Literature DB >> 22904942

(1S,3R,8R)-2,2-Dibromo-3,7,7,10-tetra-methyl-tricyclo-[6.4.0.0(1,3)]dodec-9-ene.

Ahmed Benharref, Lahcen El Ammari, Essêdiya Lassaba, Najia Ourhriss, Moha Berraho.   

Abstract

The title compound, C(16)H(24)Br(2), was synthesized from β-himachalene (3,5,5,9-tetra-methyl-2,4a,5,6,7,8-hexa-hydro-1H-benzocyclo-heptene), which was isolated from the essential oil of the Atlas cedar (Cedrus Atlantica). The mol-ecule is built up from two fused six- and seven-membered rings and an additional three-membered ring from the reaction of β-himachalene with dibromo-carbene. The six-membered ring shows a screw-boat conformation, whereas the seven-membered ring displays a boat conformation; the dihedral angle between the mean planes through the rings is 57.9 (4)°. The absolute structure was established unambiguously from anomalous dispersion effects.

Entities:  

Year:  2012        PMID: 22904942      PMCID: PMC3414955          DOI: 10.1107/S1600536812032333

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isolation of β-himachalene, see: Joseph & Dev (1968 ▶); Plattier & Teiseire (1974 ▶). For the reactivity of this sesquiterpene, see: Lassaba et al. (1997 ▶); Chekroun et al. (2000 ▶); El Jamili et al. (2002 ▶); Sbai et al. (2002 ▶); Dakir et al. (2004 ▶). For its biological activity, see: Daoubi et al. (2004 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C16H24Br2 M = 376.17 Orthorhombic, a = 9.7464 (14) Å b = 12.1633 (16) Å c = 13.5352 (18) Å V = 1604.6 (4) Å3 Z = 4 Mo Kα radiation μ = 5.04 mm−1 T = 298 K 0.78 × 0.66 × 0.24 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.259, T max = 0.746 17190 measured reflections 3254 independent reflections 2281 reflections with I > 2σ(I) R int = 0.086

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.132 S = 1.06 3254 reflections 167 parameters H-atom parameters constrained Δρmax = 0.85 e Å−3 Δρmin = −1.05 e Å−3 Absolute structure: Flack (1983 ▶), 1380 Friedel pairs Flack parameter: 0.07 (2) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT-Plus (Bruker, 2009 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032333/im2394sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032333/im2394Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812032333/im2394Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H24Br2F(000) = 760
Mr = 376.17Dx = 1.557 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 17190 reflections
a = 9.7464 (14) Åθ = 2.6–26.4°
b = 12.1633 (16) ŵ = 5.04 mm1
c = 13.5352 (18) ÅT = 298 K
V = 1604.6 (4) Å3Prism, colourless
Z = 40.78 × 0.66 × 0.24 mm
Bruker APEXII CCD diffractometer3254 independent reflections
Radiation source: fine-focus sealed tube2281 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.086
ω and φ scansθmax = 26.4°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −12→12
Tmin = 0.259, Tmax = 0.746k = −15→15
17190 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.132w = 1/[σ2(Fo2) + (0.0682P)2 + 0.6114P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3254 reflectionsΔρmax = 0.85 e Å3
167 parametersΔρmin = −1.05 e Å3
0 restraintsAbsolute structure: Flack (1983), 1380 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.07 (2)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3347 (7)0.6855 (4)0.2295 (4)0.0321 (13)
C20.4162 (7)0.7675 (5)0.1685 (5)0.0368 (15)
C30.3869 (8)0.6562 (5)0.1251 (5)0.0413 (15)
C40.2801 (8)0.6488 (6)0.0455 (5)0.0486 (19)
H4A0.32510.6479−0.01850.058*
H4B0.22210.71350.04820.058*
C50.1901 (11)0.5455 (7)0.0554 (6)0.067 (2)
H5A0.23690.48420.02430.080*
H5B0.10490.55750.01990.080*
C60.1559 (10)0.5140 (6)0.1633 (6)0.062 (2)
H6A0.24040.49060.19480.074*
H6B0.09530.45070.16160.074*
C70.0886 (7)0.6022 (6)0.2302 (5)0.0480 (17)
C80.1814 (6)0.7070 (5)0.2427 (4)0.0340 (13)
H80.15500.75760.18970.041*
C90.1592 (8)0.7681 (5)0.3381 (5)0.0457 (17)
H90.07430.80160.34710.055*
C100.2497 (7)0.7784 (5)0.4100 (5)0.0424 (17)
C110.3862 (7)0.7238 (5)0.4053 (4)0.0399 (16)
H11A0.40290.68700.46780.048*
H11B0.45610.77980.39740.048*
C120.4011 (8)0.6409 (4)0.3229 (4)0.0349 (14)
H12A0.35760.57230.34170.042*
H12B0.49760.62650.31090.042*
C130.2240 (10)0.8474 (8)0.4997 (7)0.075 (3)
H13A0.13710.88390.49320.113*
H13B0.29550.90130.50600.113*
H13C0.22290.80140.55730.113*
C140.0598 (10)0.5426 (7)0.3284 (7)0.072 (3)
H14A0.00600.47790.31590.108*
H14B0.01030.59070.37180.108*
H14C0.14510.52190.35860.108*
C15−0.0479 (10)0.6373 (8)0.1882 (9)0.092 (3)
H15A−0.03450.66720.12320.138*
H15B−0.08800.69230.23010.138*
H15C−0.10790.57490.18440.138*
C160.5021 (8)0.5748 (6)0.1134 (6)0.058 (2)
H16A0.54820.58760.05180.088*
H16B0.46560.50150.11420.088*
H16C0.56600.58340.16680.088*
Br10.33615 (9)0.89924 (6)0.11733 (6)0.0589 (3)
Br20.60263 (7)0.80174 (6)0.20570 (6)0.0556 (2)
U11U22U33U12U13U23
C10.037 (3)0.027 (3)0.033 (3)0.000 (3)−0.005 (3)0.001 (2)
C20.039 (4)0.036 (3)0.035 (3)−0.004 (3)−0.003 (3)0.006 (2)
C30.045 (4)0.043 (3)0.036 (3)−0.005 (3)0.003 (4)−0.002 (3)
C40.060 (6)0.056 (4)0.030 (3)−0.016 (4)−0.007 (4)−0.002 (3)
C50.081 (7)0.074 (5)0.046 (4)−0.020 (5)−0.010 (5)−0.015 (4)
C60.071 (6)0.056 (4)0.058 (4)−0.021 (4)−0.011 (5)−0.006 (4)
C70.038 (4)0.058 (4)0.048 (4)−0.012 (4)−0.003 (4)0.004 (3)
C80.028 (4)0.040 (3)0.034 (3)0.000 (3)−0.004 (3)0.003 (2)
C90.031 (4)0.041 (3)0.065 (4)0.007 (3)0.017 (4)−0.008 (3)
C100.039 (4)0.048 (4)0.040 (4)−0.012 (3)0.007 (3)−0.007 (3)
C110.038 (4)0.052 (4)0.030 (3)−0.001 (3)−0.007 (3)−0.002 (2)
C120.036 (4)0.033 (3)0.036 (3)0.002 (3)−0.001 (3)0.002 (2)
C130.067 (6)0.089 (6)0.070 (6)−0.011 (5)0.019 (5)−0.045 (5)
C140.063 (6)0.076 (5)0.077 (6)−0.025 (4)−0.004 (5)0.013 (4)
C150.051 (6)0.099 (7)0.127 (9)−0.014 (5)−0.034 (7)0.009 (6)
C160.059 (5)0.057 (4)0.060 (5)0.009 (4)0.023 (4)−0.012 (4)
Br10.0687 (6)0.0419 (3)0.0662 (5)−0.0017 (4)−0.0037 (4)0.0198 (3)
Br20.0369 (4)0.0639 (4)0.0661 (5)−0.0149 (3)0.0047 (4)0.0019 (4)
C1—C21.519 (8)C8—H80.9800
C1—C121.520 (8)C9—C101.319 (10)
C1—C81.527 (9)C9—H90.9300
C1—C31.545 (9)C10—C111.488 (10)
C2—C31.503 (8)C10—C131.497 (9)
C2—Br11.913 (6)C11—C121.510 (8)
C2—Br21.931 (7)C11—H11A0.9700
C3—C41.501 (10)C11—H11B0.9700
C3—C161.505 (10)C12—H12A0.9700
C4—C51.539 (11)C12—H12B0.9700
C4—H4A0.9700C13—H13A0.9600
C4—H4B0.9700C13—H13B0.9600
C5—C61.546 (12)C13—H13C0.9600
C5—H5A0.9700C14—H14A0.9600
C5—H5B0.9700C14—H14B0.9600
C6—C71.550 (11)C14—H14C0.9600
C6—H6A0.9700C15—H15A0.9600
C6—H6B0.9700C15—H15B0.9600
C7—C151.508 (12)C15—H15C0.9600
C7—C141.539 (11)C16—H16A0.9600
C7—C81.573 (9)C16—H16B0.9600
C8—C91.506 (9)C16—H16C0.9600
C2—C1—C12117.6 (6)C9—C8—H8106.2
C2—C1—C8117.5 (5)C1—C8—H8106.2
C12—C1—C8112.4 (5)C7—C8—H8106.2
C2—C1—C358.8 (4)C10—C9—C8125.7 (6)
C12—C1—C3122.6 (5)C10—C9—H9117.2
C8—C1—C3118.0 (5)C8—C9—H9117.2
C3—C2—C161.5 (4)C9—C10—C11121.6 (6)
C3—C2—Br1122.4 (5)C9—C10—C13122.6 (7)
C1—C2—Br1122.2 (5)C11—C10—C13115.7 (7)
C3—C2—Br2118.4 (5)C10—C11—C12114.6 (6)
C1—C2—Br2119.5 (4)C10—C11—H11A108.6
Br1—C2—Br2107.3 (3)C12—C11—H11A108.6
C4—C3—C2117.8 (6)C10—C11—H11B108.6
C4—C3—C16113.8 (6)C12—C11—H11B108.6
C2—C3—C16119.4 (7)H11A—C11—H11B107.6
C4—C3—C1116.3 (6)C11—C12—C1109.6 (5)
C2—C3—C159.8 (4)C11—C12—H12A109.8
C16—C3—C1119.6 (6)C1—C12—H12A109.8
C3—C4—C5112.4 (6)C11—C12—H12B109.8
C3—C4—H4A109.1C1—C12—H12B109.8
C5—C4—H4A109.1H12A—C12—H12B108.2
C3—C4—H4B109.1C10—C13—H13A109.5
C5—C4—H4B109.1C10—C13—H13B109.5
H4A—C4—H4B107.8H13A—C13—H13B109.5
C4—C5—C6114.1 (6)C10—C13—H13C109.5
C4—C5—H5A108.7H13A—C13—H13C109.5
C6—C5—H5A108.7H13B—C13—H13C109.5
C4—C5—H5B108.7C7—C14—H14A109.5
C6—C5—H5B108.7C7—C14—H14B109.5
H5A—C5—H5B107.6H14A—C14—H14B109.5
C5—C6—C7118.2 (7)C7—C14—H14C109.5
C5—C6—H6A107.8H14A—C14—H14C109.5
C7—C6—H6A107.8H14B—C14—H14C109.5
C5—C6—H6B107.8C7—C15—H15A109.5
C7—C6—H6B107.8C7—C15—H15B109.5
H6A—C6—H6B107.1H15A—C15—H15B109.5
C15—C7—C14107.4 (8)C7—C15—H15C109.5
C15—C7—C6110.4 (7)H15A—C15—H15C109.5
C14—C7—C6104.8 (6)H15B—C15—H15C109.5
C15—C7—C8108.6 (6)C3—C16—H16A109.5
C14—C7—C8113.2 (6)C3—C16—H16B109.5
C6—C7—C8112.3 (6)H16A—C16—H16B109.5
C9—C8—C1109.0 (5)C3—C16—H16C109.5
C9—C8—C7114.2 (5)H16A—C16—H16C109.5
C1—C8—C7114.3 (5)H16B—C16—H16C109.5
  4 in total

1.  Regio- and stereoselectivity of beta-himachalene epoxidation by m-CPBA. A theoretical study.

Authors:  A Chekroun; A Jarid; A Benharref; A Boutalib
Journal:  J Org Chem       Date:  2000-07-14       Impact factor: 4.354

2.  Screening study for potential lead compounds for natural product-based fungicides: I. Synthesis and in vitro evaluation of coumarins against Botrytis cinerea.

Authors:  Mourad Daoubi; Rosa Durán-Patrón; Mohamed Hmamouchi; Rosario Hernández-Galán; Ahmed Benharref; Isidro G Collado
Journal:  Pest Manag Sci       Date:  2004-09       Impact factor: 4.845

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  (1S,3R,8S,9S,10R)-2,2-Dichloro-9,10-epoxy-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecane and (1S,3R,8S,10R)-2,2-dichloro-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecan-9-one.

Authors:  F Sbai; M Dakir; A Auhmani; H El Jamili; M Akssira; A Benharref; A Kenz; M Pierrot
Journal:  Acta Crystallogr C       Date:  2002-07-31       Impact factor: 1.172

  4 in total
  2 in total

1.  (1S,3R,8R)-2,2-Di-chloro-3,7,7,10-tetra-methyl-tri-cyclo-[6.4.0.0(1,3)]dodec-9-en-11-one.

Authors:  Naja Ourhriss; Ahmed Benharref; Abdelouahd Oukhrib; Jean-Claude Daran; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-04

2.  (1R,3S,8R)-3,7,7,10-Tetra-methyl-tri-cyclo-[6.4.0.0(1,3)]dodec-9-en-11-one.

Authors:  Abdoullah Bimoussa; Aziz Auhmani; My Youssef Ait Itto; Jean-Claude Daran; Auhmani Abdelwahed
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-12-21
  2 in total

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