Literature DB >> 22840822

Advanced proteomic liquid chromatography.

Fang Xie1, Richard D Smith, Yufeng Shen.   

Abstract

Liquid chromatography coupled with mass spectrometry is the predominant platform used to analyze proteomics samples consisting of large numbers of proteins and their proteolytic products (e.g., truncated polypeptides) and spanning a wide range of relative concentrations. This review provides an overview of advanced capillary liquid chromatography techniques and methodologies that greatly improve separation resolving power and proteomics analysis coverage, sensitivity, and throughput.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID： 22840822      PMCID： PMC3463731          DOI： 10.1016/j.chroma.2012.06.098

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN： 0021-9673            Impact factor:   4.759


  66 in total

1.  Ultrasensitive proteomics using high-efficiency on-line micro-SPE-nanoLC-nanoESI MS and MS/MS.

Authors:  Yufeng Shen; Nikola Tolić; Christophe Masselon; Ljiljana Pasa-Tolić; David G Camp; Kim K Hixson; Rui Zhao; Gordon A Anderson; Richard D Smith
Journal:  Anal Chem       Date:  2004-01-01       Impact factor: 6.986

2.  High-efficiency nanoscale liquid chromatography coupled on-line with mass spectrometry using nanoelectrospray ionization for proteomics.

Authors:  Yufeng Shen; Rui Zhao; Scott J Berger; Gordon A Anderson; Nestor Rodriguez; Richard D Smith
Journal:  Anal Chem       Date:  2002-08-15       Impact factor: 6.986

3.  Multidimensional nano-HPLC for analysis of protein complexes.

Authors:  Yvonne Wagner; Albert Sickmann; Helmut E Meyer; Günther Daum
Journal:  J Am Soc Mass Spectrom       Date:  2003-09       Impact factor: 3.109

4.  Improved 2D nano-LC/MS for proteomics applications: a comparative analysis using yeast proteome.

Authors:  E Nägele; M Vollmer; P Hörth
Journal:  J Biomol Tech       Date:  2004-06

5.  High-performance liquid chromatography on small particle silica gel.

Authors:  R E Majors
Journal:  Anal Chem       Date:  1972-09-01       Impact factor: 6.986

6.  Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples.

Authors:  Akira Motoyama; John D Venable; Cristian I Ruse; John R Yates
Journal:  Anal Chem       Date:  2006-07-15       Impact factor: 6.986

7.  Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

Authors:  Sharon Gauci; Andreas O Helbig; Monique Slijper; Jeroen Krijgsveld; Albert J R Heck; Shabaz Mohammed
Journal:  Anal Chem       Date:  2009-06-01       Impact factor: 6.986

8.  Practical implementation of 2D HPLC scheme with accurate peptide retention prediction in both dimensions for high-throughput bottom-up proteomics.

Authors:  Ravi C Dwivedi; Vic Spicer; Michael Harder; Mihaela Antonovici; Werner Ens; Kenneth G Standing; John A Wilkins; Oleg V Krokhin
Journal:  Anal Chem       Date:  2008-08-08       Impact factor: 6.986

Review 9.  Comprehensive chromatographic separations in proteomics.

Authors:  P Donato; F Cacciola; L Mondello; P Dugo
Journal:  J Chromatogr A       Date:  2011-05-30       Impact factor: 4.759

10.  Direct analysis of protein complexes using mass spectrometry.

Authors:  A J Link; J Eng; D M Schieltz; E Carmack; G J Mize; D R Morris; B M Garvik; J R Yates
Journal:  Nat Biotechnol       Date:  1999-07       Impact factor: 54.908
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  14 in total

1.  Tandem Mass Tags for Comparative and Discovery Proteomics.

Authors:  Oliver Pagel; Laxmikanth Kollipara; Albert Sickmann
Journal:  Methods Mol Biol       Date:  2021

Review 2.  The impact of mass spectrometry application to screen new proteomics biomarkers in Ophthalmology.

Authors:  Bruno Nobre Lins Coronado; Felipe Bruno Santos da Cunha; Otávio de Toledo Nobrega; Aline Maria Araujo Martins
Journal:  Int Ophthalmol       Date:  2021-04-02       Impact factor: 2.031

Review 3.  A decade of proteomics studies of glaucomatous neurodegeneration.

Authors:  Gülgün Tezel
Journal:  Proteomics Clin Appl       Date:  2014-02-16       Impact factor: 3.494

4.  Development of a 45kpsi ultrahigh pressure liquid chromatography instrument for gradient separations of peptides using long microcapillary columns and sub-2μm particles.

Authors:  Kaitlin M Grinias; Justin M Godinho; Edward G Franklin; Jordan T Stobaugh; James W Jorgenson
Journal:  J Chromatogr A       Date:  2016-09-26       Impact factor: 4.759

Review 5.  A proteomics view of the molecular mechanisms and biomarkers of glaucomatous neurodegeneration.

Authors:  Gülgün Tezel
Journal:  Prog Retin Eye Res       Date:  2013-02-05       Impact factor: 21.198

Review 6.  Recent discoveries and applications involving small-molecule microarrays.

Authors:  Jiyoung A Hong; Dylan V Neel; Dina Wassaf; Francisco Caballero; Angela N Koehler
Journal:  Curr Opin Chem Biol       Date:  2013-11-27       Impact factor: 8.822

Review 7.  Middle-down approach: a choice to sequence and characterize proteins/proteomes by mass spectrometry.

Authors:  P Boomathi Pandeswari; Varatharajan Sabareesh
Journal:  RSC Adv       Date:  2019-01-02       Impact factor: 4.036

8.  Qualitative and quantitative characterization of plasma proteins when incorporating traveling wave ion mobility into a liquid chromatography-mass spectrometry workflow for biomarker discovery: use of product ion quantitation as an alternative data analysis tool for label free quantitation.

Authors:  Charlotte E Daly; Leong L Ng; Amirmansoor Hakimi; Richard Willingale; Donald J L Jones
Journal:  Anal Chem       Date:  2014-01-27       Impact factor: 6.986

9.  [Size exclusion-reverse liquid column chromatography-mass spectrometry and its application in the identification of post-translationally modified proteins in rat kidney].

Authors:  Jianmin Li; Yue Zhuo; Yida Zhang; Na Li; Jianlin Wu
Journal:  Se Pu       Date:  2021-01

10.  Optimized nonlinear gradients for reversed-phase liquid chromatography in shotgun proteomics.

Authors:  Luminita Moruz; Peter Pichler; Thomas Stranzl; Karl Mechtler; Lukas Käll
Journal:  Anal Chem       Date:  2013-07-24       Impact factor: 6.986
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