Literature DB >> 22740367

Degradation of mRNAs that lack a stop codon: a decade of nonstop progress.

A Alejandra Klauer1, Ambro van Hoof.   

Abstract

Nonstop decay is the mechanism of identifying and disposing aberrant transcripts that lack in-frame stop codons. It is hypothesized that these transcripts are identified during translation when the ribosome arrives at the 3' end of the mRNA and stalls. Presumably, the ribosome stalling recruits additional cofactors, Ski7 and the exosome complex. The exosome degrades the transcript using either one of its ribonucleolytic activities, and the ribosome and the peptide are both released. Additional precautionary measures by the nonstop decay pathway may include translational repression of the nonstop transcript after translation, and proteolysis of the released peptide by the proteasome. This surveillance mechanism protects the cells from potentially harmful truncated proteins, but it may also be involved in mediating critical cellular functions of transcripts that are prone to stop codon read-through. Important advances have been made in the past decade as we learn that nonstop decay may have implications in human disease.
Copyright © 2012 John Wiley & Sons, Ltd.

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Year:  2012        PMID: 22740367      PMCID: PMC3638749          DOI: 10.1002/wrna.1124

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  98 in total

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Journal:  Genetics       Date:  2005-06-18       Impact factor: 4.562

6.  Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation.

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7.  The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif.

Authors:  T Dunckley; R Parker
Journal:  EMBO J       Date:  1999-10-01       Impact factor: 11.598

8.  Translation of aberrant mRNAs lacking a termination codon or with a shortened 3'-UTR is repressed after initiation in yeast.

Authors:  Toshifumi Inada; Hiroji Aiba
Journal:  EMBO J       Date:  2005-03-31       Impact factor: 11.598

9.  The human PAF complex coordinates transcription with events downstream of RNA synthesis.

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10.  A new yeast poly(A) polymerase complex involved in RNA quality control.

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Journal:  PLoS Biol       Date:  2005-04-19       Impact factor: 8.029

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  68 in total

1.  Release factor eRF3 mediates premature translation termination on polylysine-stalled ribosomes in Saccharomyces cerevisiae.

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2.  Crystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae.

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3.  CryoEM structure of yeast cytoplasmic exosome complex.

Authors:  Jun-Jie Liu; Chu-Ya Niu; Yao Wu; Dan Tan; Yang Wang; Ming-Da Ye; Yang Liu; Wenwei Zhao; Ke Zhou; Quan-Sheng Liu; Junbiao Dai; Xuerui Yang; Meng-Qiu Dong; Niu Huang; Hong-Wei Wang
Journal:  Cell Res       Date:  2016-05-13       Impact factor: 25.617

4.  Biallelic in-frame deletion in TRAPPC4 in a family with developmental delay and cerebellar atrophy.

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Review 5.  The determinants of alternative RNA splicing in human cells.

Authors:  Tatsiana V Ramanouskaya; Vasily V Grinev
Journal:  Mol Genet Genomics       Date:  2017-07-13       Impact factor: 3.291

Review 6.  The Interplay between the RNA Decay and Translation Machinery in Eukaryotes.

Authors:  Adam M Heck; Jeffrey Wilusz
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-05-01       Impact factor: 10.005

Review 7.  The intimate relationships of mRNA decay and translation.

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Journal:  Trends Genet       Date:  2013-09-30       Impact factor: 11.639

Review 8.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

Review 9.  NMD: a multifaceted response to premature translational termination.

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10.  The RNA Exosome Channeling and Direct Access Conformations Have Distinct In Vivo Functions.

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