Literature DB >> 24214680

Composition and variation of sediment bacterial and nirS-harboring bacterial communities at representative sites of the Bohai Gulf coastal zone, China.

Xiangyu Guan1, Lingling Zhu, Youxun Li, Yuxuan Xie, Mingzhang Zhao, Ximing Luo.   

Abstract

With rapid urbanization, anthropogenic activities are increasingly influencing the natural environment of the Bohai Bay. In this study, the composition and variation of bacterial and nirS-harboring bacterial communities in the coastal zone sediments of the Bohai Gulf were analyzed using PCR-based clone libraries. A total of 95 genera were detected in the bacterial communities, with Proteobacteria (72.1 %), Acidobacteria (10.5 %), Firmicutes (1.7 %), Bacteroidetes (1.4 %), Chloroflexi (0.7 %) and Planctomycetes (0.7 %) being the dominated phyla. The NirS sequences were divided into nine Clusters (A-I). Canonical correlation analysis showed that the bacterial or denitrifying communities were correlated with different environmental factors, such as total organic carbon, total nitrogen, ammonium, sulfate, etc. Furthermore, bacterial communities' composition and diversity are influenced by oil exploration, sewage discharge and other anthropogenic activities in the coastal area of the Bohai Sea. Thus, this study provided useful information on further research on regional or global environmental control and restore.

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Year:  2013        PMID: 24214680     DOI: 10.1007/s11274-013-1553-4

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  41 in total

1.  Microbial diversity in deep-sea sediment from the cobalt-rich crust deposit region in the Pacific Ocean.

Authors:  Li Liao; Xue-Wei Xu; Xia-Wei Jiang; Chun-Sheng Wang; Dong-Sheng Zhang; Jian-Yu Ni; Min Wu
Journal:  FEMS Microbiol Ecol       Date:  2011-09-15       Impact factor: 4.194

2.  Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness.

Authors:  Patrick D Schloss; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

3.  Phylogenetic analysis of Archaea in the deep-sea sediments of west Pacific Warm Pool.

Authors:  Peng Wang; Xiang Xiao; Fengping Wang
Journal:  Extremophiles       Date:  2005-03-11       Impact factor: 2.395

4.  Linking denitrifier community structure and prevalent biogeochemical parameters in the pelagial of the central Baltic Proper (Baltic Sea).

Authors:  Michael Hannig; Gesche Braker; Joachim Dippner; Klaus Jürgens
Journal:  FEMS Microbiol Ecol       Date:  2006-08       Impact factor: 4.194

5.  Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria.

Authors:  Cindy H Nakatsu; Krassimira Hristova; Satoshi Hanada; Xian-Ying Meng; Jessica R Hanson; Kate M Scow; Yoichi Kamagata
Journal:  Int J Syst Evol Microbiol       Date:  2006-05       Impact factor: 2.747

6.  Microbial population structures in the deep marine biosphere.

Authors:  Julie A Huber; David B Mark Welch; Hilary G Morrison; Susan M Huse; Phillip R Neal; David A Butterfield; Mitchell L Sogin
Journal:  Science       Date:  2007-10-05       Impact factor: 47.728

7.  Diversity and distribution of sediment nirS-encoding bacterial assemblages in response to environmental gradients in the eutrophied Jiaozhou Bay, China.

Authors:  Hongyue Dang; Chunyan Wang; Jing Li; Tiegang Li; Fang Tian; Wei Jin; Yongsheng Ding; Zhinan Zhang
Journal:  Microb Ecol       Date:  2008-11-19       Impact factor: 4.552

8.  Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway.

Authors:  Liz J Shaw; Graeme W Nicol; Zena Smith; Jon Fear; James I Prosser; Elizabeth M Baggs
Journal:  Environ Microbiol       Date:  2006-02       Impact factor: 5.491

9.  Biodegradation processes in a laboratory-scale groundwater contaminant plume assessed by fluorescence imaging and microbial analysis.

Authors:  Helen C Rees; Sascha E Oswald; Steven A Banwart; Roger W Pickup; David N Lerner
Journal:  Appl Environ Microbiol       Date:  2007-04-27       Impact factor: 4.792

10.  Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples.

Authors:  G Braker; A Fesefeldt; K P Witzel
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

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  1 in total

1.  Urbanization Altered Bacterial and Archaeal Composition in Tidal Freshwater Wetlands Near Washington DC, USA, and Buenos Aires, Argentina.

Authors:  Martina Gonzalez Mateu; Cedric Evan Park; Cullen Patrick McAskill; Andrew H Baldwin; Stephanie A Yarwood
Journal:  Microorganisms       Date:  2019-03-06
  1 in total

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