Literature DB >> 22815445

Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7.

Céline Villeneuve1, Christine Martineau, Florian Mauffrey, Richard Villemur.   

Abstract

Methylophaga sp. strains JAM1 and JAM7 have been isolated from a denitrification system. Strain JAM1 was the first Methylophaga strain reported to be able to grow under denitrifying conditions. Here, we report the complete genome sequences of the two strains, which allowed prediction of gene clusters involved in denitrification in strain JAM1.

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Year:  2012        PMID: 22815445      PMCID: PMC3416558          DOI: 10.1128/JB.00726-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  9 in total

1.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

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Authors:  Rich Boden; Donovan P Kelly; J Colin Murrell; Hendrik Schäfer
Journal:  Environ Microbiol       Date:  2010-10       Impact factor: 5.491

3.  [Methylophaga murata sp. nov.: a haloalkaliphilic aerobic methylotroph from deteriorating marble].

Authors:  N V Doronina; Ts D Li; E G Ivanova; Iu A Trotsenko
Journal:  Mikrobiologiia       Date:  2005 Jul-Aug

4.  Dissimilatory reduction of nitrate in seawater by a Methylophaga strain containing two highly divergent narG sequences.

Authors:  Julie Auclair; François Lépine; Serge Parent; Richard Villemur
Journal:  ISME J       Date:  2010-04-15       Impact factor: 10.302

5.  Draft genome sequence of Methylophaga aminisulfidivorans MP T.

Authors:  Gui Hwan Han; Wonduck Kim; Jongsik Chun; Si Wouk Kim
Journal:  J Bacteriol       Date:  2011-06-17       Impact factor: 3.490

6.  Draft genome sequence of the chemolithoheterotrophic, halophilic methylotroph Methylophaga thiooxydans DMS010.

Authors:  Rich Boden; Steve Ferriera; Justin Johnson; Donovan P Kelly; J Colin Murrell; Hendrik Schäfer
Journal:  J Bacteriol       Date:  2011-04-08       Impact factor: 3.490

7.  Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater.

Authors:  Chakkiath Paul Antony; Nina V Doronina; Rich Boden; Yuri A Trotsenko; Yogesh S Shouche; J Colin Murrell
Journal:  Int J Syst Evol Microbiol       Date:  2011-09-02       Impact factor: 2.747

8.  Methylophaga aminisulfidivorans sp. nov., a restricted facultatively methylotrophic marine bacterium.

Authors:  Hee Gon Kim; Nina V Doronina; Yuri A Trotsenko; Si Wouk Kim
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

9.  Methylophaga alcalica sp. nov., a novel alkaliphilic and moderately halophilic, obligately methylotrophic bacterium from an East Mongolian saline soda lake.

Authors:  Nina V Doronina; Tsyregma D Darmaeva; Yuri A Trotsenko
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

  9 in total
  11 in total

1.  Phytoplankton-bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge.

Authors:  Erin M Bertrand; John P McCrow; Ahmed Moustafa; Hong Zheng; Jeffrey B McQuaid; Tom O Delmont; Anton F Post; Rachel E Sipler; Jenna L Spackeen; Kai Xu; Deborah A Bronk; David A Hutchins; Andrew E Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-28       Impact factor: 11.205

2.  Composition and variation of sediment bacterial and nirS-harboring bacterial communities at representative sites of the Bohai Gulf coastal zone, China.

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Journal:  World J Microbiol Biotechnol       Date:  2013-11-09       Impact factor: 3.312

3.  Comparative Analysis of Denitrifying Activities of Hyphomicrobium nitrativorans, Hyphomicrobium denitrificans, and Hyphomicrobium zavarzinii.

Authors:  Christine Martineau; Florian Mauffrey; Richard Villemur
Journal:  Appl Environ Microbiol       Date:  2015-05-15       Impact factor: 4.792

4.  Strain-level genetic diversity of Methylophaga nitratireducenticrescens confers plasticity to denitrification capacity in a methylotrophic marine denitrifying biofilm.

Authors:  Valérie Geoffroy; Geneviève Payette; Florian Mauffrey; Livie Lestin; Philippe Constant; Richard Villemur
Journal:  PeerJ       Date:  2018-04-23       Impact factor: 2.984

5.  Dynamics of a methanol-fed marine denitrifying biofilm: 1-Impact of environmental changes on the denitrification and the co-occurrence of Methylophaga nitratireducenticrescens and Hyphomicrobium nitrativorans.

Authors:  Geneviève Payette; Valérie Geoffroy; Christine Martineau; Richard Villemur
Journal:  PeerJ       Date:  2019-08-13       Impact factor: 2.984

6.  Dynamics of a methanol-fed marine denitrifying biofilm: 2-impact of environmental changes on the microbial community.

Authors:  Richard Villemur; Geneviève Payette; Valérie Geoffroy; Florian Mauffrey; Christine Martineau
Journal:  PeerJ       Date:  2019-08-13       Impact factor: 2.984

7.  Draft Genome Sequence of Methylophaga lonarensis MPLT, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph.

Authors:  Sudarshan A Shetty; Nachiket P Marathe; Hitendra Munot; Chakkiath Paul Antony; Dhiraj P Dhotre; J Colin Murrell; Yogesh S Shouche
Journal:  Genome Announc       Date:  2013-05-09

8.  Complete nucleotide sequence and analysis of two conjugative broad host range plasmids from a marine microbial biofilm.

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Journal:  PLoS One       Date:  2014-03-19       Impact factor: 3.240

9.  Microbial communities of deep-sea methane seeps at Hikurangi continental margin (New Zealand).

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Journal:  PLoS One       Date:  2013-09-30       Impact factor: 3.240

10.  A Novel Arsenate-Resistant Determinant Associated with ICEpMERPH, a Member of the SXT/R391 Group of Mobile Genetic Elements.

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Journal:  Genes (Basel)       Date:  2019-12-16       Impact factor: 4.096

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