Literature DB >> 22859296

Structural basis of recruitment of DNA polymerase ζ by interaction between REV1 and REV7 proteins.

Sotaro Kikuchi1, Kodai Hara, Toshiyuki Shimizu, Mamoru Sato, Hiroshi Hashimoto.   

Abstract

REV1, REV3, and REV7 are pivotal proteins in translesion DNA synthesis, which allows DNA synthesis even in the presence of DNA damage. REV1 and REV3 are error-prone DNA polymerases and function as inserter and extender polymerases in this process, respectively. REV7 interacts with both REV1 and REV3, acting as an adaptor that functionally links the two, although the structural basis of this collaboration remains unclear. Here, we show the crystal structure of the ternary complex, composed of the C-terminal domain of human REV1, REV7, and a REV3 fragment. The REV1 C-terminal domain adopts a four-helix bundle that interacts with REV7. A linker region between helices 2 and 3, which is conserved among mammals, interacts with the β-sheet of REV7. Remarkably, the REV7-binding interface is distinct from the binding site of DNA polymerase η or κ. Thus, the REV1 C-terminal domain might facilitate polymerase switching by providing a scaffold for both inserter and extender polymerases to bind. Our structure reveals the basis of DNA polymerase ζ (a complex of REV3 and REV7) recruitment to the stalled replication fork and provides insight into the mechanism of polymerase switching.

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Year:  2012        PMID: 22859296      PMCID: PMC3460479          DOI: 10.1074/jbc.M112.396838

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

1.  Interaction of hREV1 with three human Y-family DNA polymerases.

Authors:  Eiji Ohashi; Yoshiki Murakumo; Naoko Kanjo; Jun-Ichi Akagi; Chikahide Masutani; Fumio Hanaoka; Haruo Ohmori
Journal:  Genes Cells       Date:  2004-06       Impact factor: 1.891

2.  Structure of the mitotic checkpoint complex.

Authors:  William C H Chao; Kiran Kulkarni; Ziguo Zhang; Eric H Kong; David Barford
Journal:  Nature       Date:  2012-03-21       Impact factor: 49.962

3.  Multifaceted recognition of vertebrate Rev1 by translesion polymerases ζ and κ.

Authors:  Jessica Wojtaszek; Jiangxin Liu; Sanjay D'Souza; Su Wang; Yaohua Xue; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

Review 4.  PCNA, the maestro of the replication fork.

Authors:  George-Lucian Moldovan; Boris Pfander; Stefan Jentsch
Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

5.  Purification, crystallization and initial X-ray diffraction study of human REV7 in complex with a REV3 fragment.

Authors:  Kodai Hara; Toshiyuki Shimizu; Satoru Unzai; Satoko Akashi; Mamoru Sato; Hiroshi Hashimoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-11-27

6.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

7.  Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7.

Authors:  Y Murakumo; Y Ogura; H Ishii; S Numata; M Ichihara; C M Croce; R Fishel; M Takahashi
Journal:  J Biol Chem       Date:  2001-08-02       Impact factor: 5.157

8.  Error-prone translesion synthesis mediates acquired chemoresistance.

Authors:  Kun Xie; Jason Doles; Michael T Hemann; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-10       Impact factor: 11.205

9.  Complex formation of yeast Rev1 with DNA polymerase eta.

Authors:  Narottam Acharya; Lajos Haracska; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2007-09-17       Impact factor: 4.272

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  55 in total

1.  The architecture of yeast DNA polymerase ζ.

Authors:  Yacob Gómez-Llorente; Radhika Malik; Rinku Jain; Jayati Roy Choudhury; Robert E Johnson; Louise Prakash; Satya Prakash; Iban Ubarretxena-Belandia; Aneel K Aggarwal
Journal:  Cell Rep       Date:  2013-10-10       Impact factor: 9.423

Review 2.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

3.  The AAA+ ATPase TRIP13 remodels HORMA domains through N-terminal engagement and unfolding.

Authors:  Qiaozhen Ye; Dong Hyun Kim; Ihsan Dereli; Scott C Rosenberg; Goetz Hagemann; Franz Herzog; Attila Tóth; Don W Cleveland; Kevin D Corbett
Journal:  EMBO J       Date:  2017-06-28       Impact factor: 11.598

4.  Rev7 dimerization is important for assembly and function of the Rev1/Polζ translesion synthesis complex.

Authors:  Alessandro A Rizzo; Faye-Marie Vassel; Nimrat Chatterjee; Sanjay D'Souza; Yunfeng Li; Bing Hao; Michael T Hemann; Graham C Walker; Dmitry M Korzhnev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

Review 5.  Translesion DNA Synthesis in Cancer: Molecular Mechanisms and Therapeutic Opportunities.

Authors:  Maroof K Zafar; Robert L Eoff
Journal:  Chem Res Toxicol       Date:  2017-09-28       Impact factor: 3.739

6.  Human Pol ζ purified with accessory subunits is active in translesion DNA synthesis and complements Pol η in cisplatin bypass.

Authors:  Young-Sam Lee; Mark T Gregory; Wei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

7.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

8.  Structure and functional analysis of the BRCT domain of translesion synthesis DNA polymerase Rev1.

Authors:  John M Pryor; Lokesh Gakhar; M Todd Washington
Journal:  Biochemistry       Date:  2012-12-20       Impact factor: 3.162

Review 9.  REV1 and DNA polymerase zeta in DNA interstrand crosslink repair.

Authors:  Shilpy Sharma; Christine E Canman
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

10.  Identification of the first small-molecule inhibitor of the REV7 DNA repair protein interaction.

Authors:  Marcelo L Actis; Nigus D Ambaye; Benjamin J Evison; Youming Shao; Murugendra Vanarotti; Akira Inoue; Ezelle T McDonald; Sotaro Kikuchi; Richard Heath; Kodai Hara; Hiroshi Hashimoto; Naoaki Fujii
Journal:  Bioorg Med Chem       Date:  2016-07-16       Impact factor: 3.641

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