Literature DB >> 22871896

Weakly nonlinear analysis of symmetry breaking in cell polarity models.

Boris Rubinstein1, Brian D Slaughter, Rong Li.   

Abstract

Spontaneous symmetry breaking leading to polarization of the cell is a key step initiating many morphogenetic processes. In addition to experimental studies, model-based theoretical description helps to understand the conditions and limitations of this process. Such description is limited usually to linear stability analysis supplied by the numerical simulations to establish the dependence of the polarization dynamics on the model parameters. Here we describe the application of a powerful weakly nonlinear analysis method to a minimalistic model characterized by the conservation of mass of the protein governing the polarization dynamics.

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Year:  2012        PMID: 22871896      PMCID: PMC3437610          DOI: 10.1088/1478-3975/9/4/045006

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  12 in total

1.  Spontaneous cell polarization through actomyosin-based delivery of the Cdc42 GTPase.

Authors:  Roland Wedlich-Soldner; Steve Altschuler; Lani Wu; Rong Li
Journal:  Science       Date:  2003-01-30       Impact factor: 47.728

Review 2.  Physical model of cellular symmetry breaking.

Authors:  Jasper van der Gucht; Cécile Sykes
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-07       Impact factor: 10.005

Review 3.  Neuronal polarity.

Authors:  Sabina Tahirovic; Frank Bradke
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-09       Impact factor: 10.005

4.  Dynamics of Cdc42 network embodies a Turing-type mechanism of yeast cell polarity.

Authors:  Andrew B Goryachev; Alexandra V Pokhilko
Journal:  FEBS Lett       Date:  2008-03-31       Impact factor: 4.124

5.  Rupture of thin liquid films: generalization of weakly nonlinear theory.

Authors:  B Y Rubinstein; A M Leshansky
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-03-21

6.  ASYMPTOTIC AND BIFURCATION ANALYSIS OF WAVE-PINNING IN A REACTION-DIFFUSION MODEL FOR CELL POLARIZATION.

Authors:  Yoichiro Mori; Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  SIAM J Appl Math       Date:  2011       Impact factor: 2.080

Review 7.  Symmetry breaking in the life cycle of the budding yeast.

Authors:  Brian D Slaughter; Sarah E Smith; Rong Li
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-09       Impact factor: 10.005

Review 8.  Calling heads from tails: the role of mathematical modeling in understanding cell polarization.

Authors:  Matthew D Onsum; Christopher V Rao
Journal:  Curr Opin Cell Biol       Date:  2009-01-23       Impact factor: 8.382

Review 9.  A comparison of mathematical models for polarization of single eukaryotic cells in response to guided cues.

Authors:  Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  PLoS Comput Biol       Date:  2011-04-28       Impact factor: 4.475

10.  A mass conserved reaction-diffusion system captures properties of cell polarity.

Authors:  Mikiya Otsuji; Shuji Ishihara; Carl Co; Kozo Kaibuchi; Atsushi Mochizuki; Shinya Kuroda
Journal:  PLoS Comput Biol       Date:  2007-04-30       Impact factor: 4.475

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  10 in total

1.  Local perturbation analysis: a computational tool for biophysical reaction-diffusion models.

Authors:  William R Holmes; May Anne Mata; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2015-01-20       Impact factor: 4.033

2.  Spherical Caps in Cell Polarization.

Authors:  Rocky Diegmiller; Hadrien Montanelli; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2018-06-20       Impact factor: 4.033

3.  A model for intracellular actin waves explored by nonlinear local perturbation analysis.

Authors:  May Anne Mata; Meghan Dutot; Leah Edelstein-Keshet; William R Holmes
Journal:  J Theor Biol       Date:  2013-07-02       Impact factor: 2.691

4.  An efficient, nonlinear stability analysis for detecting pattern formation in reaction diffusion systems.

Authors:  William R Holmes
Journal:  Bull Math Biol       Date:  2013-10-25       Impact factor: 1.758

5.  Cells use molecular working memory to navigate in changing chemoattractant fields.

Authors:  Akhilesh Nandan; Abhishek Das; Robert Lott; Aneta Koseska
Journal:  Elife       Date:  2022-06-06       Impact factor: 8.713

6.  Effects of 3D geometries on cellular gradient sensing and polarization.

Authors:  Fabian Spill; Vivi Andasari; Michael Mak; Roger D Kamm; Muhammad H Zaman
Journal:  Phys Biol       Date:  2016-06-25       Impact factor: 2.583

7.  On system-spanning demixing properties of cell polarization.

Authors:  Fabian Bergmann; Walter Zimmermann
Journal:  PLoS One       Date:  2019-06-21       Impact factor: 3.240

8.  Independence of symmetry breaking on Bem1-mediated autocatalytic activation of Cdc42.

Authors:  Sarah E Smith; Boris Rubinstein; Inês Mendes Pinto; Brian D Slaughter; Jay R Unruh; Rong Li
Journal:  J Cell Biol       Date:  2013-09-23       Impact factor: 10.539

9.  Spatial modeling of the membrane-cytosolic interface in protein kinase signal transduction.

Authors:  Wolfgang Giese; Gregor Milicic; Andreas Schröder; Edda Klipp
Journal:  PLoS Comput Biol       Date:  2018-04-09       Impact factor: 4.475

10.  Principles that govern competition or co-existence in Rho-GTPase driven polarization.

Authors:  Jian-Geng Chiou; Samuel A Ramirez; Timothy C Elston; Thomas P Witelski; David G Schaeffer; Daniel J Lew
Journal:  PLoS Comput Biol       Date:  2018-04-12       Impact factor: 4.475

  10 in total

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