Literature DB >> 24765000

4-Nitro-phthalamide.

Chin Yee Jan1, Norzianah Binti Haji Shamsudin1, Ai Ling Tan1, David J Young1, Seik Weng Ng2, Edward R T Tiekink3.   

Abstract

In the title compound, C8H7N3O4 (systematic name: 4-nitro-benzene-1,2-dicarboxamide), each of the substituents is twisted out of the plane of the benzene ring to which it is attached [dihedral angles of 11.36 (2)° for the nitro group, and 60.89 (6) and 34.39 (6)° for the amide groups]. The amide groups are orientated to either side of the least-squares plane through the benzene ring with the amine groups being directed furthest apart. In the crystal, a three-dimensional architecture is established by a network of N-H⋯O hydrogen bonds.

Entities:  

Year:  2014        PMID: 24765000      PMCID: PMC3998509          DOI: 10.1107/S1600536814002955

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the synthesis of functional phthalocyanines, see: Chin et al. (2012 ▶). For the structure of the 1,2-dicarboxamide derivative, see: Hamada et al. (2012 ▶). For the synthesis, see: Rasmussen et al. (1978 ▶).

Experimental

Crystal data

C8H7N3O4 M = 209.17 Monoclinic, a = 7.7425 (2) Å b = 9.6634 (2) Å c = 12.1276 (3) Å β = 106.008 (3)° V = 872.19 (4) Å3 Z = 4 Cu Kα radiation μ = 1.13 mm−1 T = 100 K 0.40 × 0.30 × 0.20 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013 ▶) T min = 0.668, T max = 1.000 7908 measured reflections 1821 independent reflections 1748 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.090 S = 1.03 1821 reflections 164 parameters 4 restraints All H-atom parameters refined Δρmax = 0.33 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CrysAlis PRO (Agilent, 2013 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) general, I. DOI: 10.1107/S1600536814002955/hg5382sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814002955/hg5382Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814002955/hg5382Isup3.cml CCDC reference: 985960 Additional supporting information: crystallographic information; 3D view; checkCIF report
C8H7N3O4F(000) = 432
Mr = 209.17Dx = 1.593 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 4480 reflections
a = 7.7425 (2) Åθ = 3.8–76.2°
b = 9.6634 (2) ŵ = 1.13 mm1
c = 12.1276 (3) ÅT = 100 K
β = 106.008 (3)°Prism, colourless
V = 872.19 (4) Å30.40 × 0.30 × 0.20 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector1821 independent reflections
Radiation source: SuperNova (Cu) X-ray Source1748 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.029
Detector resolution: 10.4041 pixels mm-1θmax = 76.4°, θmin = 6.0°
ω scanh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013)k = −11→12
Tmin = 0.668, Tmax = 1.000l = −14→15
7908 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090All H-atom parameters refined
S = 1.03w = 1/[σ2(Fo2) + (0.0552P)2 + 0.2944P] where P = (Fo2 + 2Fc2)/3
1821 reflections(Δ/σ)max < 0.001
164 parametersΔρmax = 0.33 e Å3
4 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.61481 (11)0.80745 (8)0.55898 (7)0.0202 (2)
O20.54207 (13)0.79742 (9)0.37347 (8)0.0266 (2)
O31.04596 (10)0.17952 (8)0.51619 (7)0.0160 (2)
O40.91323 (12)0.23508 (8)0.72189 (7)0.0192 (2)
N10.60572 (12)0.74606 (10)0.46837 (8)0.0177 (2)
N20.76591 (13)0.09066 (10)0.45344 (8)0.0171 (2)
H210.6511 (13)0.1037 (17)0.4443 (14)0.025 (4)*
H220.809 (2)0.0070 (11)0.4535 (14)0.025 (4)*
N31.04060 (14)0.44255 (10)0.77908 (8)0.0182 (2)
H311.096 (2)0.4063 (17)0.8462 (10)0.027 (4)*
H321.050 (2)0.5306 (10)0.7667 (13)0.025 (4)*
C10.67444 (14)0.60364 (11)0.47498 (10)0.0154 (2)
C20.63660 (14)0.52513 (12)0.37619 (10)0.0171 (2)
H20.566 (2)0.5640 (18)0.3011 (14)0.030 (4)*
C30.70007 (15)0.38986 (12)0.38425 (10)0.0164 (2)
H30.677 (2)0.3367 (15)0.3164 (13)0.018 (3)*
C40.80132 (14)0.33683 (11)0.48911 (9)0.0141 (2)
C50.83839 (14)0.41940 (11)0.58825 (9)0.0137 (2)
C60.77318 (15)0.55445 (11)0.58101 (10)0.0150 (2)
H60.795 (2)0.6102 (16)0.6473 (13)0.019 (3)*
C70.88135 (15)0.19421 (11)0.49017 (9)0.0137 (2)
C80.93594 (14)0.35831 (11)0.70270 (9)0.0146 (2)
U11U22U33U12U13U23
O10.0180 (4)0.0139 (4)0.0287 (5)0.0015 (3)0.0063 (3)−0.0027 (3)
O20.0284 (5)0.0171 (4)0.0269 (5)0.0051 (3)−0.0047 (4)0.0061 (3)
O30.0152 (4)0.0130 (4)0.0202 (4)0.0004 (3)0.0053 (3)−0.0006 (3)
O40.0283 (4)0.0105 (4)0.0193 (4)0.0000 (3)0.0076 (3)0.0020 (3)
N10.0128 (4)0.0128 (5)0.0258 (5)−0.0002 (3)0.0024 (4)0.0013 (4)
N20.0153 (5)0.0111 (5)0.0246 (5)0.0009 (4)0.0049 (4)−0.0017 (4)
N30.0265 (5)0.0115 (5)0.0147 (5)−0.0005 (4)0.0021 (4)0.0017 (3)
C10.0135 (5)0.0105 (5)0.0221 (6)0.0003 (4)0.0050 (4)0.0024 (4)
C20.0148 (5)0.0169 (5)0.0187 (5)0.0003 (4)0.0032 (4)0.0029 (4)
C30.0170 (5)0.0149 (5)0.0170 (5)−0.0009 (4)0.0045 (4)−0.0012 (4)
C40.0136 (5)0.0109 (5)0.0185 (5)−0.0012 (4)0.0057 (4)0.0003 (4)
C50.0138 (5)0.0113 (5)0.0167 (5)−0.0008 (4)0.0053 (4)0.0012 (4)
C60.0157 (5)0.0118 (5)0.0180 (5)−0.0017 (4)0.0058 (4)−0.0011 (4)
C70.0177 (5)0.0118 (5)0.0124 (5)0.0002 (4)0.0055 (4)−0.0002 (4)
C80.0177 (5)0.0112 (5)0.0161 (5)0.0018 (4)0.0069 (4)−0.0002 (4)
O1—N11.2336 (13)C1—C21.3796 (16)
O2—N11.2252 (13)C1—C61.3862 (15)
O3—C71.2338 (14)C2—C31.3904 (16)
O4—C81.2351 (14)C2—H20.997 (16)
N1—C11.4698 (14)C3—C41.3945 (15)
N2—C71.3338 (14)C3—H30.945 (15)
N2—H210.874 (9)C4—C51.4050 (15)
N2—H220.875 (9)C4—C71.5097 (14)
N3—C81.3280 (15)C5—C61.3934 (15)
N3—H310.881 (9)C5—C81.5058 (14)
N3—H320.870 (9)C6—H60.943 (16)
O2—N1—O1123.47 (10)C4—C3—H3121.1 (9)
O2—N1—C1118.45 (10)C3—C4—C5120.16 (10)
O1—N1—C1118.09 (9)C3—C4—C7118.00 (9)
C7—N2—H21119.9 (11)C5—C4—C7121.64 (9)
C7—N2—H22118.1 (11)C6—C5—C4119.54 (10)
H21—N2—H22120.6 (15)C6—C5—C8120.41 (10)
C8—N3—H31116.6 (11)C4—C5—C8119.89 (9)
C8—N3—H32122.9 (10)C1—C6—C5118.50 (10)
H31—N3—H32120.4 (15)C1—C6—H6121.1 (9)
C2—C1—C6123.21 (10)C5—C6—H6120.4 (9)
C2—C1—N1118.72 (10)O3—C7—N2123.29 (10)
C6—C1—N1118.06 (10)O3—C7—C4119.99 (9)
C1—C2—C3118.01 (10)N2—C7—C4116.51 (9)
C1—C2—H2121.2 (10)O4—C8—N3123.42 (10)
C3—C2—H2120.8 (10)O4—C8—C5119.37 (10)
C2—C3—C4120.57 (10)N3—C8—C5117.20 (9)
C2—C3—H3118.2 (9)
O2—N1—C1—C2−11.31 (15)C2—C1—C6—C50.37 (17)
O1—N1—C1—C2168.48 (10)N1—C1—C6—C5179.78 (9)
O2—N1—C1—C6169.25 (10)C4—C5—C6—C1−0.61 (16)
O1—N1—C1—C6−10.96 (15)C8—C5—C6—C1−176.01 (10)
C6—C1—C2—C30.44 (17)C3—C4—C7—O3114.92 (12)
N1—C1—C2—C3−178.96 (10)C5—C4—C7—O3−60.00 (14)
C1—C2—C3—C4−1.02 (16)C3—C4—C7—N2−60.02 (13)
C2—C3—C4—C50.79 (16)C5—C4—C7—N2125.05 (11)
C2—C3—C4—C7−174.21 (10)C6—C5—C8—O4142.80 (11)
C3—C4—C5—C60.05 (16)C4—C5—C8—O4−32.58 (15)
C7—C4—C5—C6174.86 (9)C6—C5—C8—N3−35.96 (14)
C3—C4—C5—C8175.47 (10)C4—C5—C8—N3148.66 (11)
C7—C4—C5—C8−9.71 (15)
D—H···AD—HH···AD···AD—H···A
N2—H21···O1i0.87 (1)2.22 (1)3.0718 (13)164 (2)
N2—H22···O3ii0.88 (1)2.10 (1)2.9628 (12)168 (2)
N3—H31···O1iii0.88 (1)2.42 (1)3.1288 (13)138 (1)
N3—H31···O3iv0.88 (1)2.35 (1)3.0979 (12)143 (1)
N3—H32···O4v0.87 (1)2.00 (1)2.8498 (13)167 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H21⋯O1i 0.87 (1)2.22 (1)3.0718 (13)164 (2)
N2—H22⋯O3ii 0.88 (1)2.10 (1)2.9628 (12)168 (2)
N3—H31⋯O1iii 0.88 (1)2.42 (1)3.1288 (13)138 (1)
N3—H31⋯O3iv 0.88 (1)2.35 (1)3.0979 (12)143 (1)
N3—H32⋯O4v 0.87 (1)2.00 (1)2.8498 (13)167 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Pyrrolidinylideneureas, a new class of central nervous system agents.

Authors:  C R Rasmussen; J F Gardocki; J N Plampin; B L Twardzik; B E Reynolds; A J Molinari; N Schwartz; W W Bennetts; B E Price; J Marakowski
Journal:  J Med Chem       Date:  1978-10       Impact factor: 7.446

3.  N,N,N',N'-Tetra-methyl-phthalamide.

Authors:  Adel Hamada; Yamina Boudinar; Adel Beghidja; Mehdi Boutebdja
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-15

4.  4-(Prop-2-yn-1-yl-oxy)benzene-1,2-dicarbonitrile.

Authors:  Yee Jan Chin; Ai Ling Tan; Franz L Wimmer; Aminul Huq Mirza; David J Young; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-30
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.