Literature DB >> 12672106

A powerful combinatorial screen to identify high-affinity terbium(III)-binding peptides.

Mark Nitz1, Katherine J Franz, Rebecca L Maglathlin, Barbara Imperiali.   

Abstract

Lanthanide-binding tags (LBTs) are protein fusion partners consisting of encoded amino acids that bind lanthanide ions with high affinity. Herein, we present a new screening methodology for the identification of new LBT sequences with high affinity for Tb(3+) ions and intense luminescence properties. This methodology utilizes solid-phase split-and-pool combinatorial peptide synthesis. Orthogonally cleavable linkers allow an efficient two-step screening procedure. The initial screen avoids the interference caused by on-bead screening by photochemically releasing a portion of the peptides into an agarose matrix for evaluation. The secondary screen further characterizes each winning sequence in a defined aqueous solution. Employment of this methodology on a series of focused combinatorial libraries yielded a linear peptide sequence of 17 encoded amino acids that demonstrated a 140-fold increase in affinity (57 nM dissociation constant, K(D)) over previously reported lanthanide-binding peptides. This linear sequence was macrocyclized by introducing a disulfide bond between flanking cysteine residues to produce a peptide with a 2-nM apparent dissociation constant for Tb(3+) ions.Supporting information for this article is available on the WWW under http://www.chemphyschem.org or from the author.

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Year:  2003        PMID: 12672106     DOI: 10.1002/cbic.200390047

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  41 in total

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Authors:  Michael J Scheuermann; Christina R Forbes; Neal J Zondlo
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2.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

Authors:  Katja Barthelmes; Anne M Reynolds; Ezra Peisach; Hendrik R A Jonker; Nicholas J DeNunzio; Karen N Allen; Barbara Imperiali; Harald Schwalbe
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

3.  Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect.

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4.  Probing Polytopic Membrane Protein-Substrate Interactions by Luminescence Resonance Energy Transfer.

Authors:  Monika Musial-Siwek; Marcie B Jaffee; Barbara Imperiali
Journal:  J Am Chem Soc       Date:  2016-03-14       Impact factor: 15.419

Review 5.  Application of metal coordination chemistry to explore and manipulate cell biology.

Authors:  Kathryn L Haas; Katherine J Franz
Journal:  Chem Rev       Date:  2009-10       Impact factor: 60.622

Review 6.  Paramagnetic labelling of proteins and oligonucleotides for NMR.

Authors:  Xun-Cheng Su; Gottfried Otting
Journal:  J Biomol NMR       Date:  2009-06-16       Impact factor: 2.835

7.  Luminescence resonance energy transfer in the cytoplasm of live Escherichia coli cells.

Authors:  Daniel González; Nayanish Lokhande; Swaraj Vadde; Qi Zhao; Aaron Cassill; Robert Renthal
Journal:  Biochemistry       Date:  2011-07-21       Impact factor: 3.162

8.  Time-resolved luminescence detection of spleen tyrosine kinase activity through terbium sensitization.

Authors:  Andrew M Lipchik; Laurie L Parker
Journal:  Anal Chem       Date:  2013-02-15       Impact factor: 6.986

9.  Reprogramming EF-hands for design of catalytically amplified lanthanide sensors.

Authors:  Korrie L Mack; Olesia V Moroz; Yurii S Moroz; Alissa B Olsen; Jaclyn M McLaughlin; Ivan V Korendovych
Journal:  J Biol Inorg Chem       Date:  2013-02-19       Impact factor: 3.358

10.  Charge density-dependent modifications of hydration shell waters by Hofmeister ions.

Authors:  Feng Guo; Joel M Friedman
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

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