Literature DB >> 20054135

Purification, crystallization and initial X-ray diffraction study of human REV7 in complex with a REV3 fragment.

Kodai Hara1, Toshiyuki Shimizu, Satoru Unzai, Satoko Akashi, Mamoru Sato, Hiroshi Hashimoto.   

Abstract

REV7 is involved in various cellular functions including DNA replication, signal transduction and cell-cycle regulation. In DNA replication, REV7 interacts with REV3 and forms DNA polymerase zeta, which plays a central role in error-prone DNA synthesis. REV3 is a catalytic subunit and its activity is stimulated by REV7. To clarify the structural basis of the interaction between REV7 and REV3, human REV7 was crystallized in complex with a REV3 fragment. Two crystal forms were obtained. Crystal forms I and II belonged to space groups P2(1), with unit-cell parameters a = 43.8, b = 50.0, c = 107.3 A, beta = 96.9 degrees , and P4(1)2(1)2 or P4(3)2(1)2, with unit-cell parameters a = b = 76.6, c = 118.4 A, respectively.

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Year:  2009        PMID: 20054135      PMCID: PMC2802887          DOI: 10.1107/S1744309109046181

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Size-distribution analysis of proteins by analytical ultracentrifugation: strategies and application to model systems.

Authors:  Peter Schuck; Matthew A Perugini; Noreen R Gonzales; Geoffrey J Howlett; Dieter Schubert
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

3.  Disruption of the developmentally regulated Rev3l gene causes embryonic lethality.

Authors:  J Wittschieben; M K Shivji; E Lalani; M A Jacobs; F Marini; P J Gearhart; I Rosewell; G Stamp; R D Wood
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

4.  MAD2B is an inhibitor of the anaphase-promoting complex.

Authors:  J Chen; G Fang
Journal:  Genes Dev       Date:  2001-07-15       Impact factor: 11.361

5.  A human REV7 homolog that interacts with the polymerase zeta catalytic subunit hREV3 and the spindle assembly checkpoint protein hMAD2.

Authors:  Y Murakumo; T Roth; H Ishii; D Rasio; S Numata; C M Croce; R Fishel
Journal:  J Biol Chem       Date:  2000-02-11       Impact factor: 5.157

6.  Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7.

Authors:  Y Murakumo; Y Ogura; H Ishii; S Numata; M Ichihara; C M Croce; R Fishel; M Takahashi
Journal:  J Biol Chem       Date:  2001-08-02       Impact factor: 5.157

7.  MAD2B, a novel TCF4-binding protein, modulates TCF4-mediated epithelial-mesenchymal transdifferentiation.

Authors:  Chun-Fu Hong; Yu-Ting Chou; Young-Sun Lin; Cheng-Wen Wu
Journal:  J Biol Chem       Date:  2009-05-14       Impact factor: 5.157

8.  The mechanism of untargeted mutagenesis in UV-irradiated yeast.

Authors:  C W Lawrence; R B Christensen
Journal:  Mol Gen Genet       Date:  1982

9.  Ultraviolet-induced reversion of cyc1 alleles in radiation-sensitive strains of yeast. III. rev3 mutant strains.

Authors:  C W Lawrence; R B Christensen
Journal:  Genetics       Date:  1979-06       Impact factor: 4.562

10.  Structure and enzymatic properties of a stable complex of the human REV1 and REV7 proteins.

Authors:  Yuji Masuda; Mika Ohmae; Kenji Masuda; Kenji Kamiya
Journal:  J Biol Chem       Date:  2003-01-15       Impact factor: 5.157

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  16 in total

1.  DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.

Authors:  Rajat Gupta; Kumar Somyajit; Takeo Narita; Elina Maskey; Andre Stanlie; Magdalena Kremer; Dimitris Typas; Michael Lammers; Niels Mailand; Andre Nussenzweig; Jiri Lukas; Chunaram Choudhary
Journal:  Cell       Date:  2018-04-12       Impact factor: 41.582

2.  Rev7 dimerization is important for assembly and function of the Rev1/Polζ translesion synthesis complex.

Authors:  Alessandro A Rizzo; Faye-Marie Vassel; Nimrat Chatterjee; Sanjay D'Souza; Yunfeng Li; Bing Hao; Michael T Hemann; Graham C Walker; Dmitry M Korzhnev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

3.  Crystallization and X-ray diffraction analysis of the ternary complex of the C-terminal domain of human REV1 in complex with REV7 bound to a REV3 fragment involved in translesion DNA synthesis.

Authors:  Sotaro Kikuchi; Kodai Hara; Toshiyuki Shimizu; Mamoru Sato; Hiroshi Hashimoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-07-27

4.  Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric polymerase (Pol) ζ, and Pol κ.

Authors:  Jessica Wojtaszek; Chul-Jin Lee; Sanjay D'Souza; Brenda Minesinger; Hyungjin Kim; Alan D D'Andrea; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

5.  Structural basis of recruitment of DNA polymerase ζ by interaction between REV1 and REV7 proteins.

Authors:  Sotaro Kikuchi; Kodai Hara; Toshiyuki Shimizu; Mamoru Sato; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

6.  A missense mutation in Rev7 disrupts formation of Polζ, impairing mouse development and repair of genotoxic agent-induced DNA lesions.

Authors:  Maryam Khalaj; Abdolrahim Abbasi; Hiroshi Yamanishi; Kouyou Akiyama; Shuso Wakitani; Sotaro Kikuchi; Michiko Hirose; Misako Yuzuriha; Masaki Magari; Heba A Degheidy; Kuniya Abe; Atsuo Ogura; Hiroshi Hashimoto; Tetsuo Kunieda
Journal:  J Biol Chem       Date:  2013-12-19       Impact factor: 5.157

Review 7.  The Rev1-Polζ translesion synthesis mutasome: Structure, interactions and inhibition.

Authors:  Alessandro A Rizzo; Dmitry M Korzhnev
Journal:  Enzymes       Date:  2019-08-09

8.  The chromosome axis controls meiotic events through a hierarchical assembly of HORMA domain proteins.

Authors:  Yumi Kim; Scott C Rosenberg; Christine L Kugel; Nora Kostow; Ofer Rog; Vitaliy Davydov; Tiffany Y Su; Abby F Dernburg; Kevin D Corbett
Journal:  Dev Cell       Date:  2014-11-06       Impact factor: 12.270

9.  Identification of the first small-molecule inhibitor of the REV7 DNA repair protein interaction.

Authors:  Marcelo L Actis; Nigus D Ambaye; Benjamin J Evison; Youming Shao; Murugendra Vanarotti; Akira Inoue; Ezelle T McDonald; Sotaro Kikuchi; Richard Heath; Kodai Hara; Hiroshi Hashimoto; Naoaki Fujii
Journal:  Bioorg Med Chem       Date:  2016-07-16       Impact factor: 3.641

10.  Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).

Authors:  Kodai Hara; Shota Taharazako; Masanori Ikeda; Hiroki Fujita; Yoshiko Mikami; Sotaro Kikuchi; Asami Hishiki; Hideshi Yokoyama; Yoshinobu Ishikawa; Shin-Ichiro Kanno; Kozo Tanaka; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2017-09-08       Impact factor: 5.157

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