Literature DB >> 22895177

The checkpoint transcriptional response: make sure to turn it off once you are satisfied.

Marcus B Smolka1, Francisco M Bastos de Oliveira, Michael R Harris, Robertus A M de Bruin.   

Abstract

The replication checkpoint signaling network monitors the presence of replication-induced lesions to DNA and coordinates an elaborate cellular response that includes ample transcriptional reprogramming. Recent work has established two major groups of replication stress-induced genes in Saccharomyces cerevisiae, the DNA damage response (DDR) genes and G 1/S cell cycle (CC) genes. In both cases, transcriptional activation is mediated via checkpoint-dependent inhibition of a transcriptional repressor (Crt1 for DDR and Nrm1 for CC) that participates in negative feedback regulation. This repressor-mediated regulation enables transcription to be rapidly repressed once cells have dealt with the replication stress. The recent finding of a new class of CC genes, named "switch genes," further uncovers a mode of transcription regulation that prevents overexpression of replication stress induced genes during G 1. Collectively, these findings highlight the need for mechanisms that tightly control replication stress-induced transcription, allowing rapid transcriptional activation during replication stress but also avoiding long-term hyperaccumulation of the induced protein product that may be detrimental to cell proliferation.

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Year:  2012        PMID: 22895177      PMCID: PMC3466515          DOI: 10.4161/cc.21197

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  69 in total

1.  Distinct roles of yeast MEC and RAD checkpoint genes in transcriptional induction after DNA damage and implications for function.

Authors:  G L Kiser; T A Weinert
Journal:  Mol Biol Cell       Date:  1996-05       Impact factor: 4.138

2.  Mechanisms that help the yeast cell cycle clock tick: G2 cyclins transcriptionally activate G2 cyclins and repress G1 cyclins.

Authors:  A Amon; M Tyers; B Futcher; K Nasmyth
Journal:  Cell       Date:  1993-09-24       Impact factor: 41.582

3.  The p53-mdm-2 autoregulatory feedback loop.

Authors:  X Wu; J H Bayle; D Olson; A J Levine
Journal:  Genes Dev       Date:  1993-07       Impact factor: 11.361

4.  DNA damage induction of ribonucleotide reductase.

Authors:  S J Elledge; R W Davis
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

5.  Rad53-dependent phosphorylation of Swi6 and down-regulation of CLN1 and CLN2 transcription occur in response to DNA damage in Saccharomyces cerevisiae.

Authors:  J M Sidorova; L L Breeden
Journal:  Genes Dev       Date:  1997-11-15       Impact factor: 11.361

6.  Regulation of RAD53 by the ATM-like kinases MEC1 and TEL1 in yeast cell cycle checkpoint pathways.

Authors:  Y Sanchez; B A Desany; W J Jones; Q Liu; B Wang; S J Elledge
Journal:  Science       Date:  1996-01-19       Impact factor: 47.728

7.  The DNA replication and damage checkpoint pathways induce transcription by inhibition of the Crt1 repressor.

Authors:  M Huang; Z Zhou; S J Elledge
Journal:  Cell       Date:  1998-09-04       Impact factor: 41.582

8.  Expression of the yeast UB14 gene increases in response to DNA-damaging agents and in meiosis.

Authors:  J M Treger; K A Heichman; K McEntee
Journal:  Mol Cell Biol       Date:  1988-03       Impact factor: 4.272

9.  Spk1/Rad53 is regulated by Mec1-dependent protein phosphorylation in DNA replication and damage checkpoint pathways.

Authors:  Z Sun; D S Fay; F Marini; M Foiani; D F Stern
Journal:  Genes Dev       Date:  1996-02-15       Impact factor: 11.361

10.  The SAD1/RAD53 protein kinase controls multiple checkpoints and DNA damage-induced transcription in yeast.

Authors:  J B Allen; Z Zhou; W Siede; E C Friedberg; S J Elledge
Journal:  Genes Dev       Date:  1994-10-15       Impact factor: 11.361

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  11 in total

Review 1.  Topology and control of the cell-cycle-regulated transcriptional circuitry.

Authors:  Steven B Haase; Curt Wittenberg
Journal:  Genetics       Date:  2014-01       Impact factor: 4.562

Review 2.  Maintenance of genome stability: the unifying role of interconnections between the DNA damage response and RNA-processing pathways.

Authors:  B Mikolaskova; M Jurcik; I Cipakova; M Kretova; M Chovanec; L Cipak
Journal:  Curr Genet       Date:  2018-03-01       Impact factor: 3.886

Review 3.  Checkpoint regulation of replication forks: global or local?

Authors:  Divya Ramalingam Iyer; Nicholas Rhind
Journal:  Biochem Soc Trans       Date:  2013-12       Impact factor: 5.407

4.  Turned on by genotoxic stress.

Authors:  Anna Travesa; Curt Wittenberg
Journal:  Cell Cycle       Date:  2012-08-16       Impact factor: 4.534

5.  Mutations in the Non-Catalytic Subunit Dpb2 of DNA Polymerase Epsilon Affect the Nrm1 Branch of the DNA Replication Checkpoint.

Authors:  Michał Dmowski; Justyna Rudzka; Judith L Campbell; Piotr Jonczyk; Iwona J Fijałkowska
Journal:  PLoS Genet       Date:  2017-01-20       Impact factor: 5.917

Review 6.  The Intra-S Checkpoint Responses to DNA Damage.

Authors:  Divya Ramalingam Iyer; Nicholas Rhind
Journal:  Genes (Basel)       Date:  2017-02-17       Impact factor: 4.096

Review 7.  Control of cell cycle transcription during G1 and S phases.

Authors:  Cosetta Bertoli; Jan M Skotheim; Robertus A M de Bruin
Journal:  Nat Rev Mol Cell Biol       Date:  2013-08       Impact factor: 94.444

8.  The DNA damage checkpoint response to replication stress: A Game of Forks.

Authors:  Rachel Jossen; Rodrigo Bermejo
Journal:  Front Genet       Date:  2013-03-13       Impact factor: 4.599

9.  Binding specificity of the G1/S transcriptional regulators in budding yeast.

Authors:  Michael R Harris; Dave Lee; Sarah Farmer; Noel F Lowndes; Robertus A M de Bruin
Journal:  PLoS One       Date:  2013-04-04       Impact factor: 3.240

Review 10.  Diverse roles of Dpb2, the non-catalytic subunit of DNA polymerase ε.

Authors:  Michał Dmowski; Iwona J Fijałkowska
Journal:  Curr Genet       Date:  2017-05-17       Impact factor: 3.886

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