Literature DB >> 22828411

A strategy for the expression of recombinant proteins traditionally hard to purify.

Ekaterina G Frank1, John P McDonald, Kiyonobu Karata, Donald Huston, Roger Woodgate.   

Abstract

We have developed a series of plasmid vectors for the soluble expression and subsequent purification of recombinant proteins that have historically proven to be extremely difficult to purify from Escherichia coli. Instead of dramatically overproducing the target protein, it is expressed at a low basal level that facilitates the correct folding of the recombinant protein and increases its solubility. Highly active recombinant proteins that are traditionally difficult to purify are readily purified using standard affinity tags and conventional chromatography. To demonstrate the utility of these vectors, we have expressed and purified full-length human DNA polymerases η, ι, and ν from E. coli and show that the purified DNA polymerases are catalytically active in vitro. Published by Elsevier Inc.

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Year:  2012        PMID: 22828411      PMCID: PMC3575598          DOI: 10.1016/j.ab.2012.07.016

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  24 in total

1.  Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions.

Authors:  R E Johnson; M T Washington; L Haracska; S Prakash; L Prakash
Journal:  Nature       Date:  2000-08-31       Impact factor: 49.962

2.  UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

Authors:  R Woodgate; M Rajagopalan; C Lu; H Echols
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

3.  Construction of biologically functional bacterial plasmids in vitro.

Authors:  S N Cohen; A C Chang; H W Boyer; R B Helling
Journal:  Proc Natl Acad Sci U S A       Date:  1973-11       Impact factor: 11.205

4.  Fidelity of human DNA polymerase eta.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  2000-03-17       Impact factor: 5.157

5.  Preferential incorporation of G opposite template T by the low-fidelity human DNA polymerase iota.

Authors:  Y Zhang; F Yuan; X Wu; Z Wang
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

6.  Mechanisms of accurate translesion synthesis by human DNA polymerase eta.

Authors:  C Masutani; R Kusumoto; S Iwai; F Hanaoka
Journal:  EMBO J       Date:  2000-06-15       Impact factor: 11.598

7.  poliota, a remarkably error-prone human DNA polymerase.

Authors:  A Tissier; J P McDonald; E G Frank; R Woodgate
Journal:  Genes Dev       Date:  2000-07-01       Impact factor: 11.361

8.  Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.

Authors:  Deepak T Nair; Robert E Johnson; Satya Prakash; Louise Prakash; Aneel K Aggarwal
Journal:  Nature       Date:  2004-07-15       Impact factor: 49.962

9.  The biochemical requirements of DNA polymerase V-mediated translesion synthesis revisited.

Authors:  Shingo Fujii; Véronique Gasser; Robert P Fuchs
Journal:  J Mol Biol       Date:  2004-08-06       Impact factor: 5.469

10.  Replication of plasmid pSC101 in Escherichia coli K12: requirement for dnaA function.

Authors:  K Hasunuma; M Sekiguchi
Journal:  Mol Gen Genet       Date:  1977-09-09
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  14 in total

1.  Mouse DNA polymerase ι lacking the forty-two amino acids encoded by exon-2 is catalytically inactive in vitro.

Authors:  Ekaterina G Frank; John P McDonald; Wei Yang; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2016-12-21

2.  A Transition-State Perspective on Y-Family DNA Polymerase η Fidelity in Comparison with X-Family DNA Polymerases λ and β.

Authors:  Keriann Oertell; Jan Florián; Pouya Haratipour; Debbie C Crans; Boris A Kashemirov; Samuel H Wilson; Charles E McKenna; Myron F Goodman
Journal:  Biochemistry       Date:  2019-03-14       Impact factor: 3.162

3.  Ribonucleotide incorporation by human DNA polymerase η impacts translesion synthesis and RNase H2 activity.

Authors:  Elisa Mentegari; Emmanuele Crespan; Laura Bavagnoli; Miroslava Kissova; Federica Bertoletti; Simone Sabbioneda; Ralph Imhof; Shana J Sturla; Arman Nilforoushan; Ulrich Hübscher; Barbara van Loon; Giovanni Maga
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

4.  DNA polymerase δ-interacting protein 2 is a processivity factor for DNA polymerase λ during 8-oxo-7,8-dihydroguanine bypass.

Authors:  Giovanni Maga; Emmanuele Crespan; Enni Markkanen; Ralph Imhof; Antonia Furrer; Giuseppe Villani; Ulrich Hübscher; Barbara van Loon
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-04       Impact factor: 11.205

5.  Ubiquitin mediates the physical and functional interaction between human DNA polymerases η and ι.

Authors:  Justyna McIntyre; Antonio E Vidal; Mary P McLenigan; Martha G Bomar; Elena Curti; John P McDonald; Brian S Plosky; Eiji Ohashi; Roger Woodgate
Journal:  Nucleic Acids Res       Date:  2012-12-16       Impact factor: 16.971

6.  Handling the 3-methylcytosine lesion by six human DNA polymerases members of the B-, X- and Y-families.

Authors:  Antonia Furrer; Barbara van Loon
Journal:  Nucleic Acids Res       Date:  2013-10-04       Impact factor: 16.971

7.  The steric gate of DNA polymerase ι regulates ribonucleotide incorporation and deoxyribonucleotide fidelity.

Authors:  Katherine A Donigan; Mary P McLenigan; Wei Yang; Myron F Goodman; Roger Woodgate
Journal:  J Biol Chem       Date:  2014-02-14       Impact factor: 5.157

8.  Biochemical analysis of DNA polymerase η fidelity in the presence of replication protein A.

Authors:  Samuel C Suarez; Shannon M Toffton; Scott D McCulloch
Journal:  PLoS One       Date:  2014-05-13       Impact factor: 3.240

9.  DNA polymerase ι functions in the generation of tandem mutations during somatic hypermutation of antibody genes.

Authors:  Robert W Maul; Thomas MacCarthy; Ekaterina G Frank; Katherine A Donigan; Mary P McLenigan; William Yang; Huseyin Saribasak; Donald E Huston; Sabine S Lange; Roger Woodgate; Patricia J Gearhart
Journal:  J Exp Med       Date:  2016-07-25       Impact factor: 14.307

10.  Molecular architecture of the Ub-PCNA/Pol η complex bound to DNA.

Authors:  Wilson C Y Lau; Yinyin Li; Qinfen Zhang; Michael S Y Huen
Journal:  Sci Rep       Date:  2015-10-27       Impact factor: 4.379

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