Literature DB >> 22798930

4-Nitro-phenol-2,4,6-triamino-1,3,5-triazine-water (2/1/1).

N Kanagathara, G Chakkaravarthi, M K Marchewka, S Gunasekaran, G Anbalagan.   

Abstract

In the title adduct, 2C(6)H(5)NO(3)·C(3)H(6)N(6)·H(2)O, the melamine and the two independent nitrophenol molecules are essentially planar, with maximum deviations of 0.0294 (10), 0.0706 (12) and 0.0742 (12) Å, respectively. In the crystal, N-H⋯N, O-H⋯N, N-H⋯O and O-H⋯O hydrogen bonds link the components into a three-dimensional network. In addition, weak π-π inter-actions [centroid-centroid distances = 3.728 (3) and 3.749 (3) Å] are observed.

Entities:  

Year:  2012        PMID: 22798930      PMCID: PMC3394065          DOI: 10.1107/S1600536812029066

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of melamine, see: Cook et al. (2005 ▶); Rima et al. (2008 ▶). For a related structure, see: Cousson et al. (2005 ▶).

Experimental

Crystal data

2C6H5NO3·C3H6N6·H2O M = 422.37 Triclinic, a = 7.123 (5) Å b = 10.577 (4) Å c = 13.680 (5) Å α = 68.256 (5)° β = 88.772 (6)° γ = 76.604 (5)° V = 928.9 (8) Å3 Z = 2 Mo Kα radiation μ = 0.12 mm−1 T = 295 K 0.30 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.964, T max = 0.976 21610 measured reflections 5696 independent reflections 4164 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.122 S = 1.03 5696 reflections 311 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812029066/lh5493sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812029066/lh5493Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812029066/lh5493Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C6H5NO3·C3H6N6·H2OZ = 2
Mr = 422.37F(000) = 440
Triclinic, P1Dx = 1.510 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.123 (5) ÅCell parameters from 21610 reflections
b = 10.577 (4) Åθ = 2.1–30.7°
c = 13.680 (5) ŵ = 0.12 mm1
α = 68.256 (5)°T = 295 K
β = 88.772 (6)°Block, yellow
γ = 76.604 (5)°0.30 × 0.20 × 0.20 mm
V = 928.9 (8) Å3
Bruker Kappa APEXII diffractometer5696 independent reflections
Radiation source: fine-focus sealed tube4164 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
ω and φ scansθmax = 30.7°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→10
Tmin = 0.964, Tmax = 0.976k = −15→15
21610 measured reflectionsl = −17→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0598P)2 + 0.1276P] where P = (Fo2 + 2Fc2)/3
5696 reflections(Δ/σ)max < 0.001
311 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C1−0.33225 (16)0.07164 (12)0.40065 (10)0.0341 (2)
C2−0.24544 (16)−0.05332 (12)0.48003 (9)0.0348 (2)
H2−0.1702−0.05490.53540.042*
C3−0.27246 (18)−0.17603 (13)0.47577 (9)0.0370 (3)
H3−0.2136−0.26170.52810.044*
C4−0.38715 (18)−0.17217 (13)0.39367 (10)0.0378 (3)
C5−0.47281 (18)−0.04548 (15)0.31426 (10)0.0423 (3)
H5−0.5486−0.04370.25900.051*
C6−0.44573 (17)0.07743 (14)0.31718 (10)0.0406 (3)
H6−0.50240.16300.26420.049*
C7−0.16167 (17)−0.02771 (12)0.09893 (9)0.0345 (2)
C8−0.20456 (18)0.11701 (13)0.05818 (10)0.0394 (3)
H8−0.28010.1679−0.00490.047*
C9−0.13380 (19)0.18491 (12)0.11231 (10)0.0387 (3)
H9−0.16180.28240.08600.046*
C10−0.02072 (16)0.10786 (12)0.20608 (9)0.0331 (2)
C110.01838 (17)−0.03791 (12)0.24690 (10)0.0357 (2)
H110.0921−0.08920.31050.043*
C12−0.05206 (17)−0.10608 (12)0.19311 (10)0.0361 (3)
H12−0.0263−0.20350.21970.043*
C130.26472 (17)0.45692 (12)0.11080 (9)0.0339 (2)
C140.36186 (16)0.58004 (11)0.19500 (9)0.0305 (2)
C150.10688 (16)0.48525 (11)0.24878 (9)0.0322 (2)
N1−0.30636 (15)0.20134 (11)0.40532 (10)0.0443 (3)
N2−0.22950 (16)−0.10017 (13)0.04030 (9)0.0447 (3)
N30.38541 (14)0.53546 (10)0.11487 (7)0.0338 (2)
N40.22586 (14)0.55802 (10)0.26462 (7)0.0329 (2)
N50.12224 (14)0.42855 (10)0.17511 (8)0.0359 (2)
N60.2906 (2)0.40378 (15)0.03568 (10)0.0538 (3)
N70.48129 (18)0.65529 (12)0.20504 (10)0.0444 (3)
N8−0.03642 (18)0.46571 (13)0.31286 (10)0.0465 (3)
O1−0.42179 (18)−0.28988 (12)0.38794 (9)0.0562 (3)
O2−0.21683 (16)0.19698 (11)0.48256 (9)0.0566 (3)
O3−0.37293 (19)0.31089 (11)0.33173 (12)0.0782 (4)
O40.05318 (15)0.16839 (10)0.26239 (8)0.0464 (2)
O5−0.31476 (16)−0.03215 (14)−0.04647 (9)0.0633 (3)
O6−0.19394 (18)−0.22987 (12)0.08023 (9)0.0632 (3)
O70.23235 (17)0.53850 (11)0.47450 (9)0.0526 (3)
H1−0.357 (3)−0.370 (3)0.4389 (18)0.093 (7)*
H40.054 (3)0.257 (2)0.2186 (15)0.071 (5)*
H6A0.216 (3)0.353 (2)0.0306 (14)0.063 (5)*
H6B0.378 (3)0.4227 (19)−0.0065 (14)0.060 (5)*
H7A0.243 (3)0.555 (2)0.4067 (17)0.075 (6)*
H7B0.252 (3)0.607 (2)0.4863 (17)0.084 (6)*
H7C0.576 (2)0.6648 (17)0.1643 (13)0.054 (5)*
H7D0.478 (2)0.6781 (18)0.2619 (15)0.061 (5)*
H8A−0.119 (2)0.4277 (18)0.3014 (14)0.058 (5)*
H8B−0.048 (2)0.4994 (19)0.3622 (15)0.062 (5)*
U11U22U33U12U13U23
C10.0295 (5)0.0342 (6)0.0400 (6)−0.0099 (4)0.0057 (4)−0.0143 (5)
C20.0353 (5)0.0380 (6)0.0333 (6)−0.0102 (5)0.0008 (4)−0.0151 (5)
C30.0442 (6)0.0343 (6)0.0329 (6)−0.0094 (5)0.0004 (5)−0.0129 (5)
C40.0430 (6)0.0430 (7)0.0358 (6)−0.0153 (5)0.0064 (5)−0.0214 (5)
C50.0385 (6)0.0548 (8)0.0365 (6)−0.0139 (6)−0.0014 (5)−0.0188 (6)
C60.0329 (6)0.0422 (7)0.0389 (6)−0.0057 (5)−0.0015 (5)−0.0083 (5)
C70.0374 (6)0.0389 (6)0.0356 (6)−0.0163 (5)0.0085 (5)−0.0195 (5)
C80.0446 (6)0.0391 (6)0.0321 (6)−0.0115 (5)−0.0014 (5)−0.0098 (5)
C90.0485 (7)0.0279 (5)0.0376 (6)−0.0099 (5)0.0000 (5)−0.0093 (5)
C100.0371 (6)0.0324 (5)0.0344 (6)−0.0131 (4)0.0055 (4)−0.0151 (5)
C110.0384 (6)0.0312 (6)0.0350 (6)−0.0080 (5)−0.0002 (5)−0.0096 (5)
C120.0418 (6)0.0271 (5)0.0409 (6)−0.0099 (4)0.0070 (5)−0.0135 (5)
C130.0448 (6)0.0315 (5)0.0297 (5)−0.0136 (5)−0.0005 (5)−0.0134 (5)
C140.0394 (6)0.0249 (5)0.0281 (5)−0.0092 (4)−0.0024 (4)−0.0100 (4)
C150.0380 (6)0.0265 (5)0.0317 (5)−0.0073 (4)0.0008 (4)−0.0105 (4)
N10.0362 (5)0.0353 (5)0.0616 (7)−0.0111 (4)0.0050 (5)−0.0169 (5)
N20.0466 (6)0.0588 (7)0.0475 (6)−0.0282 (5)0.0158 (5)−0.0326 (6)
N30.0446 (5)0.0344 (5)0.0288 (5)−0.0170 (4)0.0032 (4)−0.0148 (4)
N40.0412 (5)0.0300 (5)0.0322 (5)−0.0104 (4)0.0028 (4)−0.0160 (4)
N50.0440 (5)0.0357 (5)0.0360 (5)−0.0178 (4)0.0036 (4)−0.0175 (4)
N60.0714 (8)0.0706 (8)0.0509 (7)−0.0428 (7)0.0212 (6)−0.0438 (7)
N70.0581 (7)0.0516 (7)0.0411 (6)−0.0309 (6)0.0084 (5)−0.0269 (5)
N80.0490 (6)0.0521 (7)0.0498 (7)−0.0222 (5)0.0158 (5)−0.0265 (6)
O10.0798 (7)0.0498 (6)0.0523 (6)−0.0234 (6)−0.0038 (6)−0.0293 (5)
O20.0633 (6)0.0503 (6)0.0687 (7)−0.0224 (5)0.0021 (5)−0.0310 (5)
O30.0767 (8)0.0327 (5)0.1046 (10)−0.0105 (5)−0.0261 (7)−0.0024 (6)
O40.0633 (6)0.0399 (5)0.0426 (5)−0.0224 (4)−0.0035 (4)−0.0166 (4)
O50.0642 (7)0.0895 (9)0.0527 (6)−0.0272 (6)−0.0010 (5)−0.0398 (6)
O60.0876 (8)0.0572 (6)0.0702 (7)−0.0425 (6)0.0180 (6)−0.0382 (6)
O70.0817 (7)0.0497 (6)0.0421 (6)−0.0346 (5)0.0143 (5)−0.0242 (5)
C1—C21.3766 (17)C13—N61.3333 (16)
C1—C61.3877 (18)C13—N31.3414 (14)
C1—N11.4501 (16)C13—N51.3421 (16)
C2—C31.3774 (17)C14—N71.3326 (15)
C2—H20.9300C14—N31.3381 (14)
C3—C41.3857 (17)C14—N41.3418 (16)
C3—H30.9300C15—N81.3335 (17)
C4—O11.3538 (15)C15—N41.3384 (15)
C4—C51.3852 (19)C15—N51.3416 (15)
C5—C61.3726 (19)N1—O31.2176 (16)
C5—H50.9300N1—O21.2266 (16)
C6—H60.9300N2—O51.2212 (17)
C7—C81.3804 (18)N2—O61.2386 (17)
C7—C121.3815 (18)N6—H6A0.860 (18)
C7—N21.4518 (15)N6—H6B0.845 (18)
C8—C91.3770 (17)N7—H7C0.867 (17)
C8—H80.9300N7—H7D0.894 (19)
C9—C101.3871 (18)N8—H8A0.830 (17)
C9—H90.9300N8—H8B0.867 (19)
C10—O41.3488 (14)O1—H10.90 (2)
C10—C111.3915 (17)O4—H40.91 (2)
C11—C121.3747 (17)O7—H7A0.88 (2)
C11—H110.9300O7—H7B0.84 (2)
C12—H120.9300
C2—C1—C6122.08 (11)C11—C12—C7119.00 (11)
C2—C1—N1118.88 (11)C11—C12—H12120.5
C6—C1—N1119.04 (11)C7—C12—H12120.5
C1—C2—C3118.59 (11)N6—C13—N3116.17 (11)
C1—C2—H2120.7N6—C13—N5118.22 (11)
C3—C2—H2120.7N3—C13—N5125.61 (10)
C2—C3—C4120.13 (11)N7—C14—N3117.08 (11)
C2—C3—H3119.9N7—C14—N4117.29 (10)
C4—C3—H3119.9N3—C14—N4125.61 (10)
O1—C4—C5117.44 (12)N8—C15—N4117.07 (11)
O1—C4—C3122.07 (12)N8—C15—N5117.58 (11)
C5—C4—C3120.48 (11)N4—C15—N5125.34 (10)
C6—C5—C4119.93 (12)O3—N1—O2122.26 (12)
C6—C5—H5120.0O3—N1—C1118.70 (12)
C4—C5—H5120.0O2—N1—C1119.04 (11)
C5—C6—C1118.78 (12)O5—N2—O6122.77 (11)
C5—C6—H6120.6O5—N2—C7119.29 (12)
C1—C6—H6120.6O6—N2—C7117.92 (12)
C8—C7—C12121.83 (10)C14—N3—C13114.25 (10)
C8—C7—N2119.31 (12)C15—N4—C14114.57 (10)
C12—C7—N2118.84 (11)C15—N5—C13114.40 (9)
C9—C8—C7118.99 (11)C13—N6—H6A118.8 (12)
C9—C8—H8120.5C13—N6—H6B119.2 (12)
C7—C8—H8120.5H6A—N6—H6B122.0 (17)
C8—C9—C10119.96 (11)C14—N7—H7C118.7 (11)
C8—C9—H9120.0C14—N7—H7D118.9 (11)
C10—C9—H9120.0H7C—N7—H7D121.0 (15)
O4—C10—C9122.67 (11)C15—N8—H8A119.2 (12)
O4—C10—C11117.05 (11)C15—N8—H8B119.5 (11)
C9—C10—C11120.27 (10)H8A—N8—H8B121.1 (16)
C12—C11—C10119.93 (12)C4—O1—H1114.2 (14)
C12—C11—H11120.0C10—O4—H4107.8 (12)
C10—C11—H11120.0H7A—O7—H7B108.7 (19)
C6—C1—C2—C30.14 (18)C2—C1—N1—O3175.39 (13)
N1—C1—C2—C3179.25 (11)C6—C1—N1—O3−5.47 (18)
C1—C2—C3—C4−0.89 (18)C2—C1—N1—O2−3.93 (17)
C2—C3—C4—O1−178.18 (11)C6—C1—N1—O2175.21 (11)
C2—C3—C4—C51.15 (18)C8—C7—N2—O53.71 (17)
O1—C4—C5—C6178.73 (12)C12—C7—N2—O5−174.89 (11)
C3—C4—C5—C6−0.63 (19)C8—C7—N2—O6−177.86 (11)
C4—C5—C6—C1−0.12 (18)C12—C7—N2—O63.55 (17)
C2—C1—C6—C50.37 (18)N7—C14—N3—C13178.15 (11)
N1—C1—C6—C5−178.74 (11)N4—C14—N3—C13−3.37 (16)
C12—C7—C8—C90.89 (18)N6—C13—N3—C14−176.36 (11)
N2—C7—C8—C9−177.66 (11)N5—C13—N3—C143.84 (17)
C7—C8—C9—C100.24 (19)N8—C15—N4—C14−177.10 (11)
C8—C9—C10—O4179.76 (12)N5—C15—N4—C144.13 (17)
C8—C9—C10—C11−1.32 (18)N7—C14—N4—C15178.19 (11)
O4—C10—C11—C12−179.73 (11)N3—C14—N4—C15−0.29 (16)
C9—C10—C11—C121.29 (18)N8—C15—N5—C13177.51 (11)
C10—C11—C12—C7−0.18 (18)N4—C15—N5—C13−3.73 (17)
C8—C7—C12—C11−0.92 (18)N6—C13—N5—C15179.61 (12)
N2—C7—C12—C11177.64 (10)N3—C13—N5—C15−0.59 (17)
D—H···AD—HH···AD···AD—H···A
O1—H1···O7i0.90 (2)1.76 (2)2.6600 (18)172 (2)
O4—H4···N50.91 (2)1.87 (2)2.7217 (16)157 (2)
N6—H6A···O6ii0.860 (18)2.363 (19)3.0276 (16)134 (2)
N6—H6B···N3iii0.845 (18)2.235 (19)3.080 (2)178 (2)
O7—H7A···N40.88 (2)1.94 (2)2.8020 (18)166 (2)
O7—H7B···O2iv0.84 (2)2.22 (2)3.0424 (18)164 (2)
N7—H7C···O6v0.867 (17)2.250 (17)3.056 (2)155 (2)
N7—H7D···O1v0.894 (19)2.049 (19)2.8996 (17)159 (2)
N8—H8A···O30.830 (17)2.367 (18)3.158 (2)159 (2)
N8—H8B···O7iv0.867 (19)2.517 (18)3.1890 (19)135 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O7i 0.90 (2)1.76 (2)2.6600 (18)172 (2)
O4—H4⋯N50.91 (2)1.87 (2)2.7217 (16)157 (2)
O7—H7A⋯N40.88 (2)1.94 (2)2.8020 (18)166 (2)
O7—H7B⋯O2iv 0.84 (2)2.22 (2)3.0424 (18)164 (2)
N6—H6A⋯O6ii 0.860 (18)2.363 (19)3.0276 (16)134 (2)
N6—H6B⋯N3iii 0.845 (18)2.235 (19)3.080 (2)178 (2)
N7—H7C⋯O6v 0.867 (17)2.250 (17)3.056 (2)155 (2)
N7—H7D⋯O1v 0.894 (19)2.049 (19)2.8996 (17)159 (2)
N8—H8A⋯O30.830 (17)2.367 (18)3.158 (2)159 (2)
N8—H8B⋯O7iv 0.867 (19)2.517 (18)3.1890 (19)135 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  3 in total

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Authors:  Helmy A Cook; Christian W Klampfl; Wolfgang Buchberger
Journal:  Electrophoresis       Date:  2005-04       Impact factor: 3.535

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
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1.  3-Nitro-phenol-1,3,5-triazine-2,4,6-tri-amine (2/1).

Authors:  V Sangeetha; N Kanagathara; G Chakkaravarthi; M K Marchewka; G Anbalagan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-04

2.  Crystal structure of 2-phenyl-ethyl-amin-ium 4-nitro-phenolate monohydrate.

Authors:  N Swarna Sowmya; S Sampathkrishnan; S Sudhahar; R Mohan Kumar; G Chakkaravarthi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-21

3.  2,4,6-Tri-amino-1,3,5-triazin-1-ium 3-(prop-2-eno-yloxy)propano-ate acrylic acid monosolvate monohydrate.

Authors:  V Sangeetha; N Kanagathara; G Chakkaravarthi; M K Marchewka; G Anbalagan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-17
  3 in total

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