Literature DB >> 22827410

Identification of oxidized amino acid residues in the vicinity of the Mn(4)CaO(5) cluster of Photosystem II: implications for the identification of oxygen channels within the Photosystem.

Laurie K Frankel1, Larry Sallans, Patrick A Limbach, Terry M Bricker.   

Abstract

As a light-driven water-plastoquinone oxidoreductase, Photosystem II produces molecular oxygen as an enzymatic product. Additionally, under a variety of stress conditions, reactive oxygen species are produced at or near the active site for oxygen evolution. In this study, Fourier-transform ion cyclotron resonance mass spectrometry was used to identify oxidized amino acid residues located in several core Photosystem II proteins (D1, D2, CP43, and CP47) isolated from spinach Photosystem II membranes. While the majority of these oxidized residues (81%) are located on the oxygenated solvent-exposed surface of the complex, several residues on the CP43 protein ((354)E, (355)T, (356)M, and (357)R) which are in close proximity (<15 Å) to the Mn(4)CaO(5) active site are also modified. These residues appear to be associated with putative oxygen/reactive oxygen species exit channel(s) in the photosystem. These results are discussed within the context of a number of computational studies which have identified putative oxygen channels within the photosystem.

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Year:  2012        PMID: 22827410      PMCID: PMC3448023          DOI: 10.1021/bi300650n

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  46 in total

1.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

2.  The PsbP protein, but not the PsbQ protein, is required for normal thylakoid architecture in Arabidopsis thaliana.

Authors:  Xiaoping Yi; Stefan R Hargett; Laurie K Frankel; Terry M Bricker
Journal:  FEBS Lett       Date:  2009-06-03       Impact factor: 4.124

Review 3.  The extrinsic proteins of Photosystem II.

Authors:  Terry M Bricker; Johnna L Roose; Robert D Fagerlund; Laurie K Frankel; Julian J Eaton-Rye
Journal:  Biochim Biophys Acta       Date:  2011-07-21

4.  Probing oxygen activation sites in two flavoprotein oxidases using chloride as an oxygen surrogate.

Authors:  Phaneeswara-Rao Kommoju; Zhi-wei Chen; Robert C Bruckner; F Scott Mathews; Marilyn Schuman Jorns
Journal:  Biochemistry       Date:  2011-05-26       Impact factor: 3.162

5.  N-formylkynurenine as a marker of high light stress in photosynthesis.

Authors:  Tina M Dreaden; Jun Chen; Sascha Rexroth; Bridgette A Barry
Journal:  J Biol Chem       Date:  2011-04-28       Impact factor: 5.157

6.  Tracking the flow of water through photosystem II using molecular dynamics and streamline tracing.

Authors:  Serguei Vassiliev; Pascal Comte; Abdullah Mahboob; Doug Bruce
Journal:  Biochemistry       Date:  2010-03-09       Impact factor: 3.162

7.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

8.  Analysis of xenon binding to photosystem II by X-ray crystallography.

Authors:  J W Murray; K Maghlaoui; J Kargul; M Sugiura; J Barber
Journal:  Photosynth Res       Date:  2008-10-07       Impact factor: 3.573

9.  Probing the accessibility of the Mn(4)Ca cluster in photosystem II: channels calculation, noble gas derivatization, and cocrystallization with DMSO.

Authors:  Azat Gabdulkhakov; Albert Guskov; Matthias Broser; Jan Kern; Frank Müh; Wolfram Saenger; Athina Zouni
Journal:  Structure       Date:  2009-09-09       Impact factor: 5.006

Review 10.  Production of reactive oxygen species by photosystem II.

Authors:  Pavel Pospísil
Journal:  Biochim Biophys Acta       Date:  2009-05-20
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  19 in total

1.  Amino acid oxidation of the D1 and D2 proteins by oxygen radicals during photoinhibition of Photosystem II.

Authors:  Ravindra Kale; Annette E Hebert; Laurie K Frankel; Larry Sallans; Terry M Bricker; Pavel Pospíšil
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

2.  Radiolytic mapping of solvent-contact surfaces in Photosystem II of higher plants: experimental identification of putative water channels within the photosystem.

Authors:  Laurie K Frankel; Larry Sallans; Henry Bellamy; Jost S Goettert; Patrick A Limbach; Terry M Bricker
Journal:  J Biol Chem       Date:  2013-06-28       Impact factor: 5.157

3.  Use of protein cross-linking and radiolytic footprinting to elucidate PsbP and PsbQ interactions within higher plant Photosystem II.

Authors:  Manjula P Mummadisetti; Laurie K Frankel; Henry D Bellamy; Larry Sallans; Jost S Goettert; Michal Brylinski; Patrick A Limbach; Terry M Bricker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-27       Impact factor: 11.205

4.  X-ray radiation-induced addition of oxygen atoms to protein residues.

Authors:  Jimin Wang
Journal:  Protein Sci       Date:  2016-07-08       Impact factor: 6.725

5.  Mass spectrometry-based footprinting reveals structural dynamics of loop E of the chlorophyll-binding protein CP43 during photosystem II assembly in the cyanobacterium Synechocystis 6803.

Authors:  Haijun Liu; Jiawei Chen; Richard Y-C Huang; Daniel Weisz; Michael L Gross; Himadri B Pakrasi
Journal:  J Biol Chem       Date:  2013-04-01       Impact factor: 5.157

Review 6.  Reactive oxygen and oxidative stress: N-formyl kynurenine in photosystem II and non-photosynthetic proteins.

Authors:  Tina M Dreaden Kasson; Bridgette A Barry
Journal:  Photosynth Res       Date:  2012-11-16       Impact factor: 3.573

Review 7.  Reactive oxygen species in photosystem II: relevance for oxidative signaling.

Authors:  Pavel Pospíšil; Aditya Kumar; Ankush Prasad
Journal:  Photosynth Res       Date:  2022-05-28       Impact factor: 3.429

8.  Natively oxidized amino acid residues in the spinach cytochrome b 6 f complex.

Authors:  Ryan M Taylor; Larry Sallans; Laurie K Frankel; Terry M Bricker
Journal:  Photosynth Res       Date:  2018-01-29       Impact factor: 3.573

9.  Natively oxidized amino acid residues in the spinach PS I-LHC I supercomplex.

Authors:  Ravindra Kale; Larry Sallans; Laurie K Frankel; Terry M Bricker
Journal:  Photosynth Res       Date:  2020-01-01       Impact factor: 3.573

10.  Oxidized amino acid residues in the vicinity of Q(A) and Pheo(D1) of the photosystem II reaction center: putative generation sites of reducing-side reactive oxygen species.

Authors:  Laurie K Frankel; Larry Sallans; Patrick A Limbach; Terry M Bricker
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

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