C16—C211.3920 (14)
C4—C51.3911 (17)C17—C181.3929 (14)
C4—H4A0.9500C17—H17A0.9500
C5—C61.4032 (15)C18—C191.3873 (15)
C5—H5A0.9500C18—H18A0.9500
C6—C71.4878 (15)C19—C201.3895 (15)
C7—C81.3408 (15)C20—C211.3871 (14)
C7—C121.5226 (14)C20—H20A0.9500
C8—C91.5021 (17)C21—H21A0.9500
C13—S1—C1492.74 (5)C10—C11—H11A109.5
C13—N1—C12118.28 (9)C12—C11—H11A109.5
C15—N2—C13117.03 (8)C10—C11—H11B109.5
C15—N2—C16121.51 (8)C12—C11—H11B109.5
C13—N2—C16121.45 (8)H11A—C11—H11B108.0
C2—C1—C6120.85 (11)N1—C12—C7108.91 (8)
C2—C1—H1A119.6N1—C12—C11109.73 (8)
C6—C1—H1A119.6C7—C12—C11111.23 (8)
C3—C2—C1120.59 (11)N1—C12—H12A109.0
C3—C2—H2A119.7C7—C12—H12A109.0
C1—C2—H2A119.7C11—C12—H12A109.0
C2—C3—C4119.33 (11)N1—C13—N2121.56 (9)
C2—C3—H3A120.3N1—C13—S1128.54 (8)
C4—C3—H3A120.3N2—C13—S1109.89 (7)
C3—C4—C5120.29 (12)C15—C14—S1108.01 (7)
C3—C4—H4A119.9C15—C14—H14A110.1
C5—C4—H4A119.9S1—C14—H14A110.1
C4—C5—C6121.17 (12)C15—C14—H14B110.1
C4—C5—H5A119.4S1—C14—H14B110.1
C6—C5—H5A119.4H14A—C14—H14B108.4
C1—C6—C5117.75 (10)O1—C15—N2124.39 (10)
C1—C6—C7120.77 (10)O1—C15—C14124.13 (9)
C5—C6—C7121.48 (10)N2—C15—C14111.47 (9)
C8—C7—C6121.25 (10)C17—C16—C21121.06 (9)
C8—C7—C12121.21 (10)C17—C16—N2120.14 (9)
C6—C7—C12117.54 (9)C21—C16—N2118.78 (9)
C7—C8—C9124.89 (10)C16—C17—C18119.16 (9)
C7—C8—H8A117.6C16—C17—H17A120.4
C9—C8—H8A117.6C18—C17—H17A120.4
C8—C9—C10112.15 (10)C19—C18—C17119.25 (10)
C8—C9—H9A109.2C19—C18—H18A120.4
C10—C9—H9A109.2C17—C18—H18A120.4
C8—C9—H9B109.2C18—C19—C20121.87 (10)
C10—C9—H9B109.2C18—C19—Cl1119.04 (8)
H9A—C9—H9B107.9C20—C19—Cl1119.09 (8)
C11—C10—C9109.69 (10)C21—C20—C19118.72 (10)
C11—C10—H10A109.7C21—C20—H20A120.6
C9—C10—H10A109.7C19—C20—H20A120.6
C11—C10—H10B109.7C20—C21—C16119.91 (10)
C9—C10—H10B109.7C20—C21—H21A120.0
H10A—C10—H10B108.2C16—C21—H21A120.0
C10—C11—C12110.92 (9)
C6—C1—C2—C3−0.49 (17)C15—N2—C13—N1170.00 (9)
C1—C2—C3—C4−0.36 (18)C16—N2—C13—N1−9.89 (15)
C2—C3—C4—C51.30 (19)C15—N2—C13—S1−9.15 (11)
C3—C4—C5—C6−1.42 (19)C16—N2—C13—S1170.96 (7)
C2—C1—C6—C50.38 (16)C14—S1—C13—N1−175.13 (10)
C2—C1—C6—C7−178.76 (10)C14—S1—C13—N23.95 (8)
C4—C5—C6—C10.56 (17)C13—S1—C14—C151.41 (8)
C4—C5—C6—C7179.69 (11)C13—N2—C15—O1−170.49 (10)
C1—C6—C7—C8−147.73 (11)C16—N2—C15—O19.40 (16)
C5—C6—C7—C833.17 (16)C13—N2—C15—C1410.39 (13)
C1—C6—C7—C1231.62 (14)C16—N2—C15—C14−169.72 (9)
C5—C6—C7—C12−147.49 (10)S1—C14—C15—O1174.28 (9)
C6—C7—C8—C9−179.63 (11)S1—C14—C15—N2−6.60 (11)
C12—C7—C8—C91.05 (18)C15—N2—C16—C17−54.52 (13)
C7—C8—C9—C10−14.39 (18)C13—N2—C16—C17125.37 (10)
C8—C9—C10—C1144.28 (14)C15—N2—C16—C21123.55 (10)
C9—C10—C11—C12−63.22 (12)C13—N2—C16—C21−56.56 (13)
C13—N1—C12—C7−153.55 (9)C21—C16—C17—C18−1.28 (15)
C13—N1—C12—C1184.48 (11)N2—C16—C17—C18176.74 (9)
C8—C7—C12—N1−139.34 (11)C16—C17—C18—C190.93 (15)
C6—C7—C12—N141.32 (12)C17—C18—C19—C200.53 (16)
C8—C7—C12—C11−18.28 (14)C17—C18—C19—Cl1−179.52 (8)
C6—C7—C12—C11162.38 (9)C18—C19—C20—C21−1.63 (16)
C10—C11—C12—N1169.61 (9)Cl1—C19—C20—C21178.41 (8)
C10—C11—C12—C749.04 (12)C19—C20—C21—C161.27 (15)
C12—N1—C13—N2−178.32 (9)C17—C16—C21—C200.16 (15)
C12—N1—C13—S10.66 (14)N2—C16—C21—C20−177.89 (9)
D—H···AD—HH···AD···AD—H···A
C10—H10A···O1i0.992.533.4814 (17)161
C11—H11B···O1ii0.992.333.2411 (14)152
C14—H14B···N1iii0.992.623.4496 (14)141
C17—H17A···Cg1iv0.952.813.5913 (13)140
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10A⋯O1i 0.992.533.4814 (17)161
C11—H11B⋯O1ii 0.992.333.2411 (14)152
C14—H14B⋯N1iii 0.992.623.4496 (14)141
C17—H17ACg1iv 0.952.813.5913 (13)140

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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