Literature DB >> 33761477

Transfer learning from ECG to PPG for improved sleep staging from wrist-worn wearables.

Qiao Li1, Qichen Li1, Ayse S Cakmak1,2, Giulia Da Poian1,3, Donald L Bliwise4, Viola Vaccarino5, Amit J Shah5, Gari D Clifford1,6.   

Abstract

Objective.To develop a sleep staging method from wrist-worn accelerometry and the photoplethysmogram (PPG) by leveraging transfer learning from a large electrocardiogram (ECG) database.Approach.In previous work, we developed a deep convolutional neural network for sleep staging from ECG using the cross-spectrogram of ECG-derived respiration and instantaneous beat intervals, heart rate variability metrics, spectral characteristics, and signal quality measures derived from 5793 subjects in Sleep Heart Health Study (SHHS). We updated the weights of this model by transfer learning using PPG data derived from the Empatica E4 wristwatch worn by 105 subjects in the 'Emory Twin Study Follow-up' (ETSF) database, for whom overnight polysomnographic (PSG) scoring was available. The relative performance of PPG, and actigraphy (Act), plus combinations of these two signals, with and without transfer learning was assessed.Main results.The performance of our model with transfer learning showed higher accuracy (1-9 percentage points) and Cohen's Kappa (0.01-0.13) than those without transfer learning for every classification category. Statistically significant, though relatively small, incremental differences in accuracy occurred for every classification category as tested with the McNemar test. The out-of-sample classification performance using features from PPG and actigraphy for four-class classification was Accuracy (Acc) = 68.62% and Kappa = 0.44. For two-class classification, the performance was Acc = 81.49% and Kappa = 0.58.Significance.We proposed a combined PPG and actigraphy-based sleep stage classification approach using transfer learning from a large ECG sleep database. Results demonstrate that the transfer learning approach improves estimates of sleep state. The use of automated beat detectors and quality metrics means human over-reading is not required, and the approach can be scaled for large cross-sectional or longitudinal studies using wrist-worn devices for sleep staging.
© 2021 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  electrocardiogram; photoplethysmogram; sleep stage classification; transfer learning; wrist-worn devices

Mesh:

Year:  2021        PMID: 33761477      PMCID: PMC8564719          DOI: 10.1088/1361-6579/abf1b0

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.833


  27 in total

1.  PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals.

Authors:  A L Goldberger; L A Amaral; L Glass; J M Hausdorff; P C Ivanov; R G Mark; J E Mietus; G B Moody; C K Peng; H E Stanley
Journal:  Circulation       Date:  2000-06-13       Impact factor: 29.690

2.  Automatic sleep/wake identification from wrist activity.

Authors:  R J Cole; D F Kripke; W Gruen; D J Mullaney; J C Gillin
Journal:  Sleep       Date:  1992-10       Impact factor: 5.849

3.  The addition of entropy-based regularity parameters improves sleep stage classification based on heart rate variability.

Authors:  M Aktaruzzaman; M Migliorini; M Tenhunen; S L Himanen; A M Bianchi; R Sassi
Journal:  Med Biol Eng Comput       Date:  2015-02-18       Impact factor: 2.602

Review 4.  How accurate is pulse rate variability as an estimate of heart rate variability? A review on studies comparing photoplethysmographic technology with an electrocardiogram.

Authors:  Axel Schäfer; Jan Vagedes
Journal:  Int J Cardiol       Date:  2012-07-17       Impact factor: 4.164

5.  An unbiased, efficient sleep-wake detection algorithm for a population with sleep disorders: change point decoder.

Authors:  Ayse S Cakmak; Giulia Da Poian; Adam Willats; Ammer Haffar; Rami Abdulbaki; Yi-An Ko; Amit J Shah; Viola Vaccarino; Donald L Bliwise; Christopher Rozell; Gari D Clifford
Journal:  Sleep       Date:  2020-08-12       Impact factor: 5.849

6.  Performance comparison between wrist and chest actigraphy in combination with heart rate variability for sleep classification.

Authors:  Md Aktaruzzaman; Massimo Walter Rivolta; Ruby Karmacharya; Nello Scarabottolo; Luigi Pugnetti; Massimo Garegnani; Gabriele Bovi; Giovanni Scalera; Maurizio Ferrarin; Roberto Sassi
Journal:  Comput Biol Med       Date:  2017-08-08       Impact factor: 4.589

7.  Estimation of sleep stages in a healthy adult population from optical plethysmography and accelerometer signals.

Authors:  Z Beattie; Y Oyang; A Statan; A Ghoreyshi; A Pantelopoulos; A Russell; C Heneghan
Journal:  Physiol Meas       Date:  2017-10-31       Impact factor: 2.833

8.  A validation study of Fitbit Charge 2™ compared with polysomnography in adults.

Authors:  Massimiliano de Zambotti; Aimee Goldstone; Stephanie Claudatos; Ian M Colrain; Fiona C Baker
Journal:  Chronobiol Int       Date:  2017-12-13       Impact factor: 2.877

9.  The Sleep of the Ring: Comparison of the ŌURA Sleep Tracker Against Polysomnography.

Authors:  Massimiliano de Zambotti; Leonardo Rosas; Ian M Colrain; Fiona C Baker
Journal:  Behav Sleep Med       Date:  2017-03-21       Impact factor: 2.964

10.  Sleep and waking activity of pontine gigantocellular field neurons.

Authors:  J M Siegel; D J McGinty; S M Breedlove
Journal:  Exp Neurol       Date:  1977-09       Impact factor: 5.620

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  2 in total

1.  Establishing best practices in photoplethysmography signal acquisition and processing.

Authors:  Peter H Charlton; Kristjan Pilt; Panicos A Kyriacou
Journal:  Physiol Meas       Date:  2022-05-25       Impact factor: 2.688

2.  Comparison of deep transfer learning algorithms and transferability measures for wearable sleep staging.

Authors:  Samuel H Waters; Gari D Clifford
Journal:  Biomed Eng Online       Date:  2022-09-12       Impact factor: 3.903

  2 in total

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