Literature DB >> 2552436

UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

R Woodgate1, M Rajagopalan, C Lu, H Echols.   

Abstract

The introduction of a replication-inhibiting lesion into the DNA of Escherichia coli produces a marked elevation in mutation rate. The mutation pathway is a component of the induced, multigene SOS response. SOS mutagenesis is a tightly regulated process dependent on two RecA-mediated proteolytic events: cleavage of the LexA repressor to induce the UmuC and UmuD mutagenesis proteins, and cleavage of UmuD to UmuD' to activate the mutation pathway. To investigate the protein-protein interactions responsible for SOS mutagenesis, we have studied the interaction of UmuC, UmuD, and UmuD'. To probe intracellular interaction, we have used immunoprecipitation techniques with antibodies against UmuC or UmuD and UmuD'. We have found that antibody to UmuC precipitates UmuD' from cell extracts, and antibody to UmuD and UmuD' precipitates UmuC. Thus we conclude that UmuC probably associates tightly with UmuD' in cells. For biochemical studies, we have purified the UmuC and UmuD' proteins to use with the previously purified UmuD. UmuC associates strongly with an affinity column of UmuD and UmuD', eluting only under strongly dissociating conditions (2 M urea or 1.5 M KSCN). UmuC also associates efficiently with UmuD or UmuD' in solution, as judged by velocity sedimentation in a glycerol gradient. The likely stoichiometry is one UmuC with a dimeric UmuD or UmuD'. From these experiments and previous work, we infer that SOS mutagenesis depends on the action of the UmuC-UmuD' complex and probably RecA to rescue a stalled DNA polymerase III holoenzyme at the DNA lesion.

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Year:  1989        PMID: 2552436      PMCID: PMC298049          DOI: 10.1073/pnas.86.19.7301

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  DNA polymerase III of Escherichia coli is required for UV and ethyl methanesulfonate mutagenesis.

Authors:  M E Hagensee; T L Timme; S K Bryan; R E Moses
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

2.  Expression of human interferon genes in E. coli with the lambda PL promoter.

Authors:  R Crowl
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

3.  RecA protein and SOS. Correlation of mutagenesis phenotype with binding of mutant RecA proteins to duplex DNA and LexA cleavage.

Authors:  C Lu; H Echols
Journal:  J Mol Biol       Date:  1987-08-05       Impact factor: 5.469

4.  umuDC and mucAB operons whose products are required for UV light- and chemical-induced mutagenesis: UmuD, MucA, and LexA proteins share homology.

Authors:  K L Perry; S J Elledge; B B Mitchell; L Marsh; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

5.  Structural analysis of the umu operon required for inducible mutagenesis in Escherichia coli.

Authors:  Y Kitagawa; E Akaboshi; H Shinagawa; T Horii; H Ogawa; T Kato
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

6.  Lysine-156 and serine-119 are required for LexA repressor cleavage: a possible mechanism.

Authors:  S N Slilaty; J W Little
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

7.  Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes.

Authors:  P Matsudaira
Journal:  J Biol Chem       Date:  1987-07-25       Impact factor: 5.157

8.  Recovery from ultraviolet light-induced inhibition of DNA synthesis requires umuDC gene products in recA718 mutant strains but not in recA+ strains of Escherichia coli.

Authors:  E M Witkin; V Roegner-Maniscalco; J B Sweasy; J O McCall
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

9.  Intramolecular cleavage of LexA and phage lambda repressors: dependence of kinetics on repressor concentration, pH, temperature, and solvent.

Authors:  S N Slilaty; J A Rupley; J W Little
Journal:  Biochemistry       Date:  1986-11-04       Impact factor: 3.162

10.  Replication of UV-irradiated single-stranded DNA by DNA polymerase III holoenzyme of Escherichia coli: evidence for bypass of pyrimidine photodimers.

Authors:  Z Livneh
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

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  105 in total

1.  umuDC-mediated cold sensitivity is a manifestation of functions of the UmuD(2)C complex involved in a DNA damage checkpoint control.

Authors:  M D Sutton; G C Walker
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

2.  A phenotype for enigmatic DNA polymerase II: a pivotal role for pol II in replication restart in UV-irradiated Escherichia coli.

Authors:  S Rangarajan; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

3.  Physical interactions between DinI and RecA nucleoprotein filament for the regulation of SOS mutagenesis.

Authors:  T Yasuda; K Morimatsu; R Kato; J Usukura; M Takahashi; H Ohmori
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

Review 4.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

5.  Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

Authors:  M Torres; C Condon; J M Balada; C Squires; C L Squires
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

6.  Posttranslational modification of the umuD-encoded subunit of Escherichia coli DNA polymerase V regulates its interactions with the beta processivity clamp.

Authors:  Mark D Sutton; Issay Narumi; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

7.  Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).

Authors:  A E Ferentz; G C Walker; G Wagner
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

8.  Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Myron F Goodman; Mike O'Donnell
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

9.  Escherichia coli umuDC mutants: DNA sequence alterations and UmuD cleavage.

Authors:  W H Koch; D G Ennis; A S Levine; R Woodgate
Journal:  Mol Gen Genet       Date:  1992-06

10.  Two distinct modes of RecA action are required for DNA polymerase V-catalyzed translesion synthesis.

Authors:  Phuong Pham; Erica M Seitz; Sergei Saveliev; Xuan Shen; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

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