Literature DB >> 21478352

Draft genome sequence of the chemolithoheterotrophic, halophilic methylotroph Methylophaga thiooxydans DMS010.

Rich Boden1, Steve Ferriera, Justin Johnson, Donovan P Kelly, J Colin Murrell, Hendrik Schäfer.   

Abstract

Methylophaga thiooxydans is a mesophilic, obligately halophilic bacterium that is capable of methylotrophic growth on a range of one-carbon compounds as well as chemolithoheterotrophic growth at the expense of thiosulfate. Here we present the draft genome sequence of Methylophaga thiooxydans DMS010 (DSM 22068(T), VKM B2586(T)), the type strain of the species, which has allowed prediction of the genes involved in one-carbon metabolism, nitrogen metabolism, and other aspects of central metabolism.

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Year:  2011        PMID: 21478352      PMCID: PMC3133190          DOI: 10.1128/JB.00388-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  7 in total

Review 1.  A challenge for 21st century molecular biology and biochemistry: what are the causes of obligate autotrophy and methanotrophy?

Authors:  Ann P Wood; Jukka P Aurikko; Donovan P Kelly
Journal:  FEMS Microbiol Rev       Date:  2004-06       Impact factor: 16.408

2.  Oxidation of dimethylsulfide to tetrathionate by Methylophaga thiooxidans sp. nov.: a new link in the sulfur cycle.

Authors:  Rich Boden; Donovan P Kelly; J Colin Murrell; Hendrik Schäfer
Journal:  Environ Microbiol       Date:  2010-10       Impact factor: 5.491

3.  [Methylophaga murata sp. nov.: a haloalkaliphilic aerobic methylotroph from deteriorating marble].

Authors:  N V Doronina; Ts D Li; E G Ivanova; Iu A Trotsenko
Journal:  Mikrobiologiia       Date:  2005 Jul-Aug

4.  Isolation of Methylophaga spp. from marine dimethylsulfide-degrading enrichment cultures and identification of polypeptides induced during growth on dimethylsulfide.

Authors:  Hendrik Schäfer
Journal:  Appl Environ Microbiol       Date:  2007-02-23       Impact factor: 4.792

5.  Methylophaga aminisulfidivorans sp. nov., a restricted facultatively methylotrophic marine bacterium.

Authors:  Hee Gon Kim; Nina V Doronina; Yuri A Trotsenko; Si Wouk Kim
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

6.  Methylophaga alcalica sp. nov., a novel alkaliphilic and moderately halophilic, obligately methylotrophic bacterium from an East Mongolian saline soda lake.

Authors:  Nina V Doronina; Tsyregma D Darmaeva; Yuri A Trotsenko
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

7.  Methylophaga natronica sp. nov., a new alkaliphilic and moderately halophilic, restricted-facultatively methylotrophic bacterium from soda lake of the Southern Transbaikal region.

Authors:  Nina Doronina; Tsyregma Darmaeva; Yuri Trotsenko
Journal:  Syst Appl Microbiol       Date:  2003-09       Impact factor: 4.022

  7 in total
  6 in total

1.  Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill.

Authors:  Adam R Rivers; Shalabh Sharma; Susannah G Tringe; Jeffrey Martin; Samantha B Joye; Mary Ann Moran
Journal:  ISME J       Date:  2013-08-01       Impact factor: 10.302

2.  Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7.

Authors:  Céline Villeneuve; Christine Martineau; Florian Mauffrey; Richard Villemur
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

3.  Draft genome sequence of Methylophaga aminisulfidivorans MP T.

Authors:  Gui Hwan Han; Wonduck Kim; Jongsik Chun; Si Wouk Kim
Journal:  J Bacteriol       Date:  2011-06-17       Impact factor: 3.490

4.  Methylophaga and Hyphomicrobium can be used as target genera in monitoring saline water methanol-utilizing denitrification.

Authors:  Antti J Rissanen; Anne Ojala; Markus Dernjatin; Jouni Jaakkola; Marja Tiirola
Journal:  J Ind Microbiol Biotechnol       Date:  2016-10-01       Impact factor: 3.346

5.  Identification of Proteins and Genes Expressed by Methylophaga thiooxydans During Growth on Dimethylsulfide and Their Presence in Other Members of the Genus.

Authors:  Eileen Kröber; Hendrik Schäfer
Journal:  Front Microbiol       Date:  2019-05-29       Impact factor: 5.640

6.  Draft Genome Sequence of Methylophaga lonarensis MPLT, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph.

Authors:  Sudarshan A Shetty; Nachiket P Marathe; Hitendra Munot; Chakkiath Paul Antony; Dhiraj P Dhotre; J Colin Murrell; Yogesh S Shouche
Journal:  Genome Announc       Date:  2013-05-09
  6 in total

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