| Literature DB >> 30225126 |
Joel T Mague1, Erin Larrabee2, David Olivier2, Francesca Vaccaro2, Kevin E Riley3, Lynn V Koplitz2.
Abstract
The synthesis and crystal structures of the isomeric mol-ecular salts 2-, 3- and 4-cyano-1-methyl-pyridinium hexa-fluorido-phosphate, C7H7N2+·PF6-, are reported. In 2-cyano-1-methyl-pyridinium hexa-fluorido-phosphate, C-H⋯F hydrogen bonds form chains extending along the c-axis direction, which are associated through C-H⋯F hydrogen bonds and P-F⋯π(ring) inter-actions into stepped layers. For 3-cyano-1-methyl-pyridinium hexa-fluorido-phosphate, corrugated sheets parallel to [001] are generated by C-H⋯F hydrogen bonds and P-F⋯π(ring) inter-actions. The sheets are weakly associated by a weak inter-action of the cyano group with the six-membered ring of the cation. In 4-cyano-1-methyl-pyridinium hexa-fluorido-phosphate, C-H⋯F hydrogen bonds form a more open three-dimensional network in which stacks of cations and of anions are aligned with the b-axis direction. Dispersion-corrected density functional theory (DFT-D) calculations were carried out in order to elucidate some of the energetic aspects of the solid-state structures. The results indicate that the distribution of charge within a mol-ecular ionic cation can play a large role in determining the strength of a cation-anion inter-action within a crystal structure. Crystals of 2-cyano-1-methyl-pyridinium hexa-fluorido-phosphate are twinned by a 180° rotation about the c* axis. The anion in 3-cyano-1-methyl-pyridinium hexa-fluorido-phosphate is rotationally disordered by 38.2 (1)° in an 0.848 (3):0.152 (3) ratio.Entities:
Keywords: DFT calculations; crystal structure; cyanopyridinium salts; hexafluoridophosphate; hydrogen bonds
Year: 2018 PMID: 30225126 PMCID: PMC6127719 DOI: 10.1107/S2056989018011003
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1Perspective view of 1 with labeling scheme and 50% probability ellipsoids.
Figure 2Perspective view of 2 with labeling scheme and 50% probability ellipsoids. Only the major orientation of the disordered anion is shown. The cation–anion interaction is indicated by a dashed line.
Figure 3Perspective view of 3 with labeling scheme and 50% probability ellipsoids.
Hydrogen-bond geometry (Å, °) for 1
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C1—H1 | 0.98 | 2.40 | 3.161 (3) | 134 |
| C1—H1 | 0.98 | 2.40 | 3.307 (3) | 154 |
| C4—H4⋯F6iii | 0.95 | 2.41 | 3.319 (3) | 160 |
| C5—H5⋯F5iv | 0.95 | 2.51 | 3.409 (3) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Figure 4Side view of two cation and anion columns in 1 projected onto (021). C—H⋯F hydrogen bonds are shown as black dashed lines and P—F⋯π(ring) interactions by blue dashed lines.
Figure 5Packing of 1 viewed along the a-axis direction with C—H⋯F hydrogen bonds shown as dashed lines.
Hydrogen-bond geometry (Å, °) for 2
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C1—H1 | 0.98 | 2.28 | 3.225 (5) | 161 |
| C2—H2⋯F6i | 0.95 | 2.34 | 3.253 (4) | 160 |
| C6—H6⋯F6ii | 0.95 | 2.53 | 3.389 (5) | 150 |
Symmetry codes: (i) ; (ii) .
Figure 6View of two adjacent cation–anion chains in 2 along the c-axis direction with C—H⋯F hydrogen bonds shown by black dashed lines.
Figure 7Packing of 2 viewed along the b-axis direction. C—H⋯F hydrogen bonds and P—F⋯π(ring) and C≡N⋯π(ring) interactions are shown, respectively, by black, blue and purple dashed lines.
Hydrogen-bond geometry (Å, °) for 3
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C5—H5⋯F5i | 0.95 | 2.37 | 3.247 (2) | 153 |
| C3—H3⋯F3ii | 0.95 | 2.46 | 3.106 (2) | 126 |
| C1—H1 | 0.98 | 2.51 | 3.208 (3) | 128 |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 8View of two adjacent cation–anion chains in 3 along the a-axis direction with C—H⋯F hydrogen bonds shown by black dashed lines.
Figure 9Packing of 3 viewed along the b-axis direction. C—H⋯F hydrogen bonds are shown by black dashed lines.
Figure 10Electrostatic potential maps (kcal mol−1) for the 4-CMP+ (left), 3-CMP+ (center) and 2-CMP+ (right) cations. Note the large range of 440 kcal mol−1. The strong electron-withdrawing ability of the cyano group results in a significantly less positive partial charge for that part of the molecular ion.
Figure 11Electrostatic potential map (kcal mol−1) for the hexafluoridophosphate anion. Note the relatively small range of 50 kcal mol−1.
Cation–anion interaction energies (kcal mol−1)
| Compound | Compound | Compound | |||
|---|---|---|---|---|---|
|
| Δ |
| Δ |
| Δ |
| C1—H1 | −19.0 | C1—H1 | −16.6 | C5—H5⋯F5vi | −14.2 |
| C1—H1 | −15.9 | C2—H2⋯F6iv | −16.6 | C3—H3⋯F3vii | −15.3 |
| C4—H4⋯F6 | −15.7 | C6—H6⋯F6v | −17.8 | C1—H1 | −16.7 |
| C5—H5⋯F5iii | −15.9 | ||||
Symmetry codes: (i) −x + , y + , −z + ; (ii) x + , −y + , z + ; (iii) −x + , y + , −z + ; (iv) −x + 1, y − , −z + ; (v) x + 1, y, z; (vi) −x + , −y, z − ; (vii) −x + 1, y + , −z + ; (viii) −x + , −y + 1, z − .
Figure 122-CMP+⋯PF6 − interactions. BLYP-D3/def2-TZVP/SMD interaction energies (kcal mol−1) for these complexes are: −19.0 (green), −16.9 (cyan), −15.9 (purple), and −15.7 (yellow).
Figure 134-CMP+⋯PF6 − interactions. BLYP-D3/def2-TZVP/SMD interaction energies (kcal mol−1) for these complexes are: −16.7 (green), −15.3 (cyan), −14.2 (purple).
Figure 143-CMP+⋯PF6 − interactions. BLYP-D3/def2-TZVP/SMD interaction energies (kcal mol−1) −17.8 for these complexes are: (green) and −16.6 (cyan).
Experimental details
|
|
|
| |
|---|---|---|---|
| Crystal data | |||
| Chemical formula | C7H7N2 +·PF6 − | C7H7N2 +·PF6 − | C7H7N2 +·PF6 − |
|
| 264.12 | 264.12 | 264.12 |
| Crystal system, space group | Monoclinic, | Orthorhombic, | Orthorhombic, |
| Temperature (K) | 150 | 150 | 150 |
|
| 6.5296 (5), 15.7145 (13), 9.5550 (7) | 7.8484 (2), 10.8964 (2), 11.8669 (3) | 8.5293 (6), 8.6264 (7), 13.3589 (10) |
| α, β, γ (°) | 90, 93.327 (4), 90 | 90, 90, 90 | 90, 90, 90 |
|
| 978.78 (13) | 1014.85 (4) | 982.91 (13) |
|
| 4 | 4 | 4 |
| Radiation type | Cu | Cu | Mo |
| μ (mm−1) | 3.21 | 3.09 | 0.34 |
| Crystal size (mm) | 0.20 × 0.17 × 0.06 | 0.26 × 0.19 × 0.15 | 0.26 × 0.19 × 0.13 |
| Data collection | |||
| Diffractometer | Bruker D8 VENTURE PHOTON 100 CMOS | Bruker D8 VENTURE PHOTON 100 CMOS | Bruker |
| Absorption correction | Multi-scan ( | Multi-scan ( | Multi-scan ( |
|
| 0.57, 0.84 | 0.59, 0.65 | 0.89, 0.96 |
| No. of measured, independent and observed [ | 12567, 1895, 1692 | 15204, 2009, 1970 | 19081, 2642, 2420 |
|
| 0.040 | 0.034 | 0.033 |
| (sin θ/λ)max (Å−1) | 0.618 | 0.618 | 0.686 |
| Refinement | |||
|
| 0.042, 0.115, 1.07 | 0.036, 0.095, 1.08 | 0.031, 0.084, 1.13 |
| No. of reflections | 1895 | 2009 | 2642 |
| No. of parameters | 147 | 160 | 146 |
| No. of restraints | 0 | 8 | 0 |
| H-atom treatment | H-atom parameters constrained | H-atom parameters constrained | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.31, −0.33 | 0.35, −0.36 | 0.31, −0.20 |
| Absolute structure | – | Flack | Flack |
| Absolute structure parameter | – | 0.040 (6) | −0.01 (3) |
Computer programs: APEX2 and SAINT (Bruker, 2015 ▸), CELL_NOW (Sheldrick, 2008b ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL (Sheldrick, 2015b ▸), DIAMOND (Brandenburg & Putz, 2012 ▸) and SHELXTL (Sheldrick, 2008a ▸).
| C7H7N2+·PF6− | |
| Monoclinic, | Cu |
| Cell parameters from 2191 reflections | |
| θ = 7.3–71.9° | |
| µ = 3.21 mm−1 | |
| β = 93.327 (4)° | |
| Plate, colourless | |
| 0.20 × 0.17 × 0.06 mm |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 1895 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 1692 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 72.4°, θmin = 5.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 12567 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1895 reflections | Δρmax = 0.31 e Å−3 |
| 147 parameters | Δρmin = −0.33 e Å−3 |
| 0 restraints | Extinction correction: SHELXL2014/7 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0045 (7) |
| Experimental. Analysis of 2191 reflections having I/σ(I) > 13 and chosen from the full
data set with |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. H-atoms were placed in
calculated positions (C—H = 0.95 - 0.98 Å) and included as riding
contributions with isotropic displacement parameters 1.2 - 1.5 times those
of the attached carbon atoms. Trial refinements with both the single-component
data extracted with |
| N1 | 0.4176 (3) | 0.86681 (11) | 0.80398 (18) | 0.0250 (4) | |
| N2 | −0.0598 (3) | 0.77157 (13) | 0.7824 (2) | 0.0388 (5) | |
| C1 | 0.3803 (4) | 0.85654 (16) | 0.9546 (2) | 0.0349 (5) | |
| H1A | 0.2619 | 0.8911 | 0.9776 | 0.052* | |
| H1B | 0.5018 | 0.8752 | 1.0115 | 0.052* | |
| H1C | 0.3527 | 0.7966 | 0.9743 | 0.052* | |
| C2 | 0.2757 (3) | 0.83897 (13) | 0.7044 (2) | 0.0256 (4) | |
| C3 | 0.3078 (4) | 0.84670 (14) | 0.5644 (2) | 0.0308 (5) | |
| H3 | 0.2084 | 0.8265 | 0.4957 | 0.037* | |
| C4 | 0.4873 (4) | 0.88441 (14) | 0.5246 (2) | 0.0341 (5) | |
| H4 | 0.5129 | 0.8899 | 0.4282 | 0.041* | |
| C5 | 0.6281 (4) | 0.91379 (14) | 0.6259 (3) | 0.0350 (5) | |
| H5 | 0.7506 | 0.9407 | 0.6000 | 0.042* | |
| C6 | 0.5899 (3) | 0.90390 (14) | 0.7655 (2) | 0.0311 (5) | |
| H6 | 0.6876 | 0.9238 | 0.8355 | 0.037* | |
| C7 | 0.0906 (3) | 0.80090 (14) | 0.7509 (2) | 0.0286 (5) | |
| P1 | 0.42105 (8) | 0.58120 (3) | 0.73007 (5) | 0.0260 (2) | |
| F1 | 0.3952 (3) | 0.66725 (10) | 0.81616 (18) | 0.0499 (4) | |
| F2 | 0.6643 (2) | 0.59231 (10) | 0.74158 (17) | 0.0427 (4) | |
| F3 | 0.4065 (2) | 0.63247 (11) | 0.58661 (16) | 0.0499 (4) | |
| F4 | 0.4482 (3) | 0.49411 (10) | 0.64785 (17) | 0.0506 (4) | |
| F5 | 0.4308 (2) | 0.52981 (10) | 0.87364 (15) | 0.0471 (4) | |
| F6 | 0.1770 (2) | 0.56909 (11) | 0.71904 (16) | 0.0443 (4) |
| N1 | 0.0252 (9) | 0.0227 (9) | 0.0271 (9) | 0.0018 (7) | 0.0011 (7) | −0.0016 (6) |
| N2 | 0.0349 (12) | 0.0336 (11) | 0.0478 (12) | −0.0043 (8) | 0.0029 (9) | 0.0027 (9) |
| C1 | 0.0381 (13) | 0.0414 (13) | 0.0248 (11) | 0.0031 (10) | −0.0003 (9) | −0.0011 (9) |
| C2 | 0.0264 (11) | 0.0195 (9) | 0.0307 (10) | 0.0033 (8) | −0.0006 (8) | 0.0001 (8) |
| C3 | 0.0362 (12) | 0.0249 (11) | 0.0310 (11) | 0.0002 (9) | −0.0023 (9) | 0.0001 (8) |
| C4 | 0.0433 (14) | 0.0273 (11) | 0.0324 (12) | 0.0021 (9) | 0.0082 (10) | 0.0018 (9) |
| C5 | 0.0323 (12) | 0.0281 (11) | 0.0453 (14) | −0.0012 (9) | 0.0093 (10) | 0.0001 (9) |
| C6 | 0.0273 (11) | 0.0267 (11) | 0.0391 (13) | −0.0001 (8) | 0.0003 (9) | −0.0040 (9) |
| C7 | 0.0301 (12) | 0.0250 (11) | 0.0301 (10) | 0.0003 (8) | −0.0033 (8) | 0.0009 (8) |
| P1 | 0.0283 (3) | 0.0249 (3) | 0.0248 (3) | 0.00132 (19) | 0.0022 (2) | 0.00086 (19) |
| F1 | 0.0546 (10) | 0.0339 (8) | 0.0603 (10) | 0.0116 (7) | −0.0027 (7) | −0.0167 (7) |
| F2 | 0.0283 (8) | 0.0477 (9) | 0.0520 (9) | 0.0000 (6) | 0.0022 (6) | 0.0001 (7) |
| F3 | 0.0482 (9) | 0.0618 (10) | 0.0400 (9) | 0.0034 (7) | 0.0036 (7) | 0.0229 (7) |
| F4 | 0.0600 (10) | 0.0387 (8) | 0.0539 (9) | −0.0024 (7) | 0.0104 (8) | −0.0192 (7) |
| F5 | 0.0528 (10) | 0.0545 (9) | 0.0347 (8) | 0.0112 (7) | 0.0074 (6) | 0.0171 (7) |
| F6 | 0.0287 (8) | 0.0613 (10) | 0.0428 (8) | −0.0047 (6) | 0.0017 (6) | 0.0025 (7) |
| N1—C6 | 1.338 (3) | C4—C5 | 1.375 (4) |
| N1—C2 | 1.361 (3) | C4—H4 | 0.9500 |
| N1—C1 | 1.482 (3) | C5—C6 | 1.380 (3) |
| N2—C7 | 1.141 (3) | C5—H5 | 0.9500 |
| C1—H1A | 0.9800 | C6—H6 | 0.9500 |
| C1—H1B | 0.9800 | P1—F3 | 1.5881 (14) |
| C1—H1C | 0.9800 | P1—F5 | 1.5899 (14) |
| C2—C3 | 1.371 (3) | P1—F4 | 1.5931 (15) |
| C2—C7 | 1.442 (3) | P1—F2 | 1.5953 (15) |
| C3—C4 | 1.386 (3) | P1—F1 | 1.5967 (15) |
| C3—H3 | 0.9500 | P1—F6 | 1.6020 (15) |
| C6—N1—C2 | 119.82 (19) | C6—C5—H5 | 120.3 |
| C6—N1—C1 | 120.14 (19) | N1—C6—C5 | 121.1 (2) |
| C2—N1—C1 | 120.04 (18) | N1—C6—H6 | 119.4 |
| N1—C1—H1A | 109.5 | C5—C6—H6 | 119.4 |
| N1—C1—H1B | 109.5 | N2—C7—C2 | 177.1 (2) |
| H1A—C1—H1B | 109.5 | F3—P1—F5 | 178.89 (9) |
| N1—C1—H1C | 109.5 | F3—P1—F4 | 90.74 (9) |
| H1A—C1—H1C | 109.5 | F5—P1—F4 | 89.38 (9) |
| H1B—C1—H1C | 109.5 | F3—P1—F2 | 90.76 (9) |
| N1—C2—C3 | 121.1 (2) | F5—P1—F2 | 90.35 (8) |
| N1—C2—C7 | 117.79 (19) | F4—P1—F2 | 89.37 (9) |
| C3—C2—C7 | 121.1 (2) | F3—P1—F1 | 90.70 (9) |
| C2—C3—C4 | 119.0 (2) | F5—P1—F1 | 89.19 (9) |
| C2—C3—H3 | 120.5 | F4—P1—F1 | 178.54 (10) |
| C4—C3—H3 | 120.5 | F2—P1—F1 | 90.37 (9) |
| C5—C4—C3 | 119.4 (2) | F3—P1—F6 | 89.67 (8) |
| C5—C4—H4 | 120.3 | F5—P1—F6 | 89.23 (9) |
| C3—C4—H4 | 120.3 | F4—P1—F6 | 90.24 (9) |
| C4—C5—C6 | 119.5 (2) | F2—P1—F6 | 179.43 (9) |
| C4—C5—H5 | 120.3 | F1—P1—F6 | 90.00 (9) |
| C6—N1—C2—C3 | 1.3 (3) | C2—C3—C4—C5 | −0.5 (3) |
| C1—N1—C2—C3 | −179.1 (2) | C3—C4—C5—C6 | 1.1 (3) |
| C6—N1—C2—C7 | −178.81 (19) | C2—N1—C6—C5 | −0.7 (3) |
| C1—N1—C2—C7 | 0.8 (3) | C1—N1—C6—C5 | 179.7 (2) |
| N1—C2—C3—C4 | −0.7 (3) | C4—C5—C6—N1 | −0.5 (3) |
| C7—C2—C3—C4 | 179.4 (2) |
| H··· | ||||
| C1—H1 | 0.98 | 2.40 | 3.161 (3) | 134 |
| C1—H1 | 0.98 | 2.40 | 3.307 (3) | 154 |
| C4—H4···F6iii | 0.95 | 2.41 | 3.319 (3) | 160 |
| C5—H5···F5iv | 0.95 | 2.51 | 3.409 (3) | 158 |
| C7H7N2+·PF6− | |
| Cu | |
| Orthorhombic, | Cell parameters from 9953 reflections |
| θ = 3.7–72.4° | |
| µ = 3.09 mm−1 | |
| Block, colourless | |
| 0.26 × 0.19 × 0.15 mm | |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 2009 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 1970 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 72.3°, θmin = 5.5° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15204 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.35 e Å−3 | |
| 2009 reflections | Δρmin = −0.36 e Å−3 |
| 160 parameters | Extinction correction: |
| 8 restraints | Extinction coefficient: 0.0095 (11) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack |
| Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.040 (6) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms were placed in calculated positions (C—H = 0.95 - 0.98 Å) and included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached carbon atoms. The anion is rotationally disordered over two resolved sites about the F1···F4 axis in a 85/15 ratio. The disorder was refined with restraints that the two components have the same geometry. |
| Occ. (<1) | |||||
| N1 | 0.9719 (3) | 0.3953 (2) | 0.6993 (2) | 0.0309 (5) | |
| N2 | 0.5379 (5) | 0.3571 (3) | 0.4213 (3) | 0.0543 (8) | |
| C1 | 0.9963 (5) | 0.3420 (3) | 0.8133 (3) | 0.0446 (8) | |
| H1A | 1.0606 | 0.2652 | 0.8073 | 0.067* | |
| H1B | 0.8849 | 0.3254 | 0.8475 | 0.067* | |
| H1C | 1.0594 | 0.4001 | 0.8606 | 0.067* | |
| C2 | 0.8312 (4) | 0.3669 (3) | 0.6408 (3) | 0.0316 (7) | |
| H2 | 0.7464 | 0.3157 | 0.6733 | 0.038* | |
| C3 | 0.8100 (4) | 0.4122 (3) | 0.5329 (3) | 0.0318 (7) | |
| C4 | 0.9332 (4) | 0.4882 (3) | 0.4868 (3) | 0.0376 (7) | |
| H4 | 0.9196 | 0.5206 | 0.4131 | 0.045* | |
| C5 | 1.0763 (5) | 0.5159 (4) | 0.5499 (3) | 0.0429 (8) | |
| H5 | 1.1621 | 0.5680 | 0.5198 | 0.051* | |
| C6 | 1.0937 (4) | 0.4676 (3) | 0.6563 (3) | 0.0370 (7) | |
| H6 | 1.1924 | 0.4856 | 0.6995 | 0.044* | |
| C7 | 0.6579 (5) | 0.3806 (3) | 0.4718 (3) | 0.0396 (8) | |
| P1 | 0.53561 (10) | 0.67446 (7) | 0.67835 (6) | 0.0304 (2) | |
| F1 | 0.6869 (4) | 0.6015 (3) | 0.7338 (2) | 0.0688 (8) | |
| F4 | 0.3803 (3) | 0.7456 (3) | 0.6233 (3) | 0.0786 (9) | |
| F2 | 0.6590 (4) | 0.7059 (3) | 0.5769 (2) | 0.0553 (8) | 0.848 (3) |
| F3 | 0.4755 (4) | 0.5537 (3) | 0.6115 (3) | 0.0647 (9) | 0.848 (3) |
| F5 | 0.5888 (5) | 0.7938 (3) | 0.7430 (4) | 0.0835 (14) | 0.848 (3) |
| F6 | 0.4049 (4) | 0.6385 (2) | 0.7769 (2) | 0.0522 (8) | 0.848 (3) |
| F2A | 0.599 (2) | 0.664 (2) | 0.5531 (6) | 0.0553 (8) | 0.152 (3) |
| F3A | 0.481 (2) | 0.5344 (7) | 0.6895 (17) | 0.0647 (9) | 0.152 (3) |
| F5A | 0.606 (2) | 0.8092 (8) | 0.679 (2) | 0.0835 (14) | 0.152 (3) |
| F6A | 0.4950 (19) | 0.6976 (14) | 0.8095 (6) | 0.0522 (8) | 0.152 (3) |
| N1 | 0.0269 (11) | 0.0281 (12) | 0.0378 (13) | 0.0013 (11) | 0.0057 (11) | 0.0006 (10) |
| N2 | 0.0478 (18) | 0.0555 (19) | 0.0597 (19) | −0.0142 (16) | −0.0071 (18) | −0.0133 (16) |
| C1 | 0.0425 (19) | 0.0486 (19) | 0.0428 (17) | −0.0023 (15) | −0.0016 (15) | 0.0112 (15) |
| C2 | 0.0278 (15) | 0.0254 (13) | 0.0416 (16) | −0.0037 (12) | 0.0070 (12) | −0.0030 (11) |
| C3 | 0.0314 (15) | 0.0234 (13) | 0.0406 (16) | −0.0029 (12) | 0.0030 (13) | −0.0071 (12) |
| C4 | 0.0423 (19) | 0.0321 (15) | 0.0385 (16) | −0.0098 (14) | 0.0023 (14) | −0.0003 (13) |
| C5 | 0.0374 (18) | 0.0435 (19) | 0.0477 (19) | −0.0147 (15) | 0.0036 (15) | 0.0047 (15) |
| C6 | 0.0286 (15) | 0.0370 (17) | 0.0453 (18) | −0.0060 (13) | 0.0026 (13) | 0.0000 (14) |
| C7 | 0.0397 (17) | 0.0359 (16) | 0.0431 (17) | −0.0079 (14) | −0.0002 (15) | −0.0096 (15) |
| P1 | 0.0261 (4) | 0.0322 (4) | 0.0331 (4) | 0.0031 (3) | 0.0033 (3) | 0.0003 (3) |
| F1 | 0.0616 (15) | 0.095 (2) | 0.0500 (13) | 0.0445 (15) | −0.0073 (12) | 0.0000 (13) |
| F4 | 0.0455 (14) | 0.090 (2) | 0.100 (2) | 0.0266 (14) | −0.0090 (14) | 0.0258 (19) |
| F2 | 0.0416 (16) | 0.078 (2) | 0.0465 (14) | −0.0058 (14) | 0.0129 (13) | 0.0148 (14) |
| F3 | 0.0441 (13) | 0.0667 (17) | 0.083 (2) | −0.0172 (14) | 0.0128 (17) | −0.0386 (17) |
| F5 | 0.0592 (17) | 0.0662 (19) | 0.125 (4) | −0.0103 (14) | 0.011 (2) | −0.064 (2) |
| F6 | 0.0469 (15) | 0.0530 (16) | 0.0567 (15) | 0.0087 (11) | 0.0262 (13) | 0.0062 (12) |
| F2A | 0.0416 (16) | 0.078 (2) | 0.0465 (14) | −0.0058 (14) | 0.0129 (13) | 0.0148 (14) |
| F3A | 0.0441 (13) | 0.0667 (17) | 0.083 (2) | −0.0172 (14) | 0.0128 (17) | −0.0386 (17) |
| F5A | 0.0592 (17) | 0.0662 (19) | 0.125 (4) | −0.0103 (14) | 0.011 (2) | −0.064 (2) |
| F6A | 0.0469 (15) | 0.0530 (16) | 0.0567 (15) | 0.0087 (11) | 0.0262 (13) | 0.0062 (12) |
| N1—C6 | 1.340 (4) | C5—C6 | 1.375 (5) |
| N1—C2 | 1.341 (4) | C5—H5 | 0.9500 |
| N1—C1 | 1.485 (4) | C6—H6 | 0.9500 |
| N2—C7 | 1.145 (5) | P1—F5 | 1.567 (3) |
| C1—H1A | 0.9800 | P1—F5A | 1.569 (6) |
| C1—H1B | 0.9800 | P1—F2A | 1.572 (6) |
| C1—H1C | 0.9800 | P1—F1 | 1.573 (2) |
| C2—C3 | 1.382 (5) | P1—F2 | 1.582 (2) |
| C2—H2 | 0.9500 | P1—F4 | 1.586 (3) |
| C3—C4 | 1.385 (4) | P1—F3A | 1.590 (6) |
| C3—C7 | 1.438 (5) | P1—F6 | 1.604 (2) |
| C4—C5 | 1.383 (5) | P1—F3 | 1.607 (3) |
| C4—H4 | 0.9500 | P1—F6A | 1.608 (6) |
| C6—N1—C2 | 121.7 (3) | F5A—P1—F1 | 101.8 (8) |
| C6—N1—C1 | 119.1 (3) | F2A—P1—F1 | 96.9 (7) |
| C2—N1—C1 | 119.2 (3) | F5—P1—F2 | 91.7 (2) |
| N1—C1—H1A | 109.5 | F1—P1—F2 | 88.03 (15) |
| N1—C1—H1B | 109.5 | F5—P1—F4 | 90.1 (2) |
| H1A—C1—H1B | 109.5 | F5A—P1—F4 | 79.4 (8) |
| N1—C1—H1C | 109.5 | F2A—P1—F4 | 83.6 (7) |
| H1A—C1—H1C | 109.5 | F1—P1—F4 | 178.71 (18) |
| H1B—C1—H1C | 109.5 | F2—P1—F4 | 92.93 (16) |
| N1—C2—C3 | 119.8 (3) | F5A—P1—F3A | 172.8 (10) |
| N1—C2—H2 | 120.1 | F2A—P1—F3A | 95.4 (10) |
| C3—C2—H2 | 120.1 | F1—P1—F3A | 71.5 (7) |
| C2—C3—C4 | 119.7 (3) | F4—P1—F3A | 107.3 (7) |
| C2—C3—C7 | 118.8 (3) | F5—P1—F6 | 90.9 (2) |
| C4—C3—C7 | 121.6 (3) | F1—P1—F6 | 93.12 (15) |
| C5—C4—C3 | 119.0 (3) | F2—P1—F6 | 177.11 (18) |
| C5—C4—H4 | 120.5 | F4—P1—F6 | 85.88 (16) |
| C3—C4—H4 | 120.5 | F5—P1—F3 | 178.3 (2) |
| C6—C5—C4 | 119.5 (3) | F1—P1—F3 | 90.83 (19) |
| C6—C5—H5 | 120.2 | F2—P1—F3 | 88.94 (18) |
| C4—C5—H5 | 120.2 | F4—P1—F3 | 88.3 (2) |
| N1—C6—C5 | 120.3 (3) | F6—P1—F3 | 88.39 (17) |
| N1—C6—H6 | 119.8 | F5A—P1—F6A | 85.2 (11) |
| C5—C6—H6 | 119.8 | F2A—P1—F6A | 171.6 (9) |
| N2—C7—C3 | 178.5 (4) | F1—P1—F6A | 79.9 (5) |
| F5A—P1—F2A | 87.9 (12) | F4—P1—F6A | 99.8 (5) |
| F5—P1—F1 | 90.8 (2) | F3A—P1—F6A | 91.0 (9) |
| C6—N1—C2—C3 | 0.3 (4) | C7—C3—C4—C5 | 179.6 (3) |
| C1—N1—C2—C3 | −177.6 (3) | C3—C4—C5—C6 | 0.2 (5) |
| N1—C2—C3—C4 | −0.9 (4) | C2—N1—C6—C5 | 0.5 (5) |
| N1—C2—C3—C7 | −179.9 (3) | C1—N1—C6—C5 | 178.5 (3) |
| C2—C3—C4—C5 | 0.7 (5) | C4—C5—C6—N1 | −0.8 (6) |
| H··· | ||||
| C1—H1 | 0.98 | 2.28 | 3.225 (5) | 161 |
| C2—H2···F6i | 0.95 | 2.34 | 3.253 (4) | 160 |
| C6—H6···F6ii | 0.95 | 2.53 | 3.389 (5) | 150 |
| C7H7N2+·PF6− | |
| Mo | |
| Orthorhombic, | Cell parameters from 9502 reflections |
| θ = 2.8–29.1° | |
| µ = 0.34 mm−1 | |
| Block, colourless | |
| 0.26 × 0.19 × 0.13 mm | |
| Bruker SMART APEX CCD diffractometer | 2642 independent reflections |
| Radiation source: fine-focus sealed tube | 2420 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.3333 pixels mm-1 | θmax = 29.2°, θmin = 2.8° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 19081 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.006 | |
| 2642 reflections | Δρmax = 0.31 e Å−3 |
| 146 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Absolute structure: Flack |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (3) |
| Experimental. The diffraction data were obtained from 3 sets of 400 frames, each of width 0.5° in ω, colllected at φ = 0.00, 90.00 and 180.00° and 2 sets of 800 frames, each of width 0.45° in φ, collected at ω = –30.00 and 210.00°. The scan time was 15 sec/frame. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.98 Å). All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. |
| N1 | 0.3277 (2) | 0.58167 (17) | 0.44131 (12) | 0.0197 (3) | |
| N2 | 0.5725 (2) | 0.0199 (2) | 0.39214 (14) | 0.0317 (4) | |
| C1 | 0.2618 (3) | 0.7396 (2) | 0.45537 (17) | 0.0280 (5) | |
| H1A | 0.3475 | 0.8152 | 0.4583 | 0.042* | |
| H1B | 0.2020 | 0.7431 | 0.5179 | 0.042* | |
| H1C | 0.1925 | 0.7647 | 0.3991 | 0.042* | |
| C2 | 0.4065 (2) | 0.5148 (3) | 0.51769 (14) | 0.0226 (4) | |
| H2 | 0.4191 | 0.5693 | 0.5790 | 0.027* | |
| C3 | 0.4688 (2) | 0.3685 (2) | 0.50746 (15) | 0.0231 (4) | |
| H3 | 0.5244 | 0.3211 | 0.5609 | 0.028* | |
| C4 | 0.4481 (2) | 0.2915 (2) | 0.41667 (15) | 0.0204 (4) | |
| C5 | 0.3665 (2) | 0.3617 (2) | 0.33903 (15) | 0.0230 (4) | |
| H5 | 0.3519 | 0.3096 | 0.2771 | 0.028* | |
| C6 | 0.3075 (2) | 0.5081 (2) | 0.35368 (14) | 0.0222 (4) | |
| H6 | 0.2517 | 0.5579 | 0.3012 | 0.027* | |
| C7 | 0.5161 (3) | 0.1389 (2) | 0.40273 (16) | 0.0246 (4) | |
| P1 | 0.32732 (6) | 0.01238 (6) | 0.69107 (4) | 0.02273 (14) | |
| F1 | 0.22985 (17) | 0.16304 (16) | 0.72363 (11) | 0.0386 (4) | |
| F2 | 0.48612 (19) | 0.1071 (2) | 0.70429 (16) | 0.0594 (5) | |
| F3 | 0.3350 (2) | −0.04134 (17) | 0.80554 (10) | 0.0471 (4) | |
| F4 | 0.42360 (18) | −0.13840 (19) | 0.65850 (12) | 0.0446 (4) | |
| F5 | 0.16725 (16) | −0.08286 (15) | 0.67718 (10) | 0.0326 (3) | |
| F6 | 0.31409 (19) | 0.06562 (16) | 0.57645 (10) | 0.0403 (4) |
| N1 | 0.0209 (7) | 0.0168 (7) | 0.0213 (8) | −0.0018 (7) | 0.0018 (6) | 0.0005 (6) |
| N2 | 0.0355 (10) | 0.0287 (9) | 0.0310 (10) | 0.0060 (8) | −0.0003 (8) | 0.0012 (8) |
| C1 | 0.0374 (12) | 0.0178 (9) | 0.0289 (12) | 0.0031 (8) | 0.0009 (9) | −0.0037 (8) |
| C2 | 0.0259 (9) | 0.0248 (9) | 0.0171 (8) | −0.0056 (8) | −0.0023 (7) | −0.0018 (8) |
| C3 | 0.0238 (9) | 0.0243 (10) | 0.0213 (10) | −0.0036 (8) | −0.0035 (7) | 0.0035 (8) |
| C4 | 0.0186 (8) | 0.0195 (8) | 0.0229 (9) | −0.0027 (7) | 0.0013 (7) | 0.0010 (7) |
| C5 | 0.0280 (10) | 0.0218 (9) | 0.0192 (9) | −0.0021 (7) | −0.0015 (7) | −0.0023 (7) |
| C6 | 0.0255 (9) | 0.0215 (8) | 0.0195 (9) | −0.0004 (8) | −0.0031 (7) | 0.0018 (7) |
| C7 | 0.0257 (10) | 0.0261 (10) | 0.0220 (10) | 0.0001 (8) | −0.0008 (8) | 0.0017 (8) |
| P1 | 0.0237 (2) | 0.0204 (2) | 0.0241 (3) | 0.00204 (19) | −0.00338 (19) | −0.00227 (19) |
| F1 | 0.0487 (8) | 0.0299 (7) | 0.0372 (8) | 0.0158 (6) | −0.0114 (7) | −0.0105 (6) |
| F2 | 0.0318 (7) | 0.0491 (9) | 0.0972 (15) | −0.0113 (7) | −0.0132 (10) | −0.0124 (10) |
| F3 | 0.0709 (10) | 0.0456 (8) | 0.0246 (7) | 0.0168 (8) | −0.0175 (7) | 0.0008 (6) |
| F4 | 0.0438 (8) | 0.0377 (8) | 0.0524 (10) | 0.0207 (7) | −0.0057 (7) | −0.0131 (7) |
| F5 | 0.0298 (6) | 0.0325 (6) | 0.0357 (7) | −0.0074 (6) | −0.0027 (6) | 0.0051 (6) |
| F6 | 0.0550 (10) | 0.0379 (7) | 0.0281 (7) | −0.0040 (7) | 0.0091 (7) | 0.0076 (6) |
| N1—C6 | 1.343 (2) | C4—C5 | 1.388 (3) |
| N1—C2 | 1.351 (2) | C4—C7 | 1.451 (3) |
| N1—C1 | 1.486 (2) | C5—C6 | 1.374 (3) |
| N2—C7 | 1.142 (3) | C5—H5 | 0.9500 |
| C1—H1A | 0.9800 | C6—H6 | 0.9500 |
| C1—H1B | 0.9800 | P1—F2 | 1.5918 (16) |
| C1—H1C | 0.9800 | P1—F4 | 1.5985 (14) |
| C2—C3 | 1.376 (3) | P1—F3 | 1.5992 (15) |
| C2—H2 | 0.9500 | P1—F6 | 1.6026 (15) |
| C3—C4 | 1.394 (3) | P1—F1 | 1.6030 (14) |
| C3—H3 | 0.9500 | P1—F5 | 1.6042 (14) |
| C6—N1—C2 | 121.37 (17) | C4—C5—H5 | 120.7 |
| C6—N1—C1 | 119.67 (17) | N1—C6—C5 | 120.78 (18) |
| C2—N1—C1 | 118.95 (17) | N1—C6—H6 | 119.6 |
| N1—C1—H1A | 109.5 | C5—C6—H6 | 119.6 |
| N1—C1—H1B | 109.5 | N2—C7—C4 | 178.6 (2) |
| H1A—C1—H1B | 109.5 | F2—P1—F4 | 90.63 (9) |
| N1—C1—H1C | 109.5 | F2—P1—F3 | 90.45 (10) |
| H1A—C1—H1C | 109.5 | F4—P1—F3 | 90.20 (8) |
| H1B—C1—H1C | 109.5 | F2—P1—F6 | 91.08 (10) |
| N1—C2—C3 | 120.56 (19) | F4—P1—F6 | 90.54 (9) |
| N1—C2—H2 | 119.7 | F3—P1—F6 | 178.30 (10) |
| C3—C2—H2 | 119.7 | F2—P1—F1 | 89.70 (9) |
| C2—C3—C4 | 118.32 (19) | F4—P1—F1 | 179.67 (9) |
| C2—C3—H3 | 120.8 | F3—P1—F1 | 89.81 (9) |
| C4—C3—H3 | 120.8 | F6—P1—F1 | 89.45 (8) |
| C5—C4—C3 | 120.40 (19) | F2—P1—F5 | 179.72 (10) |
| C5—C4—C7 | 120.02 (19) | F4—P1—F5 | 89.37 (9) |
| C3—C4—C7 | 119.56 (19) | F3—P1—F5 | 89.83 (8) |
| C6—C5—C4 | 118.57 (19) | F6—P1—F5 | 88.64 (8) |
| C6—C5—H5 | 120.7 | F1—P1—F5 | 90.30 (8) |
| C6—N1—C2—C3 | 0.1 (3) | C3—C4—C5—C6 | 0.2 (3) |
| C1—N1—C2—C3 | 179.82 (18) | C7—C4—C5—C6 | −178.13 (17) |
| N1—C2—C3—C4 | −0.1 (3) | C2—N1—C6—C5 | 0.1 (3) |
| C2—C3—C4—C5 | 0.0 (3) | C1—N1—C6—C5 | −179.63 (18) |
| C2—C3—C4—C7 | 178.32 (18) | C4—C5—C6—N1 | −0.2 (3) |
| H··· | ||||
| C5—H5···F5i | 0.95 | 2.37 | 3.247 (2) | 153 |
| C3—H3···F3ii | 0.95 | 2.46 | 3.106 (2) | 126 |
| C1—H1 | 0.98 | 2.51 | 3.208 (3) | 128 |