Literature DB >> 22851279

Lanthanide binding and IgG affinity construct: potential applications in solution NMR, MRI, and luminescence microscopy.

Adam W Barb1, Tienhuei Grace Ho, Heather Flanagan-Steet, James H Prestegard.   

Abstract

Paramagnetic lanthanide ions when bound to proteins offer great potential for structural investigations that utilize solution nuclear magnetic resonance spectroscopy, magnetic resonance imaging, or optical microscopy. However, many proteins do not have native metal ion binding sites and engineering a chimeric protein to bind an ion while retaining affinity for a protein of interest represents a significant challenge. Here we report the characterization of an immunoglobulin G-binding protein redesigned to include a lanthanide binding motif in place of a loop between two helices (Z-L2LBT). It was shown to bind Tb³⁺ with 130 nM affinity. Ions such as Dy³⁺, Yb³⁺, and Ce³⁺ produce paramagnetic effects on NMR spectra and the utility of these effects is illustrated by their use in determining a structural model of the metal-complexed Z-L2LBT protein and a preliminary characterization of the dynamic distribution of IgG Fc glycan positions. Furthermore, this designed protein is demonstrated to be a novel IgG-binding reagent for magnetic resonance imaging (Z-L2LBT:Gd³⁺ complex) and luminescence microscopy (Z-L2LBT: Tb³⁺ complex).
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 22851279      PMCID: PMC3526988          DOI: 10.1002/pro.2133

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  52 in total

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4.  Double-lanthanide-binding tags for macromolecular crystallographic structure determination.

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5.  Gadolinium tagging for high-precision measurements of 6 nm distances in protein assemblies by EPR.

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6.  Two-photon laser scanning fluorescence microscopy.

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  9 in total

Review 1.  General lack of structural characterization of chemically synthesized long peptides.

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Authors:  Adam W Barb; Ganesh P Subedi
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4.  Structural Aspects of Heparan Sulfate Binding to Robo1-Ig1-2.

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Review 5.  Paramagnetic NMR in drug discovery.

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6.  NMR analysis suggests the terminal domains of Robo1 remain extended but are rigidified in the presence of heparan sulfate.

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7.  Engineered ferritin for lanthanide binding.

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Journal:  PLoS One       Date:  2018-08-13       Impact factor: 3.240

Review 8.  Novel NMR Avenues to Explore the Conformation and Interactions of Glycans.

Authors:  Pablo Valverde; Jon I Quintana; Jose I Santos; Ana Ardá; Jesús Jiménez-Barbero
Journal:  ACS Omega       Date:  2019-08-19

Review 9.  Sparse labeling of proteins: structural characterization from long range constraints.

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  9 in total

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