Literature DB >> 22904863

4-Cyano-1-methyl-pyridinium bromide.

Michael N Kammer, Joel T Mague, Lynn V Koplitz.   

Abstract

In the crystal of the title mol-ecular salt, C(7)H(7)N(2) (+)·Br(-), the cations form inversion dimers via weak pairwise C-H⋯N hydrogen bonds; their mean planes are separated by 0.292 (6) Å. Weak C-H⋯Br inter-actions involving all of the remaining H atoms tie the cations and anions together into sets of inter-penetrating sheets. The title compound is isostructural with its iodide analogue.

Entities:  

Year:  2012        PMID: 22904863      PMCID: PMC3414330          DOI: 10.1107/S1600536812030449

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the 4-cyano-1-methyl­pyridinium iodide salt, see: Kammer et al. (2012 ▶). For the structure of 3-cyano-1-methyl­pyridinium bromide, see: Mague et al. (2005 ▶). For the structure of 3-cyano-1-methyl­pyridinium chloride, see: Koplitz et al. (2003 ▶.

Experimental

Crystal data

C7H7N2 +·Br M = 199.06 Monoclinic, a = 4.5447 (16) Å b = 11.285 (4) Å c = 15.551 (6) Å β = 96.455 (5)° V = 792.5 (5) Å3 Z = 4 Mo Kα radiation μ = 5.11 mm−1 T = 100 K 0.26 × 0.22 × 0.13 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: numerical (SADABS; Bruker, 2009 ▶) T min = 0.351, T max = 0.563 12985 measured reflections 2050 independent reflections 1864 reflections with I > 2σ(I) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.073 S = 1.07 2050 reflections 92 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.72 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812030449/hb6887sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030449/hb6887Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812030449/hb6887Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H7N2+·BrF(000) = 392
Mr = 199.06Dx = 1.668 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9556 reflections
a = 4.5447 (16) Åθ = 2.6–29.1°
b = 11.285 (4) ŵ = 5.11 mm1
c = 15.551 (6) ÅT = 100 K
β = 96.455 (5)°Slab, yellow
V = 792.5 (5) Å30.26 × 0.22 × 0.13 mm
Z = 4
Bruker SMART APEX CCD diffractometer2050 independent reflections
Radiation source: fine-focus sealed tube1864 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.065
φ and ω scansθmax = 29.1°, θmin = 2.2°
Absorption correction: numerical (SADABS; Bruker, 2009)h = −6→6
Tmin = 0.351, Tmax = 0.563k = −15→15
12985 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.073H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.039P)2 + 0.1785P] where P = (Fo2 + 2Fc2)/3
2050 reflections(Δ/σ)max = 0.002
92 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.72 e Å3
Experimental. The diffraction data were obtained from 3 sets of 400 frames, each of width 0.5 °. in omega, colllected at phi = 0.00, 90.00 and 180.00 °. and 2 sets of 800 frames, each of width 0.45 ° in phi, collected at omega = -30.00 and 210.00 °. The scan time was 20sec/frame.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms were placed in calculated positions (C—H = 0.95 - 0.98 Å) and included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached carbon atoms.
xyzUiso*/Ueq
Br10.38940 (3)0.377230 (14)0.850526 (11)0.01629 (9)
N1−0.0140 (3)0.65445 (13)0.81550 (10)0.0142 (3)
N20.3192 (4)0.93928 (14)1.08002 (11)0.0246 (4)
C1−0.1282 (4)0.58354 (16)0.73879 (11)0.0181 (3)
H1A0.03220.53520.72020.027*
H1B−0.20440.63680.69170.027*
H1C−0.28810.53180.75370.027*
C20.1619 (4)0.74794 (15)0.80376 (11)0.0166 (3)
H20.21430.76550.74770.020*
C30.2658 (4)0.81810 (15)0.87348 (12)0.0180 (3)
H30.39350.88320.86630.022*
C40.1801 (4)0.79167 (15)0.95433 (11)0.0160 (3)
C50.0060 (4)0.69212 (15)0.96585 (12)0.0184 (3)
H5−0.04650.67171.02140.022*
C6−0.0873 (4)0.62429 (14)0.89416 (13)0.0172 (4)
H6−0.20430.55570.90030.021*
C70.2641 (5)0.87129 (15)1.02619 (14)0.0202 (4)
U11U22U33U12U13U23
Br10.01641 (13)0.01499 (12)0.01814 (14)−0.00147 (5)0.00490 (8)−0.00055 (5)
N10.0167 (7)0.0123 (6)0.0134 (7)0.0003 (5)0.0003 (5)−0.0007 (5)
N20.0304 (9)0.0227 (8)0.0205 (8)−0.0056 (6)0.0020 (7)−0.0010 (6)
C10.0250 (9)0.0148 (8)0.0142 (8)−0.0032 (6)0.0000 (7)−0.0033 (7)
C20.0178 (8)0.0160 (7)0.0161 (8)−0.0006 (6)0.0021 (6)0.0031 (6)
C30.0193 (8)0.0144 (7)0.0198 (9)−0.0036 (6)0.0002 (6)0.0025 (7)
C40.0172 (8)0.0148 (7)0.0156 (8)0.0009 (6)−0.0006 (6)0.0004 (6)
C50.0207 (8)0.0188 (8)0.0161 (8)−0.0014 (6)0.0034 (6)0.0018 (7)
C60.0203 (9)0.0157 (8)0.0156 (9)−0.0020 (6)0.0023 (7)0.0018 (6)
C70.0209 (10)0.0200 (9)0.0196 (10)−0.0022 (6)0.0018 (8)0.0030 (7)
N1—C61.347 (2)C2—H20.9500
N1—C21.349 (2)C3—C41.390 (2)
N1—C11.481 (2)C3—H30.9500
N2—C71.142 (3)C4—C51.397 (2)
C1—H1A0.9800C4—C71.451 (3)
C1—H1B0.9800C5—C61.379 (3)
C1—H1C0.9800C5—H50.9500
C2—C31.382 (2)C6—H60.9500
C6—N1—C2122.10 (15)C2—C3—H3120.6
C6—N1—C1119.66 (14)C4—C3—H3120.6
C2—N1—C1118.24 (14)C3—C4—C5120.59 (16)
N1—C1—H1A109.5C3—C4—C7119.17 (16)
N1—C1—H1B109.5C5—C4—C7120.19 (16)
H1A—C1—H1B109.5C6—C5—C4118.02 (16)
N1—C1—H1C109.5C6—C5—H5121.0
H1A—C1—H1C109.5C4—C5—H5121.0
H1B—C1—H1C109.5N1—C6—C5120.58 (15)
N1—C2—C3119.84 (16)N1—C6—H6119.7
N1—C2—H2120.1C5—C6—H6119.7
C3—C2—H2120.1N2—C7—C4175.7 (2)
C2—C3—C4118.74 (16)
C6—N1—C2—C3−1.9 (2)C3—C4—C5—C6−2.6 (2)
C1—N1—C2—C3178.19 (16)C7—C4—C5—C6175.03 (17)
N1—C2—C3—C4−1.4 (2)C2—N1—C6—C52.9 (3)
C2—C3—C4—C53.6 (2)C1—N1—C6—C5−177.16 (16)
C2—C3—C4—C7−174.06 (16)C4—C5—C6—N1−0.6 (3)
D—H···AD—HH···AD···AD—H···A
C3—H3···N2i0.952.483.357 (2)153
C5—H5···Br1ii0.952.723.626 (2)160
C6—H6···Br1iii0.952.783.6779 (19)157
C1—H1B···Br1iv0.982.893.735 (2)144
C1—H1C···Br1iii0.982.823.755 (2)160
C2—H2···Br1v0.952.793.6253 (18)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯N2i 0.952.483.357 (2)153
C5—H5⋯Br1ii 0.952.723.626 (2)160
C6—H6⋯Br1iii 0.952.783.6779 (19)157
C1—H1B⋯Br1iv 0.982.893.735 (2)144
C1—H1C⋯Br1iii 0.982.823.755 (2)160
C2—H2⋯Br1v 0.952.793.6253 (18)147

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  4 in total

1.  4-Cyano-1-methyl-pyridinium nitrate.

Authors:  Cameron A McCormick; Vu D Nguyen; Heather E Renfro; Lynn V Koplitz; Joel T Mague
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-31

2.  2-Cyano-1-methyl-pyridinium iodide.

Authors:  Michael N Kammer; Lynn V Koplitz; Joel T Mague
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-20

3.  4-Cyano-1-methyl-pyridinium perchlor-ate.

Authors:  Vu D Nguyen; Cameron A McCormick; Lynn V Koplitz; Joel T Mague
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-07

4.  Crystal structures of the hexa-fluorido-phosphate salts of the isomeric 2-, 3- and 4-cyano-1-methyl-pyridinium cations and determination of solid-state inter-action energies.

Authors:  Joel T Mague; Erin Larrabee; David Olivier; Francesca Vaccaro; Kevin E Riley; Lynn V Koplitz
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-08-24
  4 in total

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