Literature DB >> 24765021

4-Nitro-phthalo-nitrile.

Chin Yee Jan1, Norzianah Binti Haji Shamsudin1, Ai Ling Tan1, David J Young1, Seik Weng Ng2, Edward R T Tiekink3.   

Abstract

In the title compound, C8H3N3O2 (systematic name: 4-nitro-benzene-1,2-dicarbo-nitrile), the nitro group is twisted out of the plane of the benzene ring to which it is attached [O-N-Cring-Cring torsion angle = 9.80 (13)°]. In the crystal packing, supra-molecular layers with a zigzag topology in the ac plane are sustained by C-H⋯N inter-actions.

Entities:  

Year:  2014        PMID: 24765021      PMCID: PMC3998506          DOI: 10.1107/S1600536814003468

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the synthesis of functional phthalocyanines, see: Chin et al. (2012 ▶). For a related structure, see: Lin et al. (2006 ▶). For the synthesis, see: Rasmussen et al. (1978 ▶).

Experimental

Crystal data

C8H3N3O2 M = 173.13 Orthorhombic, a = 12.8642 (3) Å b = 9.2013 (2) Å c = 13.2578 (3) Å V = 1569.29 (6) Å3 Z = 8 Cu Kα radiation μ = 0.94 mm−1 T = 100 K 0.35 × 0.30 × 0.25 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013 ▶) T min = 0.626, T max = 1.000 7104 measured reflections 1638 independent reflections 1556 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.088 S = 1.10 1638 reflections 130 parameters All H-atom parameters refined Δρmax = 0.21 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2013 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) general, I. DOI: 10.1107/S1600536814003468/wm5005sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814003468/wm5005Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814003468/wm5005Isup3.cml CCDC reference: 987296 Additional supporting information: crystallographic information; 3D view; checkCIF report
C8H3N3O2F(000) = 704
Mr = 173.13Dx = 1.466 Mg m3
Orthorhombic, PbcaCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ac 2abCell parameters from 4240 reflections
a = 12.8642 (3) Åθ = 3.3–76.1°
b = 9.2013 (2) ŵ = 0.94 mm1
c = 13.2578 (3) ÅT = 100 K
V = 1569.29 (6) Å3Prism, colourless
Z = 80.35 × 0.30 × 0.25 mm
Agilent SuperNova Dual diffractometer with an Atlas detector1638 independent reflections
Radiation source: SuperNova (Cu) X-ray Source1556 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.016
Detector resolution: 10.4041 pixels mm-1θmax = 76.3°, θmin = 6.7°
ω scanh = −8→16
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013)k = −10→11
Tmin = 0.626, Tmax = 1.000l = −16→16
7104 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088All H-atom parameters refined
S = 1.10w = 1/[σ2(Fo2) + (0.0522P)2 + 0.3777P] where P = (Fo2 + 2Fc2)/3
1638 reflections(Δ/σ)max < 0.001
130 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.55783 (6)0.56540 (8)0.23140 (6)0.0224 (2)
O20.41285 (6)0.62811 (9)0.16017 (6)0.0284 (2)
N10.46305 (7)0.56035 (9)0.22296 (6)0.0185 (2)
N20.49465 (7)0.20831 (10)0.59515 (7)0.0245 (2)
N30.20184 (7)0.10850 (10)0.54001 (7)0.0214 (2)
C10.40488 (7)0.46610 (10)0.29308 (7)0.0159 (2)
C20.30038 (8)0.44112 (11)0.27448 (7)0.0185 (2)
C30.24639 (7)0.34933 (11)0.33907 (7)0.0183 (2)
C40.29752 (7)0.28688 (10)0.42094 (7)0.0158 (2)
C50.40307 (7)0.31687 (10)0.43884 (7)0.0152 (2)
C60.45807 (7)0.40675 (10)0.37365 (7)0.0156 (2)
C70.45469 (7)0.25464 (10)0.52497 (7)0.0176 (2)
C80.24319 (7)0.18890 (10)0.48760 (7)0.0173 (2)
H20.2670 (11)0.4827 (16)0.2163 (10)0.027 (3)*
H30.1745 (11)0.3317 (13)0.3282 (9)0.020 (3)*
H60.5294 (10)0.4254 (13)0.3839 (9)0.017 (3)*
U11U22U33U12U13U23
O10.0156 (4)0.0246 (4)0.0271 (4)−0.0022 (3)0.0032 (3)0.0031 (3)
O20.0248 (4)0.0300 (4)0.0304 (4)−0.0019 (3)−0.0029 (3)0.0151 (3)
N10.0177 (4)0.0174 (4)0.0204 (4)−0.0004 (3)0.0013 (3)0.0015 (3)
N20.0198 (4)0.0303 (5)0.0235 (5)0.0001 (3)−0.0016 (3)0.0064 (4)
N30.0183 (4)0.0241 (4)0.0217 (4)−0.0026 (3)0.0008 (3)0.0014 (3)
C10.0166 (5)0.0145 (4)0.0167 (5)0.0002 (3)0.0030 (3)−0.0003 (3)
C20.0176 (5)0.0204 (5)0.0174 (5)0.0014 (3)−0.0017 (3)0.0002 (4)
C30.0132 (5)0.0219 (5)0.0199 (5)−0.0009 (3)−0.0010 (3)−0.0005 (4)
C40.0155 (4)0.0152 (4)0.0166 (4)−0.0002 (3)0.0021 (3)−0.0022 (3)
C50.0152 (4)0.0144 (4)0.0159 (4)0.0021 (3)−0.0001 (3)−0.0020 (3)
C60.0125 (4)0.0153 (4)0.0190 (5)0.0005 (3)0.0006 (3)−0.0021 (4)
C70.0135 (4)0.0185 (5)0.0208 (5)−0.0015 (3)0.0019 (3)0.0000 (4)
C80.0139 (4)0.0196 (5)0.0184 (4)0.0002 (3)−0.0014 (3)−0.0023 (4)
O1—N11.2252 (12)C2—H20.962 (14)
O2—N11.2243 (11)C3—C41.3932 (13)
N1—C11.4752 (12)C3—H30.949 (13)
N2—C71.1453 (13)C4—C51.4057 (13)
N3—C81.1459 (13)C4—C81.4431 (13)
C1—C61.3811 (14)C5—C61.3898 (13)
C1—C21.3859 (14)C5—C71.4397 (13)
C2—C31.3889 (14)C6—H60.943 (13)
O2—N1—O1124.59 (8)C3—C4—C5120.44 (9)
O2—N1—C1117.40 (8)C3—C4—C8120.41 (8)
O1—N1—C1118.01 (8)C5—C4—C8119.15 (8)
C6—C1—C2123.54 (9)C6—C5—C4120.23 (9)
C6—C1—N1117.94 (8)C6—C5—C7119.68 (8)
C2—C1—N1118.52 (9)C4—C5—C7120.09 (8)
C1—C2—C3118.44 (9)C1—C6—C5117.66 (9)
C1—C2—H2120.7 (8)C1—C6—H6121.4 (8)
C3—C2—H2120.8 (8)C5—C6—H6120.9 (8)
C2—C3—C4119.67 (9)N2—C7—C5178.04 (11)
C2—C3—H3119.8 (8)N3—C8—C4178.30 (10)
C4—C3—H3120.5 (8)
O2—N1—C1—C6−170.25 (9)C3—C4—C5—C7178.52 (9)
O1—N1—C1—C69.80 (13)C8—C4—C5—C7−2.37 (13)
O2—N1—C1—C210.12 (13)C2—C1—C6—C50.25 (14)
O1—N1—C1—C2−169.82 (9)N1—C1—C6—C5−179.36 (8)
C6—C1—C2—C3−1.26 (15)C4—C5—C6—C11.09 (14)
N1—C1—C2—C3178.34 (8)C7—C5—C6—C1−178.85 (8)
C1—C2—C3—C40.91 (15)C6—C5—C7—N296 (3)
C2—C3—C4—C50.38 (14)C4—C5—C7—N2−84 (3)
C2—C3—C4—C8−178.71 (9)C3—C4—C8—N3122 (3)
C3—C4—C5—C6−1.41 (14)C5—C4—C8—N3−57 (4)
C8—C4—C5—C6177.69 (8)
D—H···AD—HH···AD···AD—H···A
C2—H2···N3i0.962 (14)2.621 (14)3.3880 (13)136.9 (11)
C3—H3···N2ii0.950 (14)2.554 (14)3.3955 (13)147.8 (10)
C6—H6···N3iii0.943 (13)2.457 (13)3.3412 (13)156.1 (10)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯N3i 0.962 (14)2.621 (14)3.3880 (13)136.9 (11)
C3—H3⋯N2ii 0.950 (14)2.554 (14)3.3955 (13)147.8 (10)
C6—H6⋯N3iii 0.943 (13)2.457 (13)3.3412 (13)156.1 (10)

Symmetry codes: (i) ; (ii) ; (iii) .

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