Literature DB >> 24527013

(1R,3S,8R)-3,7,7,10-Tetra-methyl-tri-cyclo-[6.4.0.0(1,3)]dodec-9-en-11-one.

Abdoullah Bimoussa1, Aziz Auhmani1, My Youssef Ait Itto1, Jean-Claude Daran2, Auhmani Abdelwahed1.   

Abstract

The absolute configuration of the title compound, C16H24O, has been deduced from the chemical pathway. The six-membered ring has a roughly half-chair conformation with the quaternary C atom as the flap. The seven-membered ring displays a chair conformation. In the crystal, there is a weak C-H⋯O hydrogen bond between the methyl-ene group of the cyclo-propane ring and the carbonyl group of a screw-axis-related mol-ecule, which builds up a zigzag-like chain along the b-axis direction.

Entities:  

Year:  2013        PMID: 24527013      PMCID: PMC3914107          DOI: 10.1107/S1600536813034041

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Benharref et al. (2012 ▶); Gassman & Gorman (1990 ▶); Lassaba et al. (1997 ▶). For ring puckering analysis, see: Cremer & Pople (1975 ▶). For structural discussion, see: Evans & Boeyens (1989 ▶); Spek (2009 ▶). For chemical properties, see: Auhmani et al. (2002 ▶); Danyang et al. (2007 ▶); Tetsuhiro et al. (2003 ▶).

Experimental

Crystal data

C16H24O M = 232.35 Monoclinic, a = 6.4379 (2) Å b = 7.8889 (3) Å c = 13.5122 (5) Å β = 97.430 (2)° V = 680.49 (4) Å3 Z = 2 Mo Kα radiation μ = 0.07 mm−1 T = 180 K 0.38 × 0.23 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.661, T max = 0.747 15568 measured reflections 4902 independent reflections 4331 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.111 S = 1.04 4902 reflections 158 parameters 1 restraint H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2012 ▶); cell refinement: SAINT (Bruker, 2012 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL2013. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813034041/fy2107sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034041/fy2107Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034041/fy2107Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H24OF(000) = 256
Mr = 232.35Dx = 1.134 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 7217 reflections
a = 6.4379 (2) Åθ = 3.0–33.0°
b = 7.8889 (3) ŵ = 0.07 mm1
c = 13.5122 (5) ÅT = 180 K
β = 97.430 (2)°Plate, colourless
V = 680.49 (4) Å30.38 × 0.23 × 0.08 mm
Z = 2
Bruker APEXII CCD diffractometer4902 independent reflections
Radiation source: sealed tube4331 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
φ and ω scansθmax = 33.2°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −9→9
Tmin = 0.661, Tmax = 0.747k = −12→12
15568 measured reflectionsl = −20→20
Refinement on F21 restraint
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.111w = 1/[σ2(Fo2) + (0.0667P)2 + 0.0218P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
4902 reflectionsΔρmax = 0.30 e Å3
158 parametersΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.31651 (18)0.79421 (18)0.28074 (9)0.0192 (2)
C20.2552 (2)0.98024 (19)0.27484 (11)0.0255 (3)
H2A0.11041.00880.24570.031*
H2B0.31591.05550.32970.031*
C30.40116 (18)0.91018 (18)0.20572 (9)0.0213 (3)
C40.3155 (2)0.8894 (2)0.09629 (10)0.0261 (3)
H4A0.37060.98210.05770.031*
H4B0.16110.90050.08880.031*
C50.3716 (2)0.7200 (2)0.05222 (11)0.0318 (3)
H5A0.51480.68760.08190.038*
H5B0.37270.7338−0.02050.038*
C60.2204 (3)0.5769 (2)0.07006 (11)0.0322 (3)
H6A0.25650.47780.03080.039*
H6B0.07800.61350.04170.039*
C70.2086 (2)0.51533 (19)0.17792 (10)0.0244 (3)
C80.14660 (17)0.66525 (17)0.24508 (9)0.0191 (2)
H80.03590.73040.20230.023*
C90.04465 (19)0.60496 (19)0.33343 (10)0.0236 (3)
H9−0.08700.54990.31910.028*
C100.1211 (2)0.6213 (2)0.42964 (11)0.0263 (3)
C110.3324 (2)0.6937 (2)0.45837 (10)0.0271 (3)
C120.4560 (2)0.7448 (2)0.37599 (10)0.0263 (3)
H12A0.54710.64930.36140.032*
H12B0.54740.84180.39880.032*
C130.6305 (2)0.9621 (2)0.22205 (12)0.0310 (3)
H13A0.66970.99410.29210.047*
H13B0.65211.05890.17910.047*
H13C0.71750.86690.20560.047*
C140.4145 (2)0.4307 (2)0.22037 (13)0.0352 (4)
H14A0.43830.33080.18020.053*
H14B0.40720.39600.28950.053*
H14C0.53010.51100.21860.053*
C150.0350 (3)0.3801 (2)0.16921 (14)0.0372 (4)
H15A0.03270.32510.23410.056*
H15B0.06260.29500.11970.056*
H15C−0.10070.43390.14830.056*
C160.0016 (3)0.5678 (3)0.51319 (14)0.0403 (4)
H16A−0.13220.51730.48520.060*
H16B−0.02460.66700.55340.060*
H16C0.08390.48430.55530.060*
O10.4059 (2)0.7093 (2)0.54568 (8)0.0492 (4)
U11U22U33U12U13U23
C10.0190 (4)0.0222 (6)0.0168 (5)−0.0001 (4)0.0033 (4)0.0009 (4)
C20.0287 (6)0.0230 (7)0.0263 (6)0.0003 (5)0.0095 (5)−0.0021 (5)
C30.0214 (5)0.0230 (7)0.0202 (6)0.0001 (4)0.0055 (4)0.0023 (5)
C40.0300 (6)0.0289 (7)0.0199 (6)0.0033 (5)0.0047 (4)0.0061 (5)
C50.0407 (7)0.0376 (9)0.0189 (6)0.0035 (6)0.0100 (5)−0.0003 (6)
C60.0446 (7)0.0312 (8)0.0208 (7)0.0009 (6)0.0043 (5)−0.0060 (6)
C70.0277 (5)0.0225 (7)0.0227 (6)0.0030 (5)0.0019 (4)−0.0019 (5)
C80.0175 (4)0.0214 (6)0.0181 (5)0.0022 (4)0.0015 (4)0.0013 (5)
C90.0205 (5)0.0246 (7)0.0263 (6)0.0004 (5)0.0057 (4)0.0040 (5)
C100.0284 (6)0.0277 (7)0.0242 (6)0.0020 (5)0.0082 (5)0.0070 (5)
C110.0308 (6)0.0311 (8)0.0190 (6)0.0015 (5)0.0019 (4)0.0064 (5)
C120.0225 (5)0.0371 (8)0.0185 (6)−0.0035 (5)0.0000 (4)0.0033 (5)
C130.0240 (5)0.0370 (9)0.0326 (7)−0.0047 (5)0.0061 (5)0.0056 (6)
C140.0369 (7)0.0299 (8)0.0390 (8)0.0146 (6)0.0056 (6)−0.0002 (6)
C150.0438 (8)0.0276 (8)0.0393 (8)−0.0068 (6)0.0020 (6)−0.0064 (7)
C160.0423 (7)0.0500 (11)0.0312 (8)−0.0022 (7)0.0150 (6)0.0136 (7)
O10.0509 (6)0.0765 (11)0.0185 (5)−0.0110 (7)−0.0021 (4)0.0070 (6)
C1—C31.5181 (18)C8—H81.0000
C1—C21.519 (2)C9—C101.336 (2)
C1—C121.5220 (18)C9—H90.9500
C1—C81.5255 (18)C10—C111.4796 (19)
C2—C31.5123 (17)C10—C161.5065 (19)
C2—H2A0.9900C11—O11.2192 (17)
C2—H2B0.9900C11—C121.5048 (18)
C3—C41.5186 (19)C12—H12A0.9900
C3—C131.5207 (17)C12—H12B0.9900
C4—C51.525 (2)C13—H13A0.9800
C4—H4A0.9900C13—H13B0.9800
C4—H4B0.9900C13—H13C0.9800
C5—C61.530 (2)C14—H14A0.9800
C5—H5A0.9900C14—H14B0.9800
C5—H5B0.9900C14—H14C0.9800
C6—C71.548 (2)C15—H15A0.9800
C6—H6A0.9900C15—H15B0.9800
C6—H6B0.9900C15—H15C0.9800
C7—C141.528 (2)C16—H16A0.9800
C7—C151.538 (2)C16—H16B0.9800
C7—C81.5733 (18)C16—H16C0.9800
C8—C91.5115 (17)
C3—C1—C259.73 (9)C1—C8—C7117.29 (9)
C3—C1—C12119.71 (10)C9—C8—H8105.6
C2—C1—C12114.38 (12)C1—C8—H8105.6
C3—C1—C8119.72 (11)C7—C8—H8105.6
C2—C1—C8117.19 (10)C10—C9—C8126.53 (12)
C12—C1—C8114.63 (11)C10—C9—H9116.7
C3—C2—C160.10 (9)C8—C9—H9116.7
C3—C2—H2A117.8C9—C10—C11120.23 (11)
C1—C2—H2A117.8C9—C10—C16122.86 (13)
C3—C2—H2B117.8C11—C10—C16116.91 (14)
C1—C2—H2B117.8O1—C11—C10121.43 (13)
H2A—C2—H2B114.9O1—C11—C12120.82 (13)
C2—C3—C160.17 (9)C10—C11—C12117.73 (12)
C2—C3—C4117.69 (11)C11—C12—C1112.55 (10)
C1—C3—C4117.95 (11)C11—C12—H12A109.1
C2—C3—C13118.74 (12)C1—C12—H12A109.1
C1—C3—C13119.42 (11)C11—C12—H12B109.1
C4—C3—C13113.19 (11)C1—C12—H12B109.1
C3—C4—C5113.60 (12)H12A—C12—H12B107.8
C3—C4—H4A108.8C3—C13—H13A109.5
C5—C4—H4A108.8C3—C13—H13B109.5
C3—C4—H4B108.8H13A—C13—H13B109.5
C5—C4—H4B108.8C3—C13—H13C109.5
H4A—C4—H4B107.7H13A—C13—H13C109.5
C4—C5—C6113.40 (11)H13B—C13—H13C109.5
C4—C5—H5A108.9C7—C14—H14A109.5
C6—C5—H5A108.9C7—C14—H14B109.5
C4—C5—H5B108.9H14A—C14—H14B109.5
C6—C5—H5B108.9C7—C14—H14C109.5
H5A—C5—H5B107.7H14A—C14—H14C109.5
C5—C6—C7119.33 (13)H14B—C14—H14C109.5
C5—C6—H6A107.5C7—C15—H15A109.5
C7—C6—H6A107.5C7—C15—H15B109.5
C5—C6—H6B107.5H15A—C15—H15B109.5
C7—C6—H6B107.5C7—C15—H15C109.5
H6A—C6—H6B107.0H15A—C15—H15C109.5
C14—C7—C15108.17 (13)H15B—C15—H15C109.5
C14—C7—C6110.16 (12)C10—C16—H16A109.5
C15—C7—C6105.63 (12)C10—C16—H16B109.5
C14—C7—C8112.60 (11)H16A—C16—H16B109.5
C15—C7—C8109.25 (11)C10—C16—H16C109.5
C6—C7—C8110.74 (12)H16A—C16—H16C109.5
C9—C8—C1109.11 (10)H16B—C16—H16C109.5
C9—C8—C7112.79 (12)
C12—C1—C2—C3111.44 (11)C3—C1—C8—C767.20 (16)
C8—C1—C2—C3−110.21 (12)C2—C1—C8—C7136.14 (12)
C1—C2—C3—C4108.01 (14)C12—C1—C8—C7−85.61 (13)
C1—C2—C3—C13−109.34 (14)C14—C7—C8—C9−80.64 (14)
C12—C1—C3—C2−102.54 (14)C15—C7—C8—C939.58 (15)
C8—C1—C3—C2106.03 (12)C6—C7—C8—C9155.52 (11)
C2—C1—C3—C4−107.58 (13)C14—C7—C8—C147.41 (16)
C12—C1—C3—C4149.87 (13)C15—C7—C8—C1167.63 (12)
C8—C1—C3—C4−1.55 (17)C6—C7—C8—C1−76.43 (14)
C2—C1—C3—C13108.24 (15)C1—C8—C9—C10−17.09 (19)
C12—C1—C3—C135.7 (2)C7—C8—C9—C10115.13 (15)
C8—C1—C3—C13−145.73 (13)C8—C9—C10—C11−4.7 (2)
C2—C3—C4—C5−134.89 (13)C8—C9—C10—C16175.72 (16)
C1—C3—C4—C5−65.84 (15)C9—C10—C11—O1−179.74 (16)
C13—C3—C4—C580.48 (16)C16—C10—C11—O1−0.1 (2)
C3—C4—C5—C684.92 (16)C9—C10—C11—C12−0.8 (2)
C4—C5—C6—C7−65.63 (18)C16—C10—C11—C12178.82 (15)
C5—C6—C7—C14−66.50 (18)O1—C11—C12—C1−153.30 (16)
C5—C6—C7—C15176.90 (14)C10—C11—C12—C127.8 (2)
C5—C6—C7—C858.73 (16)C3—C1—C12—C11156.43 (13)
C3—C1—C8—C9−163.00 (11)C2—C1—C12—C1188.68 (15)
C2—C1—C8—C9−94.06 (13)C8—C1—C12—C11−50.76 (17)
C12—C1—C8—C944.19 (14)
D—H···AD—HH···AD···AD—H···A
C2—H2B···O1i0.992.603.541 (2)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2B⋯O1i 0.992.603.541 (2)160

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (1S,3R,8R)-2,2-Dibromo-3,7,7,10-tetra-methyl-tricyclo-[6.4.0.0(1,3)]dodec-9-ene.

Authors:  Ahmed Benharref; Lahcen El Ammari; Essêdiya Lassaba; Najia Ourhriss; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-21

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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