| Literature DB >> 22720064 |
Hooman Khademi1, Amir-Reza Radmard, Fatemeh Malekzadeh, Farin Kamangar, Siavosh Nasseri-Moghaddam, Mattias Johansson, Graham Byrnes, Paul Brennan, Reza Malekzadeh.
Abstract
OBJECTIVES: We investigated whether using demographic characteristics and alarm symptoms can accurately predict cancer in patients with dyspepsia in Iran, where upper GI cancers and H. pylori infection are common.Entities:
Mesh:
Year: 2012 PMID: 22720064 PMCID: PMC3374763 DOI: 10.1371/journal.pone.0039173
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1The risk scores and their corresponding risk probabilities derived from the suggested risk-prediction model.
Figure 2ROC curves based on three predictive model for upper GI malignancy in dyspeptic patients, including model1; only age included, model2; age plus alarm symptoms, and model3; the risk-prediction model.
Demographic characteristics, habits and distribution of alarm symptoms in all dyspeptic patients and who with upper GI malignancy.
| All patients with dyspepsia | Dyspeptic patients with UGI malignancy |
| |||
| Frequency | percentage | Frequency | percentage | ||
| Age (±SD) | 42.5±15.0 | 58.0±15.4 | <0.001 | ||
| Gender | |||||
| Female | 1,439 | 50.5 | 34 | 39.1 | 0.030 |
| Male | 1,408 | 49.5 | 53 | 60.9 | |
| Education level | |||||
| Less than high school | 743 | 26.4 | 43 | 52.4 | <0.001 |
| Higher education | 2,075 | 73.6 | 27 | 47.6 | |
| Body Mass Index (kg/m2) | |||||
| Underweight (<18.5) | 146 | 5.4 | 2 | 2.6 | 0.008 |
| Normal (18.5–24.9) | 1,310 | 48.5 | 52 | 67.5 | |
| Overweight (25–29.9) | 965 | 35.7 | 19 | 24.7 | |
| Obese (≥30) | 282 | 10.4 | 4 | 5.2 | |
| History of weight loss | |||||
| Negative | 2,533 | 89.0 | 49 | 56.3 | <0.001 |
| Positive | 314 | 11.0 | 38 | 43.7 | |
| History of GI bleeding | |||||
| Negative | 2,435 | 85.5 | 66 | 75.9 | 0.009 |
| Positive | 412 | 14.5 | 21 | 24.1 | |
| History of persistent vomiting | |||||
| Negative | 2,525 | 88.7 | 63 | 72.4 | <0.001 |
| Positive | 322 | 11.3 | 24 | 27.6 | |
| History of dysphagia | |||||
| Negative | 2,300 | 80.8 | 61 | 70.1 | 0.010 |
| Positive | 547 | 19.2 | 26 | 29.9 | |
| Family history of upper GI cancer | |||||
| Negative | 2,583 | 91.3 | 74 | 85.1 | 0.037 |
| Positive | 247 | 8.7 | 13 | 14.9 | |
| Cigarette smoking | |||||
| Never smoker | 2,326 | 81.7 | 56 | 64.4 | <0.001 |
| Ex-smoker | 102 | 3.6 | 5 | 5.8 | |
| Current light smoker | 328 | 11.5 | 13 | 14.9 | |
| Current heavy smoker | 91 | 3.2 | 13 | 14.9 | |
|
| |||||
| Negative | 1,492 | 53.1 | 25 | 29.4 | <0.001 |
| Positive | 1,318 | 46.9 | 60 | 70.6 | |
Since we had some missing information in educational level, weigh, height, and H. pylori test results, the sum of frequencies in these variables is not equal to study sample size.
H. pylori infection was detected based on Rapid Urease Test (RUT), during endoscopy.
P values are calculated using independent sample t-test for age and chi-square tests for other variables to compare the distribution of the variables between patients with and without UGI malignancy.
Endoscopic and histologic findings in study population.
| Frequency | Percent | ||
| GE Reflux Disease (GERD) | |||
| No GERD | 781 | 27.4 | |
| GERD-A | 1,555 | 54.6 | |
| GERD-B | 443 | 15.6 | |
| GERD-C | 64 | 2.3 | |
| GERD-D | 4 | 0.1 | |
| Peptic Ulcer Disease (PUD) | |||
| No PUD | 2,420 | 85.0 | |
| Duodenal ulcer | 393 | 13.8 | |
| Gastric ulcer | 27 | 0.9 | |
| Synchronous ulcer | 7 | 0.3 | |
| Upper GI Malignancy | |||
| No malignancy | 2,760 | 96.9 | |
| Esophageal | 16 | 0.6 | |
| Gastric | 68 | 2.4 | |
| Duodenal | 3 | 0.1 | |
| Cancer Grade | |||
| Esophageal | Well-diff | 12 | 75.0 |
| Intermediate-diff | 4 | 25.0 | |
| Poor-diff | 0 | 0.0 | |
| Gastric | Well-diff | 35 | 51.5 |
| Intermediate-diff | 27 | 39.7 | |
| Poor-diff | 6 | 8.8 | |
| Duodenal | Well-diff | 0 | 0.0 |
| Intermediate-diff | 3 | 100 | |
| Poor-diff | 0 | 0.0 | |
| Cancer Morphology | |||
| Esophageal | SCC | 10 | 62.5 |
| Adenocarcinoma | 6 | 37.5 | |
| Gastric | Adenocarcinoma | 60 | 88.2 |
| MALT | 8 | 11.8 | |
| Duodenal | Adenocarcinoma | 3 | 100 |
| Cancer Topography | |||
| Esophageal | Upper third | 2 | 12.5 |
| Middle third | 11 | 68.7 | |
| Lower third | 3 | 18.8 | |
| Gastric | GE junction | 4 | 5.9 |
| Cardia | 14 | 20.6 | |
| Corpus | 22 | 32.3 | |
| Antrum | 24 | 35.3 | |
| Diffuse | 4 | 5.9 | |
| Duodenal | D1 | 2 | 66.7 |
| D2 | 1 | 33.3 | |
Estimated odds ratios of demographic characteristics and alarm symptoms for upper GI malignancies, based on unadjusted and multivariable adjusted regression models.
| OR for Upper GI Cancers | ||
| Unadjusted model | Multivariable adjusted model | |
| Age categories | ||
| ≤35 years old | ref | ref |
| 36–49 years old | 2.83 (1.19–6.77) | 4.13 (1.60–10.6) |
| 50–64 years old | 5.51 (2.36–12.9) | 6.83 (2.68–17.4) |
| ≥65 years old | 23.4 (10.3–53.2) | 22.8 (8.86–58.5) |
| Gender | ||
| Female | ref | ref |
| Male | 1.62 (1.04–2.50) | 1.39 (0.82–2.38) |
| Education level | ||
| Higher education | ref | ref |
| Less than high school | 3.21 (2.06–4.99) | 1.51 (0.89–2.57) |
| History of weight loss | ||
| Negative | ref | ref |
| Positive | 6.98 (4.49–10.8) | 4.89 (2.91–8.23) |
| History of GI bleeding | ||
| Negative | ref | ref |
| Positive | 1.93 (1.17–3.19) | 1.77 (1.01–3.10) |
| History of persistent vomiting | ||
| Negative | ref | ref |
| Positive | 3.15 (1.94–5.11) | 2.26 (1.27–4.03) |
| History of dysphagia | ||
| Negative | ref | ref |
| Positive | 1.83 (1.15–2.93) | 1.16 (0.66–2.05) |
| Family history of upper GI cancer | ||
| Negative | ref | ref |
| Positive | 1.88 (1.03–3.45) | 2.00 (1.01–3.95) |
| Cigarette smoking | ||
| Never smoker | ref | ref |
| Ex-smoker | 2.09 (0.82–5.33) | 0.88 (0.25–3.08) |
| Current light smoker | 1.67 (0.90–3.09) | 2.03 (1.02–4.04) |
| Current heavy smoker | 6.75 (3.55–12.9) | 5.07 (2.33–11.0) |
| Body mass index (Kg/m2) | ||
| Under weight (<18.5) | 0.34 (0.08–1.39) | 0.48 (0.10–2.17) |
| Normal weight (18.5–24.9) | ref | ref |
| Over weight (25–29.9) | 0.48 (0.28–0.83) | 0.65 (0.36–1.18) |
| Obese (≥30) | 0.35 (0.12–0.97) | 0.59 (0.20–1.71) |
|
| ||
| Negative | ref | ref |
| Positive | 2.80 (1.74–4.49) | 2.08 (1.24–3.47) |
Multivariable model is adjusted for age, gender, educational level, cigarette smoking and history of weight loss, GI bleeding, persistent vomiting and dysphagia.
H. pylori infection is detected based on Rapid Urease Test (RUT), during endoscopy.
Risk-prediction model for predicting risk of upper GI malignancy in dyspeptic patients.
| Regression Coefficient (95%CI) |
| |
| Age categories | ||
| 36–49 yrs old | 1.3 (0.4 to 2.3) | 0.006 |
| 50–64 yrs old | 1.9 (1.0 to 2.9) | <0.001 |
| ≥65 yrs old | 3.3 (2.4 to 4.2) | <0.001 |
| Weight loss | 1.3 (0.6 to 1.9) | <0.001 |
| Persistent vomiting | 0.9 (0.3 to 1.5) | 0.003 |
| GI bleeding | 1.0 (0.4 to 1.6) | 0.002 |
| Weight loss×Dysphagia | 1.1 (0.3 to 2.0) | 0.012 |
| GI bleeding×Dysphagia | −1.5 (−2.8 to −0.1) | 0.037 |
| Family history of upper GI cancer | 0.7 (0.0 to 1.4) | 0.048 |
| Cigarette smoking | ||
| Current light smokers | 0.8 (0.1 to 1.5) | 0.017 |
| Current heavy smokers | 1.8 (1.0 to 2.5) | <0.001 |
| Constant | −6.2 (−7.1 to −5.3) | <0.001 |
The diagnostic characteristics of choosing different risk score cut-off levels, derived from the risk-prediction model.
| Thresholds for risk score | Sensitivity% | Specificity% | Correctly classified% | No. patients | No. missing cancers | Probability% |
| RS≥2.2 | 100 | 24.5 | 26.7 | 749 | 0 | 0.4 |
| RS≥3.1 | 93.8 | 51.6 | 52.8 | 1,408 | 5 | 1 |
| RS≥4.2 | 76.5 | 78.9 | 78.9 | 2,211 | 20 | 3 |
| RS≥5.5 | 42.0 | 95.0 | 93.5 | 2,634 | 47 | 10 |
| RS≥6.6 | 29.6 | 98.9 | 96.9 | 2,749 | 57 | 25 |
The number of patients that have a RS of less than the chosen threshold.
The number of cancer patients that have a RS of less than the chosen threshold and consequently are missed, due to not being selected for prompt endoscopy.
The probability of having cancer when the RS is exactly equal to the threshold, according to mentioned formulae in the method section.
Performance of three different models for predicting UGI malignancy in dyspeptic patients.
| Performance measure | Prediction Models | ||
| Model1 | Model2 | Model3 | |
| Overall | |||
| Brier | 0.027 | 0.025 | 0.024 |
| Brierscaled
| 4.2% | 12.0% | 16.5% |
|
| 12.9% | 22.3% | 26.9% |
| Discrimination | |||
| Area under ROC | 0.760 (0.709 to 0.812) | 0.822 (0.774 to 0.870) | 0.852(0.812 to 0.893) |
| Discrimination slope | 0.043 | 0.115 | 0.158 |
| Calibration | |||
| Hosmer-Lemeshow test |
|
|
|
| P = 0.86 | P = 0.82 | P = 0.71 | |
| Global model fit | |||
| Akaike information criterion (AIC) | 663.5 | 607.4 | 583.9 |
| Bayesian information criterion (BIC) | 687.2 | 655.0 | 655.2 |
| Reclassification | |||
| Net improvement index (NRI) | |||
| Model2 vs. Model1 | 22.3% | ||
| Model3 vs. Model1 | 42.2% | ||
| Model3 vs. Model2 | 23.3% | ||
| Integrated discrimination index (IDI) | |||
| Model2 vs. Model1 | 7.2% | ||
| Model3 vs. Model1 | 11.5% | ||
| Model3 vs. Model2 | 4.3% | ||
Model1: age only; Model2: age plus four alarm symptoms (weigh loss, persistent vomiting, GI bleeding, dysphagia); Model3: risk-prediction model.
Brier = 1−Brier/Brier, where Brier = mean(p)×(1−mean(p)); and mean(p) is mean probability of outcome prediction based on model.
Reclassification table for age and alarm symptom model (Model2) and risk-prediction model (Model3).
| Model2 | Model3 | |||||
| <1% | 1–9% | 10–24% | > = 25% | Total | ||
| Event | ||||||
| <1% | 2 | 1 | 0 | 0 | 3 | |
| 1–9% | 3 | 40 | 1 | 2 | 46 | |
| 10–24% | 0 | 1 | 8 | 4 | 13 | |
| > = 25% | 0 | 0 | 2 | 18 | 20 | |
|
| 5 | 42 | 11 | 24 | 82 | |
| Nonevent | ||||||
| <1% | 789 | 21 | 0 | 0 | 810 | |
| 1–9% | 603 | 1,150 | 41 | 1 | 1,795 | |
| 10–24% | 0 | 19 | 52 | 9 | 80 | |
| > = 25% | 0 | 2 | 15 | 17 | 34 | |
|
| 1,392 | 1,192 | 108 | 27 | 2,719 | |
| All | ||||||
| <1% | 791 | 22 | 0 | 0 | 813 (29.0)%event = 0.3 | |
| 1–9% | 606 | 1,190 | 42 | 3 | 1841 (65.7)%event = 2.5 | |
| 10–24% | 0 | 20 | 60 | 13 | 93 (3.4)%event = 13.4 | |
| > = 25% | 0 | 2 | 17 | 35 | 54 (1.9)%event = 37.0 | |
|
| 1,397 (49.9)%event = 0.3 | 1,234 (44.1)%event = 3.4 | 119 (4.2)%event = 9.2 | 51 (1.8)%event = 47.1 | 2801 | |
Model2: age plus four alarm symptoms (weigh loss, persistent vomiting, GI bleeding, dysphagia); Model3: risk-prediction model.