Literature DB >> 25161550

4-Cyano-1-methyl-pyridinium perchlor-ate.

Vu D Nguyen1, Cameron A McCormick2, Lynn V Koplitz1, Joel T Mague3.   

Abstract

The title salt, C7H7N2 (+)·ClO4 (-), crystallizes with alternating cations and anions in wavy sheets, which are formed by a number of C-H⋯O and C-H⋯N hydrogen bonds, lying approximately parallel to (001).

Entities:  

Year:  2014        PMID: 25161550      PMCID: PMC4120629          DOI: 10.1107/S1600536814012860

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of other 4-cyano-1-methyl­pyridinium salts, see: McCormick et al. (2013 ▶); Kammer et al. (2012a ▶,b ▶); Hardacre et al. (2008 ▶, 2010 ▶); Glavcheva et al. (2004 ▶); Bockman & Kochi (1989 ▶, 1992 ▶). For the structure of 3-cyano-1-methyl­pyridinium perchlorate, see: McCormick et al. (2014 ▶) and for the structure of 4-cyano­anilinium perchlorate, see: Dai (2008 ▶). For a discussion of anion–π interactions, see: Frontera et al. (2011 ▶).

Experimental

Crystal data

C7H7N2 +·ClO4 M = 218.60 Orthorhombic, a = 10.232 (2) Å b = 10.872 (3) Å c = 16.769 (4) Å V = 1865.3 (7) Å3 Z = 8 Mo Kα radiation μ = 0.40 mm−1 T = 100 K 0.23 × 0.16 × 0.12 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2010 ▶) T min = 0.86, T max = 0.95 30647 measured reflections 2475 independent reflections 2235 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.097 S = 1.07 2475 reflections 129 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2012 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶)’). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814012860/su2740sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012860/su2740Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814012860/su2740Isup3.cml CCDC reference: 1006394 Additional supporting information: crystallographic information; 3D view; checkCIF report
C7H7N2+·ClO4F(000) = 896
Mr = 218.60Dx = 1.557 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 9543 reflections
a = 10.232 (2) Åθ = 3.0–29.1°
b = 10.872 (3) ŵ = 0.40 mm1
c = 16.769 (4) ÅT = 100 K
V = 1865.3 (7) Å3Block, colourless
Z = 80.23 × 0.16 × 0.12 mm
Bruker SMART APEX CCD diffractometer2475 independent reflections
Radiation source: fine-focus sealed tube2235 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
φ and ω scansθmax = 29.1°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2010)h = −13→14
Tmin = 0.86, Tmax = 0.95k = −14→14
30647 measured reflectionsl = −22→22
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0474P)2 + 1.204P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2475 reflectionsΔρmax = 0.38 e Å3
129 parametersΔρmin = −0.39 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0061 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms were placed in calculated positions (C—H = 0.95 - 0.98 Å) and included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached carbon atoms.
xyzUiso*/Ueq
N10.07438 (11)0.87020 (10)0.65230 (6)0.0173 (2)
N2−0.23590 (12)0.56153 (11)0.49548 (7)0.0259 (3)
C10.15878 (14)0.95747 (13)0.69622 (9)0.0238 (3)
H1A0.23070.91250.72150.036*
H1B0.10710.99940.73720.036*
H1C0.19441.01830.65900.036*
C2−0.04511 (13)0.90672 (12)0.62884 (8)0.0201 (3)
H2−0.07300.98840.63940.024*
C3−0.12714 (13)0.82710 (12)0.58970 (8)0.0198 (3)
H3−0.21150.85300.57310.024*
C4−0.08458 (13)0.70782 (12)0.57475 (7)0.0175 (3)
C50.03964 (13)0.67124 (12)0.59898 (8)0.0204 (3)
H50.07000.59020.58870.024*
C60.11766 (14)0.75535 (13)0.63820 (8)0.0200 (3)
H60.20260.73200.65540.024*
C7−0.16859 (13)0.62451 (12)0.53131 (8)0.0201 (3)
Cl10.01260 (3)0.73669 (3)0.35515 (2)0.01939 (12)
O10.12396 (10)0.79937 (10)0.32127 (6)0.0253 (2)
O2−0.05193 (12)0.81513 (10)0.41181 (6)0.0285 (3)
O30.05528 (12)0.62622 (10)0.39448 (9)0.0386 (3)
O4−0.07787 (11)0.70787 (15)0.29216 (7)0.0432 (4)
U11U22U33U12U13U23
N10.0169 (5)0.0170 (5)0.0180 (5)−0.0015 (4)0.0016 (4)0.0016 (4)
N20.0280 (6)0.0231 (6)0.0265 (6)−0.0034 (5)−0.0028 (5)0.0021 (5)
C10.0233 (6)0.0201 (6)0.0278 (7)−0.0042 (5)−0.0028 (5)−0.0017 (5)
C20.0206 (6)0.0157 (6)0.0241 (6)0.0022 (5)0.0010 (5)0.0026 (5)
C30.0177 (6)0.0184 (6)0.0232 (6)0.0023 (5)−0.0001 (5)0.0039 (5)
C40.0187 (6)0.0182 (6)0.0155 (5)−0.0011 (5)0.0017 (4)0.0020 (4)
C50.0200 (6)0.0183 (6)0.0229 (6)0.0040 (5)0.0013 (5)−0.0013 (5)
C60.0160 (6)0.0210 (6)0.0229 (6)0.0030 (5)0.0007 (5)0.0007 (5)
C70.0208 (6)0.0184 (6)0.0211 (6)0.0010 (5)0.0005 (5)0.0041 (5)
Cl10.01679 (17)0.01989 (18)0.02150 (19)0.00045 (11)0.00104 (11)−0.00297 (11)
O10.0221 (5)0.0261 (5)0.0277 (5)−0.0036 (4)0.0033 (4)0.0018 (4)
O20.0401 (6)0.0236 (5)0.0217 (5)0.0050 (4)0.0099 (4)−0.0012 (4)
O30.0292 (6)0.0213 (5)0.0654 (9)0.0055 (4)0.0110 (6)0.0133 (5)
O40.0193 (5)0.0806 (10)0.0297 (6)−0.0081 (6)−0.0003 (5)−0.0213 (6)
N1—C21.3443 (18)C3—H30.9500
N1—C61.3458 (17)C4—C51.3924 (19)
N1—C11.4793 (17)C4—C71.4456 (18)
N2—C71.1420 (18)C5—C61.3806 (19)
C1—H1A0.9800C5—H50.9500
C1—H1B0.9800C6—H60.9500
C1—H1C0.9800Cl1—O21.4373 (10)
C2—C31.3728 (19)Cl1—O31.4382 (12)
C2—H20.9500Cl1—O41.4389 (12)
C3—C41.3907 (18)Cl1—O11.4441 (10)
C2—N1—C6121.46 (12)C3—C4—C7119.27 (12)
C2—N1—C1119.16 (11)C5—C4—C7120.72 (12)
C6—N1—C1119.36 (11)C6—C5—C4118.54 (12)
N1—C1—H1A109.5C6—C5—H5120.7
N1—C1—H1B109.5C4—C5—H5120.7
H1A—C1—H1B109.5N1—C6—C5120.52 (12)
N1—C1—H1C109.5N1—C6—H6119.7
H1A—C1—H1C109.5C5—C6—H6119.7
H1B—C1—H1C109.5N2—C7—C4177.94 (14)
N1—C2—C3120.65 (12)O2—Cl1—O3109.38 (7)
N1—C2—H2119.7O2—Cl1—O4108.60 (7)
C3—C2—H2119.7O3—Cl1—O4110.50 (9)
C2—C3—C4118.86 (12)O2—Cl1—O1110.03 (7)
C2—C3—H3120.6O3—Cl1—O1109.56 (7)
C4—C3—H3120.6O4—Cl1—O1108.76 (7)
C3—C4—C5119.97 (12)
C6—N1—C2—C30.2 (2)C3—C4—C5—C60.48 (19)
C1—N1—C2—C3−178.38 (12)C7—C4—C5—C6178.09 (12)
N1—C2—C3—C40.0 (2)C2—N1—C6—C5−0.1 (2)
C2—C3—C4—C5−0.4 (2)C1—N1—C6—C5178.49 (12)
C2—C3—C4—C7−178.02 (12)C4—C5—C6—N1−0.3 (2)
D—H···AD—HH···AD···AD—H···A
C1—H1A···O4i0.982.373.245 (2)149
C1—H1C···O2ii0.982.613.2540 (19)123
C2—H2···O1ii0.952.463.4001 (18)173
C2—H2···O2ii0.952.633.2549 (18)123
C3—H3···N2iii0.952.673.3098 (18)125
C3—H3···O3iv0.952.463.300 (2)148
C6—H6···O4i0.952.503.351 (2)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1A⋯O4i 0.982.373.245 (2)149
C1—H1C⋯O2ii 0.982.613.2540 (19)123
C2—H2⋯O1ii 0.952.463.4001 (18)173
C2—H2⋯O2ii 0.952.633.2549 (18)123
C3—H3⋯N2iii 0.952.673.3098 (18)125
C3—H3⋯O3iv 0.952.463.300 (2)148
C6—H6⋯O4i 0.952.503.351 (2)149

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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2.  Putting anion-π interactions into perspective.

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3.  Solid and liquid charge-transfer complex formation between 1-methylnaphthalene and 1-alkyl-cyanopyridinium bis{(trifluoromethyl)sulfonyl}imide ionic liquids.

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Journal:  Phys Chem Chem Phys       Date:  2010-01-18       Impact factor: 3.676

4.  4-Cyano-1-methyl-pyridinium nitrate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-31

5.  4-Cyano-anilinium perchlorate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27

6.  4-Cyano-1-methyl-pyridinium iodide.

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  8 in total
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1.  3-Cyano-N-methylpyridinium perchlorate.

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  2 in total

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