Literature DB >> 22891645

Discovery of highly potent and selective small molecule ADAMTS-5 inhibitors that inhibit human cartilage degradation via encoded library technology (ELT).

Hongfeng Deng1, Heather O'Keefe, Christopher P Davie, Kenneth E Lind, Raksha A Acharya, G Joseph Franklin, Jonathan Larkin, Rosalie Matico, Michael Neeb, Monique M Thompson, Thomas Lohr, Jeffrey W Gross, Paolo A Centrella, Gary K O'Donovan, Katie L Sargent Bedard, Kurt van Vloten, Sibongile Mataruse, Steven R Skinner, Svetlana L Belyanskaya, Tiffany Y Carpenter, Todd W Shearer, Matthew A Clark, John W Cuozzo, Christopher C Arico-Muendel, Barry A Morgan.   

Abstract

The metalloprotease ADAMTS-5 is considered a potential target for the treatment of osteoarthritis. To identify selective inhibitors of ADAMTS-5, we employed encoded library technology (ELT), which enables affinity selection of small molecule binders from complex mixtures by DNA tagging. Selection of ADAMTS-5 against a four-billion member ELT library led to a novel inhibitor scaffold not containing a classical zinc-binding functionality. One exemplar, (R)-N-((1-(4-(but-3-en-1-ylamino)-6-(((2-(thiophen-2-yl)thiazol-4-yl)methyl)amino)-1,3,5-triazin-2-yl)pyrrolidin-2-yl)methyl)-4-propylbenzenesulfonamide (8), inhibited ADAMTS-5 with IC(50) = 30 nM, showing >50-fold selectivity against ADAMTS-4 and >1000-fold selectivity against ADAMTS-1, ADAMTS-13, MMP-13, and TACE. Extensive SAR studies showed that potency and physicochemical properties of the scaffold could be further improved. Furthermore, in a human osteoarthritis cartilage explant study, compounds 8 and 15f inhibited aggrecanase-mediated (374)ARGS neoepitope release from aggrecan and glycosaminoglycan in response to IL-1β/OSM stimulation. This study provides the first small molecule evidence for the critical role of ADAMTS-5 in human cartilage degradation.

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Year:  2012        PMID: 22891645     DOI: 10.1021/jm300449x

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  35 in total

1.  Discovery of Potent and Selective Inhibitors for ADAMTS-4 through DNA-Encoded Library Technology (ELT).

Authors:  Yun Ding; Heather O'Keefe; Jennifer L DeLorey; David I Israel; Jeffrey A Messer; Cynthia H Chiu; Steven R Skinner; Rosalie E Matico; Monique F Murray-Thompson; Fan Li; Matthew A Clark; John W Cuozzo; Christopher Arico-Muendel; Barry A Morgan
Journal:  ACS Med Chem Lett       Date:  2015-07-07       Impact factor: 4.345

2.  Discovery, SAR, and X-ray Binding Mode Study of BCATm Inhibitors from a Novel DNA-Encoded Library.

Authors:  Hongfeng Deng; Jingye Zhou; Flora S Sundersingh; Jennifer Summerfield; Don Somers; Jeffrey A Messer; Alexander L Satz; Nicolas Ancellin; Christopher C Arico-Muendel; Katie L Sargent Bedard; Arthur Beljean; Svetlana L Belyanskaya; Ryan Bingham; Sarah E Smith; Eric Boursier; Paul Carter; Paolo A Centrella; Matthew A Clark; Chun-Wa Chung; Christopher P Davie; Jennifer L Delorey; Yun Ding; G Joseph Franklin; LaShadric C Grady; Kenny Herry; Clare Hobbs; Christopher S Kollmann; Barry A Morgan; Laura J Pothier Kaushansky; Quan Zhou
Journal:  ACS Med Chem Lett       Date:  2015-07-21       Impact factor: 4.345

3.  RIP3 induces apoptosis independent of pronecrotic kinase activity.

Authors:  Pratyusha Mandal; Scott B Berger; Sirika Pillay; Kenta Moriwaki; Chunzi Huang; Hongyan Guo; John D Lich; Joshua Finger; Viera Kasparcova; Bart Votta; Michael Ouellette; Bryan W King; David Wisnoski; Ami S Lakdawala; Michael P DeMartino; Linda N Casillas; Pamela A Haile; Clark A Sehon; Robert W Marquis; Jason Upton; Lisa P Daley-Bauer; Linda Roback; Nancy Ramia; Cole M Dovey; Jan E Carette; Francis Ka-Ming Chan; John Bertin; Peter J Gough; Edward S Mocarski; William J Kaiser
Journal:  Mol Cell       Date:  2014-11-20       Impact factor: 17.970

Review 4.  DNA-encoded chemistry: enabling the deeper sampling of chemical space.

Authors:  Robert A Goodnow; Christoph E Dumelin; Anthony D Keefe
Journal:  Nat Rev Drug Discov       Date:  2016-12-09       Impact factor: 84.694

5.  Discovery and Optimization of Potent, Selective, and in Vivo Efficacious 2-Aryl Benzimidazole BCATm Inhibitors.

Authors:  Hongfeng Deng; Jingye Zhou; Flora Sundersingh; Jeffrey A Messer; Donald O Somers; Myriam Ajakane; Christopher C Arico-Muendel; Arthur Beljean; Svetlana L Belyanskaya; Ryan Bingham; Emily Blazensky; Anne-Benedicte Boullay; Eric Boursier; Jing Chai; Paul Carter; Chun-Wa Chung; Alain Daugan; Yun Ding; Kenny Herry; Clare Hobbs; Eric Humphries; Christopher Kollmann; Van Loc Nguyen; Edwige Nicodeme; Sarah E Smith; Nerina Dodic; Nicolas Ancellin
Journal:  ACS Med Chem Lett       Date:  2016-02-08       Impact factor: 4.345

6.  DNA Barcoding a Complete Matrix of Stereoisomeric Small Molecules.

Authors:  Christopher J Gerry; Mathias J Wawer; Paul A Clemons; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2019-06-25       Impact factor: 15.419

7.  The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.

Authors:  Edgar R Wood; Randy Bledsoe; Jing Chai; Philias Daka; Hongfeng Deng; Yun Ding; Sarah Harris-Gurley; Luz Helena Kryn; Eldridge Nartey; James Nichols; Robert T Nolte; Ninad Prabhu; Cecil Rise; Timothy Sheahan; J Brad Shotwell; Danielle Smith; Vince Tai; J David Taylor; Ginger Tomberlin; Liping Wang; Bruce Wisely; Shihyun You; Bing Xia; Hamilton Dickson
Journal:  J Biol Chem       Date:  2015-06-08       Impact factor: 5.157

8.  Open-Air Alkylation Reactions in Photoredox-Catalyzed DNA-Encoded Library Synthesis.

Authors:  James P Phelan; Simon B Lang; Jaehoon Sim; Simon Berritt; Andrew J Peat; Katelyn Billings; Lijun Fan; Gary A Molander
Journal:  J Am Chem Soc       Date:  2019-02-12       Impact factor: 15.419

9.  Discovery of cofactor-specific, bactericidal Mycobacterium tuberculosis InhA inhibitors using DNA-encoded library technology.

Authors:  Holly H Soutter; Paolo Centrella; Matthew A Clark; John W Cuozzo; Christoph E Dumelin; Marie-Aude Guie; Sevan Habeshian; Anthony D Keefe; Kaitlyn M Kennedy; Eric A Sigel; Dawn M Troast; Ying Zhang; Andrew D Ferguson; Gareth Davies; Eleanor R Stead; Jason Breed; Prashanti Madhavapeddi; Jon A Read
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-18       Impact factor: 11.205

10.  The IL-1β/AP-1/miR-30a/ADAMTS-5 axis regulates cartilage matrix degradation in human osteoarthritis.

Authors:  Quanbo Ji; Xiaojie Xu; Qiang Zhang; Lei Kang; Yameng Xu; Ke Zhang; Ling Li; Yingchun Liang; Tian Hong; Qinong Ye; Yan Wang
Journal:  J Mol Med (Berl)       Date:  2016-04-11       Impact factor: 4.599

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