Literature DB >> 25195903

Crystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae.

Ji-Young Lee1, Si Hoon Park1, Byung-Cheon Jeong1, Hyun Kyu Song1.   

Abstract

Ski7 (superkiller protein 7) plays a critical role in the mRNA surveillance pathway. The C-terminal fragment of Ski7 (residues 520-747) from Saccharomyces cerevisiae was heterologously expressed in Escherichia coli and purified to homogeneity. It was successfully crystallized and preliminary X-ray data were collected to 2.0 Å resolution using synchrotron radiation. The crystal belonged to a trigonal space group, either P3121 or P3221, with unit-cell parameters a = b = 73.5, c = 83.6 Å. The asymmetric unit contains one molecule of the C-terminal fragment of Ski7 with a corresponding crystal volume per protein mass (VM) of 2.61 Å(3) Da(-1) and a solvent content of 52.8% by volume. The merging R factor is 6.6%. Structure determination by MAD phasing is under way.

Entities:  

Keywords:  RNA degradation; Saccharomyces cerevisiae; Ski7; mRNA surveillance; nonstop decay

Mesh:

Substances:

Year:  2014        PMID: 25195903      PMCID: PMC4157430          DOI: 10.1107/S2053230X14016872

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  28 in total

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Journal:  Mol Cell       Date:  2007-09-21       Impact factor: 17.970

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Authors:  J S Anderson; R P Parker
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7.  C-terminal interaction of translational release factors eRF1 and eRF3 of fission yeast: G-domain uncoupled binding and the role of conserved amino acids.

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8.  Interaction between yeast Sup45p (eRF1) and Sup35p (eRF3) polypeptide chain release factors: implications for prion-dependent regulation.

Authors:  S V Paushkin; V V Kushnirov; V N Smirnov; M D Ter-Avanesyan
Journal:  Mol Cell Biol       Date:  1997-05       Impact factor: 4.272

9.  Cryo-EM structure of the mammalian eukaryotic release factor eRF1-eRF3-associated termination complex.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

10.  Chromosomal superkiller mutants of Saccharomyces cerevisiae.

Authors:  A Toh-E; P Guerry; R B Wickner
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