Literature DB >> 22798935

4-(Prop-2-yn-1-yl-oxy)benzene-1,2-dicarbonitrile.

Yee Jan Chin, Ai Ling Tan, Franz L Wimmer, Aminul Huq Mirza, David J Young, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(11)H(6)N(2)O, the complete mol-ecule is generated by the application of crystallographic twofold symmetry (the mol-ecule is disordered about this axis). The prop-2-yn-1-yl residue is slightly twisted out of the plane of the benzene ring [C-O-C-C torsion angle = 173.1 (3)°] and is orientated away from the nitrile substituents. In the crystal, supra-molecular chains along the a axis, arising from C-H⋯N inter-actions, are connected into stacks along the c axis by π-π inter-actions between the benzene rings [centroid-centroid distance = 3.6978 (6) Å = length of the c axis].

Entities:  

Year:  2012        PMID: 22798935      PMCID: PMC3394070          DOI: 10.1107/S1600536812028309

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the solubilization and some applications of phthanocyanine dyes, see: Jiang et al. (2011 ▶); Sleven et al. (2001 ▶). For the synthesis of substituted phthalonitriles, see: Wöhrle et al. (1993 ▶); Wu et al. (1998 ▶); Li & Lieberman (2001 ▶); Sleven et al. (2001 ▶); Li et al. (2008 ▶); Seven et al. (2009 ▶); Foo et al. (2012 ▶).

Experimental

Crystal data

C11H6N2O M = 182.18 Monoclinic, a = 11.4809 (9) Å b = 22.2091 (16) Å c = 3.6978 (6) Å β = 91.304 (10)° V = 942.62 (18) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.15 × 0.05 × 0.05 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.792, T max = 1.000 3258 measured reflections 1114 independent reflections 840 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.163 S = 1.08 1114 reflections 86 parameters 12 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812028309/hb6862sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028309/hb6862Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812028309/hb6862Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H6N2OF(000) = 376
Mr = 182.18Dx = 1.284 Mg m3
Monoclinic, C2/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yCell parameters from 938 reflections
a = 11.4809 (9) Åθ = 3.3–27.5°
b = 22.2091 (16) ŵ = 0.09 mm1
c = 3.6978 (6) ÅT = 100 K
β = 91.304 (10)°Prism, colourless
V = 942.62 (18) Å30.15 × 0.05 × 0.05 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector1114 independent reflections
Radiation source: fine-focus sealed tube840 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.038
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 3.3°
ω scanh = −14→14
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −26→28
Tmin = 0.792, Tmax = 1.000l = −4→4
3258 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.163H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0718P)2 + 0.8054P] where P = (Fo2 + 2Fc2)/3
1114 reflections(Δ/σ)max < 0.001
86 parametersΔρmax = 0.41 e Å3
12 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.1308 (2)0.45076 (11)0.1768 (8)0.0273 (7)0.50
N10.15188 (16)0.19174 (9)0.2675 (6)0.0376 (6)
C10.10982 (16)0.23658 (9)0.1829 (6)0.0260 (5)
C20.05529 (16)0.29272 (8)0.0857 (5)0.0219 (5)
C30.1103 (2)0.34676 (10)0.1663 (6)0.0349 (6)
H30.18530.34690.28010.042*
C40.0555 (3)0.40028 (10)0.0803 (7)0.0446 (7)
H40.09360.43740.13090.054*0.50
C50.2499 (3)0.44609 (17)0.3108 (13)0.0274 (10)0.50
H5A0.29620.42110.14580.033*0.50
H5B0.25220.42720.55350.033*0.50
C60.2980 (3)0.5082 (7)0.3303 (12)0.030 (3)0.50
C70.3440 (4)0.5544 (2)0.3459 (17)0.0463 (14)0.50
H70.386 (5)0.595 (3)0.363 (16)0.054 (16)*0.50
U11U22U33U12U13U23
O10.0258 (13)0.0187 (12)0.0370 (15)0.0001 (10)−0.0069 (11)−0.0008 (11)
N10.0332 (10)0.0410 (11)0.0383 (12)0.0126 (9)−0.0029 (8)0.0074 (9)
C10.0191 (9)0.0345 (12)0.0242 (11)−0.0003 (8)−0.0019 (8)0.0004 (8)
C20.0206 (10)0.0234 (10)0.0217 (10)−0.0009 (7)−0.0001 (8)−0.0007 (7)
C30.0401 (12)0.0399 (13)0.0251 (12)−0.0182 (10)0.0071 (9)−0.0077 (9)
C40.0728 (15)0.0262 (10)0.0355 (13)−0.0161 (10)0.0172 (11)−0.0063 (9)
C50.0220 (19)0.0167 (19)0.043 (3)0.0005 (17)−0.0104 (17)−0.0001 (16)
C60.0262 (16)0.013 (9)0.051 (2)−0.004 (2)−0.0130 (15)−0.001 (2)
C70.033 (3)0.027 (2)0.078 (4)0.001 (2)−0.019 (2)−0.001 (2)
O1—C51.447 (5)C4—C4i1.393 (6)
O1—C41.455 (3)C4—H40.9500
N1—C11.147 (3)C5—C61.487 (14)
C1—C21.437 (3)C5—H5A0.9900
C2—C31.385 (3)C5—H5B0.9900
C2—C2i1.406 (4)C6—C71.155 (16)
C3—C41.379 (3)C7—H71.02 (6)
C3—H30.9500
C5—O1—C4125.5 (3)C3—C4—H4119.8
N1—C1—C2178.4 (2)C4i—C4—H4119.8
C3—C2—C2i119.96 (13)O1—C5—C6107.3 (3)
C3—C2—C1120.26 (18)O1—C5—H5A110.3
C2i—C2—C1119.77 (10)C6—C5—H5A110.3
C4—C3—C2119.6 (2)O1—C5—H5B110.3
C4—C3—H3120.2C6—C5—H5B110.3
C2—C3—H3120.2H5A—C5—H5B108.5
C3—C4—C4i120.43 (14)C7—C6—C5174.6 (7)
C3—C4—O1110.0 (2)C6—C7—H7178 (3)
C4i—C4—O1129.56 (15)
C2i—C2—C3—C40.6 (4)C5—O1—C4—C35.5 (5)
C1—C2—C3—C4−178.2 (2)C5—O1—C4—C4i−173.5 (4)
C2—C3—C4—C4i1.2 (4)C4—O1—C5—C6173.1 (3)
C2—C3—C4—O1−177.9 (2)
D—H···AD—HH···AD···AD—H···A
C3—H3···N1ii0.952.623.509 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯N1i 0.952.623.509 (3)155

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Phthalocyanine-polyamine conjugates as highly efficient photosensitizers for photodynamic therapy.

Authors:  Xiong-Jie Jiang; Sin-Lui Yeung; Pui-Chi Lo; Wing-Ping Fong; Dennis K P Ng
Journal:  J Med Chem       Date:  2010-12-07       Impact factor: 7.446

3.  Syntheses and properties of a series of cationic water-soluble phthalocyanines.

Authors:  Hairong Li; Timothy J Jensen; Frank R Fronczek; M Graça H Vicente
Journal:  J Med Chem       Date:  2008-01-12       Impact factor: 7.446

4.  4,5-Diphen-oxy-benzene-1,2-dicarbo-nitrile.

Authors:  Chuan Ching Foo; Ai Ling Tan; Franz L Wimmer; Aminul Huq Mirza; David J Young; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04
  4 in total
  4 in total

1.  Photophysicochemical, calf thymus DNA binding and in vitro photocytotoxicity properties of tetra-morpholinoethoxy-substituted phthalocyanines and their water-soluble quaternized derivatives.

Authors:  Halit Koçan; Kerem Kaya; İbrahim Özçeşmeci; B Şebnem Sesalan; Meltem Göksel; Mahmut Durmuş; Ayfer Kalkan Burat
Journal:  J Biol Inorg Chem       Date:  2017-10-19       Impact factor: 3.358

2.  4-Nitro-phthalo-nitrile.

Authors:  Chin Yee Jan; Norzianah Binti Haji Shamsudin; Ai Ling Tan; David J Young; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-22

3.  4-Nitro-phthalamide.

Authors:  Chin Yee Jan; Norzianah Binti Haji Shamsudin; Ai Ling Tan; David J Young; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-15

4.  3-(Prop-2-yn-1-yl-oxy)phthalo-nitrile.

Authors:  Chin Yee Jan; Norzianah Binti Haji Shamsudin; Ai Ling Tan; David J Young; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-06-12
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.