Literature DB >> 22802657

Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis.

Guodong Ren1, Meng Xie, Yongchao Dou, Shuxin Zhang, Chi Zhang, Bin Yu.   

Abstract

MicroRNAs (miRNAs) are regulators of gene expression in plants and animals. The biogenesis of miRNAs is precisely controlled to secure normal development of organisms. Here we report that TOUGH (TGH) is a component of the DCL1-HYL1-SERRATE complex that processes primary transcripts of miRNAs [i.e., primary miRNAs (pri-miRNAs)] into miRNAs in Arabidopsis. Lack of TGH impairs multiple DCL activities in vitro and reduces the accumulation of miRNAs and siRNAs in vivo. TGH is an RNA-binding protein, binds pri-miRNAs and precursor miRNAs in vivo, and contributes to pri-miRNA-HYL1 interaction. These results indicate that TGH might regulate abundance of miRNAs through promoting DCL1 cleavage efficiency and/or recruitment of pri-miRNAs.

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Year:  2012        PMID: 22802657      PMCID: PMC3412041          DOI: 10.1073/pnas.1204915109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

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Authors:  David P Bartel
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3.  Biochemical specialization within Arabidopsis RNA silencing pathways.

Authors:  Yijun Qi; Ahmet M Denli; Gregory J Hannon
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4.  The helicase and RNaseIIIa domains of Arabidopsis Dicer-Like1 modulate catalytic parameters during microRNA biogenesis.

Authors:  Chenggang Liu; Michael J Axtell; Nina V Fedoroff
Journal:  Plant Physiol       Date:  2012-04-03       Impact factor: 8.340

5.  An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis.

Authors:  V Hugouvieux; J M Kwak; J I Schroeder
Journal:  Cell       Date:  2001-08-24       Impact factor: 41.582

6.  A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin.

Authors:  C Lu; N Fedoroff
Journal:  Plant Cell       Date:  2000-12       Impact factor: 11.277

7.  The evolutionarily conserved TOUGH protein is required for proper development of Arabidopsis thaliana.

Authors:  Luz I A Calderon-Villalobos; Carola Kuhnle; Esther M N Dohmann; Hanbing Li; Mike Bevan; Claus Schwechheimer
Journal:  Plant Cell       Date:  2005-07-15       Impact factor: 11.277

8.  Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

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Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

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Authors:  S E Jacobsen; M P Running; E M Meyerowitz
Journal:  Development       Date:  1999-12       Impact factor: 6.868

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  76 in total

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2.  CDC5, a DNA binding protein, positively regulates posttranscriptional processing and/or transcription of primary microRNA transcripts.

Authors:  Shuxin Zhang; Meng Xie; Guodong Ren; Bin Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

Review 3.  The crosstalk between plant microRNA biogenesis factors and the spliceosome.

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Journal:  Plant Signal Behav       Date:  2013-12-03

Review 4.  Regulation of pri-MIRNA processing: mechanistic insights into the miRNA homeostasis in plant.

Authors:  Jayanti Jodder
Journal:  Plant Cell Rep       Date:  2021-01-16       Impact factor: 4.570

Review 5.  Messages on small RNA duplexes in plants.

Authors:  Taichiro Iki
Journal:  J Plant Res       Date:  2016-11-23       Impact factor: 2.629

Review 6.  Post-transcriptional control of miRNA abundance in Arabidopsis.

Authors:  Guodong Ren; Bin Yu
Journal:  Plant Signal Behav       Date:  2012-09-07

7.  A role for the RNA-binding protein MOS2 in microRNA maturation in Arabidopsis.

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8.  Hyponastic Leaves 1 protects pri-miRNAs from nuclear exosome attack.

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-07       Impact factor: 11.205

9.  KH domain protein RCF3 is a tissue-biased regulator of the plant miRNA biogenesis cofactor HYL1.

Authors:  Patricia Karlsson; Michael Danger Christie; Danelle K Seymour; Huan Wang; Xi Wang; Jörg Hagmann; Franceli Kulcheski; Pablo Andrés Manavella
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-28       Impact factor: 11.205

10.  NOT2 proteins promote polymerase II-dependent transcription and interact with multiple MicroRNA biogenesis factors in Arabidopsis.

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Journal:  Plant Cell       Date:  2013-02-19       Impact factor: 11.277

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