Literature DB >> 22722204

PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos.

Toshinobu Nakamura1, Yu-Jung Liu, Hiroyuki Nakashima, Hiroki Umehara, Kimiko Inoue, Shogo Matoba, Makoto Tachibana, Atsuo Ogura, Yoichi Shinkai, Toru Nakano.   

Abstract

The modification of DNA by 5-methylcytosine (5mC) has essential roles in cell differentiation and development through epigenetic gene regulation. 5mC can be converted to another modified base, 5-hydroxymethylcytosine (5hmC), by the tet methylcytosine dioxygenase (Tet) family of enzymes. Notably, the balance between 5hmC and 5mC in the genome is linked with cell-differentiation processes such as pluripotency and lineage commitment. We have previously reported that the maternal factor PGC7 (also known as Dppa3, Stella) is required for the maintenance of DNA methylation in early embryogenesis, and protects 5mC from conversion to 5hmC in the maternal genome. Here we show that PGC7 protects 5mC from Tet3-mediated conversion to 5hmC by binding to maternal chromatin containing dimethylated histone H3 lysine 9 (H3K9me2) in mice. In addition, imprinted loci that are marked with H3K9me2 in mature sperm are protected by PGC7 binding in early embryogenesis. This type of regulatory mechanism could be involved in DNA modifications in somatic cells as well as in early embryos.

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Year:  2012        PMID: 22722204     DOI: 10.1038/nature11093

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  25 in total

1.  Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b.

Authors:  Akiko Tsumura; Tomohiro Hayakawa; Yuichi Kumaki; Shin-ichiro Takebayashi; Morito Sakaue; Chisa Matsuoka; Kunitada Shimotohno; Fuyuki Ishikawa; En Li; Hiroki R Ueda; Jun-ichi Nakayama; Masaki Okano
Journal:  Genes Cells       Date:  2006-07       Impact factor: 1.891

2.  TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity.

Authors:  Kristine Williams; Jesper Christensen; Marianne Terndrup Pedersen; Jens V Johansen; Paul A C Cloos; Juri Rappsilber; Kristian Helin
Journal:  Nature       Date:  2011-04-13       Impact factor: 49.962

3.  Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.

Authors:  Yu-Fei He; Bin-Zhong Li; Zheng Li; Peng Liu; Yang Wang; Qingyu Tang; Jianping Ding; Yingying Jia; Zhangcheng Chen; Lin Li; Yan Sun; Xiuxue Li; Qing Dai; Chun-Xiao Song; Kangling Zhang; Chuan He; Guo-Liang Xu
Journal:  Science       Date:  2011-08-04       Impact factor: 47.728

4.  PGC7/Stella protects against DNA demethylation in early embryogenesis.

Authors:  Toshinobu Nakamura; Yoshikazu Arai; Hiroki Umehara; Masaaki Masuhara; Tohru Kimura; Hisaaki Taniguchi; Toshihiro Sekimoto; Masahito Ikawa; Yoshihiro Yoneda; Masaru Okabe; Satoshi Tanaka; Kunio Shiota; Toru Nakano
Journal:  Nat Cell Biol       Date:  2006-12-03       Impact factor: 28.824

5.  Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells.

Authors:  Kian Peng Koh; Akiko Yabuuchi; Sridhar Rao; Yun Huang; Kerrianne Cunniff; Julie Nardone; Asta Laiho; Mamta Tahiliani; Cesar A Sommer; Gustavo Mostoslavsky; Riitta Lahesmaa; Stuart H Orkin; Scott J Rodig; George Q Daley; Anjana Rao
Journal:  Cell Stem Cell       Date:  2011-02-04       Impact factor: 24.633

6.  5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming.

Authors:  Mark Wossidlo; Toshinobu Nakamura; Konstantin Lepikhov; C Joana Marques; Valeri Zakhartchenko; Michele Boiani; Julia Arand; Toru Nakano; Wolf Reik; Jörn Walter
Journal:  Nat Commun       Date:  2011       Impact factor: 14.919

7.  Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine.

Authors:  Khursheed Iqbal; Seung-Gi Jin; Gerd P Pfeifer; Piroska E Szabó
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-14       Impact factor: 11.205

8.  G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis.

Authors:  Makoto Tachibana; Kenji Sugimoto; Masami Nozaki; Jun Ueda; Tsutomu Ohta; Misao Ohki; Mikiko Fukuda; Naoki Takeda; Hiroyuki Niida; Hiroyuki Kato; Yoichi Shinkai
Journal:  Genes Dev       Date:  2002-07-15       Impact factor: 11.361

9.  Jmjd1a demethylase-regulated histone modification is essential for cAMP-response element modulator-regulated gene expression and spermatogenesis.

Authors:  Zhaoliang Liu; Suoling Zhou; Lan Liao; Xian Chen; Marvin Meistrich; Jianming Xu
Journal:  J Biol Chem       Date:  2009-11-12       Impact factor: 5.157

10.  Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway.

Authors:  Petra Hajkova; Sean J Jeffries; Caroline Lee; Nigel Miller; Stephen P Jackson; M Azim Surani
Journal:  Science       Date:  2010-07-02       Impact factor: 47.728

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  170 in total

Review 1.  Molecular insights into transgenerational non-genetic inheritance of acquired behaviours.

Authors:  Johannes Bohacek; Isabelle M Mansuy
Journal:  Nat Rev Genet       Date:  2015-09-29       Impact factor: 53.242

Review 2.  DNA methylation remodeling in vitro and in vivo.

Authors:  Amander T Clark
Journal:  Curr Opin Genet Dev       Date:  2015-10-24       Impact factor: 5.578

3.  A twist in zygotic reprogramming.

Authors:  Daniel M Messerschmidt
Journal:  Nat Cell Biol       Date:  2016-02       Impact factor: 28.824

Review 4.  Molecular features of cellular reprogramming and development.

Authors:  Zachary D Smith; Camille Sindhu; Alexander Meissner
Journal:  Nat Rev Mol Cell Biol       Date:  2016-02-17       Impact factor: 94.444

5.  Non-germ Line Restoration of Genomic Imprinting for a Small Subset of Imprinted Genes in Ubiquitin-like PHD and RING Finger Domain-Containing 1 (Uhrf1) Null Mouse Embryonic Stem Cells.

Authors:  Shankang Qi; Zhiqiang Wang; Pishun Li; Qihan Wu; Tieliu Shi; Jiwen Li; Jiemin Wong
Journal:  J Biol Chem       Date:  2015-04-21       Impact factor: 5.157

6.  Programming and inheritance of parental DNA methylomes in mammals.

Authors:  Lu Wang; Jun Zhang; Jialei Duan; Xinxing Gao; Wei Zhu; Xingyu Lu; Lu Yang; Jing Zhang; Guoqiang Li; Weimin Ci; Wei Li; Qi Zhou; Neel Aluru; Fuchou Tang; Chuan He; Xingxu Huang; Jiang Liu
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

7.  Oct4 and the small molecule inhibitor, SC1, regulates Tet2 expression in mouse embryonic stem cells.

Authors:  Yongyan Wu; Zekun Guo; Ye Liu; Bo Tang; Yi Wang; Liping Yang; Juan Du; Yong Zhang
Journal:  Mol Biol Rep       Date:  2012-12-20       Impact factor: 2.316

Review 8.  Breathing-in epigenetic change with vitamin C.

Authors:  Asun Monfort; Anton Wutz
Journal:  EMBO Rep       Date:  2013-03-15       Impact factor: 8.807

Review 9.  Lessons for inductive germline determination.

Authors:  Riyad N H Seervai; Gary M Wessel
Journal:  Mol Reprod Dev       Date:  2013-02-28       Impact factor: 2.609

10.  Cyclic DNA remethylation following active demethylation at euchromatic regions in mouse embryonic stem cells.

Authors:  Musashi Kubiura-Ichimaru; Takamasa Ito; Louis Lefebvre; Masako Tada
Journal:  Chromosome Res       Date:  2020-11-17       Impact factor: 5.239

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