Literature DB >> 22902950

Dynamic time warping and machine learning for signal quality assessment of pulsatile signals.

Q Li1, G D Clifford.   

Abstract

In this work, we describe a beat-by-beat method for assessing the clinical utility of pulsatile waveforms, primarily recorded from cardiovascular blood volume or pressure changes, concentrating on the photoplethysmogram (PPG). Physiological blood flow is nonstationary, with pulses changing in height, width and morphology due to changes in heart rate, cardiac output, sensor type and hardware or software pre-processing requirements. Moreover, considerable inter-individual and sensor-location variability exists. Simple template matching methods are therefore inappropriate, and a patient-specific adaptive initialization is therefore required. We introduce dynamic time warping to stretch each beat to match a running template and combine it with several other features related to signal quality, including correlation and the percentage of the beat that appeared to be clipped. The features were then presented to a multi-layer perceptron neural network to learn the relationships between the parameters in the presence of good- and bad-quality pulses. An expert-labeled database of 1055 segments of PPG, each 6 s long, recorded from 104 separate critical care admissions during both normal and verified arrhythmic events, was used to train and test our algorithms. An accuracy of 97.5% on the training set and 95.2% on test set was found. The algorithm could be deployed as a stand-alone signal quality assessment algorithm for vetting the clinical utility of PPG traces or any similar quasi-periodic signal.

Entities:  

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Year:  2012        PMID: 22902950     DOI: 10.1088/0967-3334/33/9/1491

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.833


  36 in total

1.  Deep learning approaches for plethysmography signal quality assessment in the presence of atrial fibrillation.

Authors:  Tania Pereira; Cheng Ding; Kais Gadhoumi; Nate Tran; Rene A Colorado; Karl Meisel; Xiao Hu
Journal:  Physiol Meas       Date:  2019-12-27       Impact factor: 2.833

Review 2.  A review of signals used in sleep analysis.

Authors:  A Roebuck; V Monasterio; E Gederi; M Osipov; J Behar; A Malhotra; T Penzel; G D Clifford
Journal:  Physiol Meas       Date:  2013-12-17       Impact factor: 2.833

3.  A Unified Framework for Quality Indexing and Classification of Seismocardiogram Signals.

Authors:  Jonathan Zia; Jacob Kimball; Sinan Hersek; Md Mobashir Hasan Shandhi; Beren Semiz; Omer T Inan
Journal:  IEEE J Biomed Health Inform       Date:  2019-07-26       Impact factor: 5.772

4.  Optical blood pressure estimation with photoplethysmography and FFT-based neural networks.

Authors:  Xiaoman Xing; Mingshan Sun
Journal:  Biomed Opt Express       Date:  2016-07-12       Impact factor: 3.732

5.  False alarm reduction in critical care.

Authors:  Gari D Clifford; Ikaro Silva; Benjamin Moody; Qiao Li; Danesh Kella; Abdullah Chahin; Tristan Kooistra; Diane Perry; Roger G Mark
Journal:  Physiol Meas       Date:  2016-07-25       Impact factor: 2.833

6.  Robust detection of heart beats in multimodal data.

Authors:  Ikaro Silva; Benjamin Moody; Joachim Behar; Alistair Johnson; Julien Oster; Gari D Clifford; George B Moody
Journal:  Physiol Meas       Date:  2015-07-28       Impact factor: 2.833

7.  A Multivariate Timeseries Modeling Approach to Severity of Illness Assessment and Forecasting in ICU with Sparse, Heterogeneous Clinical Data.

Authors:  Marzyeh Ghassemi; Marco A F Pimentel; Tristan Naumann; Thomas Brennan; David A Clifton; Peter Szolovits; Mengling Feng
Journal:  Proc Conf AAAI Artif Intell       Date:  2015-01

8.  The PhysioNet/Computing in Cardiology Challenge 2015: Reducing False Arrhythmia Alarms in the ICU.

Authors:  Gari D Clifford; Ikaro Silva; Benjamin Moody; Qiao Li; Danesh Kella; Abdullah Shahin; Tristan Kooistra; Diane Perry; Roger G Mark
Journal:  Comput Cardiol (2010)       Date:  2015-09

9.  Transfer learning from ECG to PPG for improved sleep staging from wrist-worn wearables.

Authors:  Qiao Li; Qichen Li; Ayse S Cakmak; Giulia Da Poian; Donald L Bliwise; Viola Vaccarino; Amit J Shah; Gari D Clifford
Journal:  Physiol Meas       Date:  2021-05-13       Impact factor: 2.833

10.  Differential effects of the blood pressure state on pulse rate variability and heart rate variability in critically ill patients.

Authors:  Elisa Mejía-Mejía; James M May; Mohamed Elgendi; Panayiotis A Kyriacou
Journal:  NPJ Digit Med       Date:  2021-05-14
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