Literature DB >> 24772206

Quantitative tumor segmentation for evaluation of extent of glioblastoma resection to facilitate multisite clinical trials.

James S Cordova1, Eduard Schreibmann2, Costas G Hadjipanayis3, Ying Guo4, Hui-Kuo G Shu5, Hyunsuk Shim6, Chad A Holder7.   

Abstract

Standard-of-care therapy for glioblastomas, the most common and aggressive primary adult brain neoplasm, is maximal safe resection, followed by radiation and chemotherapy. Because maximizing resection may be beneficial for these patients, improving tumor extent of resection (EOR) with methods such as intraoperative 5-aminolevulinic acid fluorescence-guided surgery (FGS) is currently under evaluation. However, it is difficult to reproducibly judge EOR in these studies due to the lack of reliable tumor segmentation methods, especially for postoperative magnetic resonance imaging (MRI) scans. Therefore, a reliable, easily distributable segmentation method is needed to permit valid comparison, especially across multiple sites. We report a segmentation method that combines versatile region-of-interest blob generation with automated clustering methods. We applied this to glioblastoma cases undergoing FGS and matched controls to illustrate the method's reliability and accuracy. Agreement and interrater variability between segmentations were assessed using the concordance correlation coefficient, and spatial accuracy was determined using the Dice similarity index and mean Euclidean distance. Fuzzy C-means clustering with three classes was the best performing method, generating volumes with high agreement with manual contouring and high interrater agreement preoperatively and postoperatively. The proposed segmentation method allows tumor volume measurements of contrast-enhanced T 1-weighted images in the unbiased, reproducible fashion necessary for quantifying EOR in multicenter trials.

Entities:  

Year:  2014        PMID: 24772206      PMCID: PMC3998691          DOI: 10.1593/tlo.13835

Source DB:  PubMed          Journal:  Transl Oncol        ISSN: 1936-5233            Impact factor:   4.243


  49 in total

1.  Segmentation of thalamic nuclei using a modified k-means clustering algorithm and high-resolution quantitative magnetic resonance imaging at 1.5 T.

Authors:  Sean C L Deoni; Brian K Rutt; Andrew G Parrent; Terry M Peters
Journal:  Neuroimage       Date:  2006-10-25       Impact factor: 6.556

2.  Fluid vector flow and applications in brain tumor segmentation.

Authors:  Tao Wang; Irene Cheng; Anup Basu
Journal:  IEEE Trans Biomed Eng       Date:  2009-01-23       Impact factor: 4.538

3.  Automatic segmentation of brain MR images using an adaptive balloon snake model with fuzzy classification.

Authors:  Hung-Ting Liu; Tony W H Sheu; Herng-Hua Chang
Journal:  Med Biol Eng Comput       Date:  2013-06-07       Impact factor: 2.602

4.  In vitro and in vivo porphyrin accumulation by C6 glioma cells after exposure to 5-aminolevulinic acid.

Authors:  W Stummer; S Stocker; A Novotny; A Heimann; O Sauer; O Kempski; N Plesnila; J Wietzorrek; H J Reulen
Journal:  J Photochem Photobiol B       Date:  1998-09       Impact factor: 6.252

5.  Intraoperative detection of malignant gliomas by 5-aminolevulinic acid-induced porphyrin fluorescence.

Authors:  W Stummer; S Stocker; S Wagner; H Stepp; C Fritsch; C Goetz; A E Goetz; R Kiefmann; H J Reulen
Journal:  Neurosurgery       Date:  1998-03       Impact factor: 4.654

6.  A concordance correlation coefficient to evaluate reproducibility.

Authors:  L I Lin
Journal:  Biometrics       Date:  1989-03       Impact factor: 2.571

7.  Automatic magnetic resonance tissue characterization for three-dimensional magnetic resonance imaging of the brain.

Authors:  W E Phillips; S Phuphanich; R P Velthuizen; M L Silbiger
Journal:  J Neuroimaging       Date:  1995-07       Impact factor: 2.486

Review 8.  State of the art survey on MRI brain tumor segmentation.

Authors:  Nelly Gordillo; Eduard Montseny; Pilar Sobrevilla
Journal:  Magn Reson Imaging       Date:  2013-06-20       Impact factor: 2.546

9.  A brain tumor segmentation framework based on outlier detection.

Authors:  Marcel Prastawa; Elizabeth Bullitt; Sean Ho; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

10.  Effects of radiotherapy with concomitant and adjuvant temozolomide versus radiotherapy alone on survival in glioblastoma in a randomised phase III study: 5-year analysis of the EORTC-NCIC trial.

Authors:  Roger Stupp; Monika E Hegi; Warren P Mason; Martin J van den Bent; Martin J B Taphoorn; Robert C Janzer; Samuel K Ludwin; Anouk Allgeier; Barbara Fisher; Karl Belanger; Peter Hau; Alba A Brandes; Johanna Gijtenbeek; Christine Marosi; Charles J Vecht; Karima Mokhtari; Pieter Wesseling; Salvador Villa; Elizabeth Eisenhauer; Thierry Gorlia; Michael Weller; Denis Lacombe; J Gregory Cairncross; René-Olivier Mirimanoff
Journal:  Lancet Oncol       Date:  2009-03-09       Impact factor: 41.316

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  12 in total

1.  Algorithmic three-dimensional analysis of tumor shape in MRI improves prognosis of survival in glioblastoma: a multi-institutional study.

Authors:  Nicholas Czarnek; Kal Clark; Katherine B Peters; Maciej A Mazurowski
Journal:  J Neurooncol       Date:  2017-01-10       Impact factor: 4.130

2.  Whole-brain spectroscopic MRI biomarkers identify infiltrating margins in glioblastoma patients.

Authors:  James S Cordova; Hui-Kuo G Shu; Zhongxing Liang; Saumya S Gurbani; Lee A D Cooper; Chad A Holder; Jeffrey J Olson; Brad Kairdolf; Eduard Schreibmann; Stewart G Neill; Constantinos G Hadjipanayis; Hyunsuk Shim
Journal:  Neuro Oncol       Date:  2016-03-15       Impact factor: 12.300

3.  Semi-Automated Volumetric and Morphological Assessment of Glioblastoma Resection with Fluorescence-Guided Surgery.

Authors:  J Scott Cordova; Saumya S Gurbani; Chad A Holder; Jeffrey J Olson; Eduard Schreibmann; Ran Shi; Ying Guo; Hui-Kuo G Shu; Hyunsuk Shim; Costas G Hadjipanayis
Journal:  Mol Imaging Biol       Date:  2016-06       Impact factor: 3.488

4.  Rater Reliability of the Hardy Classification for Pituitary Adenomas in the Magnetic Resonance Imaging Era.

Authors:  Michael A Mooney; Douglas A Hardesty; John P Sheehy; C Roger Bird; Kristina Chapple; William L White; Andrew S Little
Journal:  J Neurol Surg B Skull Base       Date:  2017-06-07

5.  Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival.

Authors:  Pattana Wangaryattawanich; Masumeh Hatami; Jixin Wang; Ginu Thomas; Adam Flanders; Justin Kirby; Max Wintermark; Erich S Huang; Ali Shojaee Bakhtiari; Markus M Luedi; Syed S Hashmi; Daniel L Rubin; James Y Chen; Scott N Hwang; John Freymann; Chad A Holder; Pascal O Zinn; Rivka R Colen
Journal:  Neuro Oncol       Date:  2015-07-22       Impact factor: 12.300

6.  Lesion segmentation for MR spectroscopic imaging using the convolution difference method.

Authors:  Andrew A Maudsley
Journal:  Magn Reson Med       Date:  2018-10-10       Impact factor: 4.668

Review 7.  The Use of Quantitative Imaging in Radiation Oncology: A Quantitative Imaging Network (QIN) Perspective.

Authors:  Robert H Press; Hui-Kuo G Shu; Hyunsuk Shim; James M Mountz; Brenda F Kurland; Richard L Wahl; Ella F Jones; Nola M Hylton; Elizabeth R Gerstner; Robert J Nordstrom; Lori Henderson; Karen A Kurdziel; Bhadrasain Vikram; Michael A Jacobs; Matthias Holdhoff; Edward Taylor; David A Jaffray; Lawrence H Schwartz; David A Mankoff; Paul E Kinahan; Hannah M Linden; Philippe Lambin; Thomas J Dilling; Daniel L Rubin; Lubomir Hadjiiski; John M Buatti
Journal:  Int J Radiat Oncol Biol Phys       Date:  2018-06-30       Impact factor: 7.038

8.  Rank-Two NMF Clustering for Glioblastoma Characterization.

Authors:  Aymen Bougacha; Ines Njeh; Jihene Boughariou; Omar Kammoun; Kheireddine Ben Mahfoudh; Mariem Dammak; Chokri Mhiri; Ahmed Ben Hamida
Journal:  J Healthc Eng       Date:  2018-10-23       Impact factor: 2.682

9.  The Brain Imaging Collaboration Suite (BrICS): A Cloud Platform for Integrating Whole-Brain Spectroscopic MRI into the Radiation Therapy Planning Workflow.

Authors:  Saumya Gurbani; Brent Weinberg; Lee Cooper; Eric Mellon; Eduard Schreibmann; Sulaiman Sheriff; Andrew Maudsley; Mohammed Goryawala; Hui-Kuo Shu; Hyunsuk Shim
Journal:  Tomography       Date:  2019-03

10.  Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry.

Authors:  Raphael Meier; Urspeter Knecht; Tina Loosli; Stefan Bauer; Johannes Slotboom; Roland Wiest; Mauricio Reyes
Journal:  Sci Rep       Date:  2016-03-22       Impact factor: 4.379

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