Literature DB >> 22719712

2-Amino-4-(4-chloro-phen-yl)-7,7-dimethyl-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile propan-2-one monosolvate.

Shaaban K Mohamed, Mehmet Akkurt, Muhammad N Tahir, Antar A Abdelhamid, Mustafa R Albayati.   

Abstract

In the title compound, C(18)H(17)ClN(2)O(2)·C(3)H(6)O, the 4H-pyran ring is nearly planar [maximum deviation = -0.108 (1) Å] and the cyclo-hexene ring is puckered [puckering parameters Q(T) = 0.4596 (17) Å, θ = 55.9 (2)° and ϕ = 226.5 (3)°]. The 4H-pyran ring is approximately perpendicular to the benzene ring [dihedral angle = 84.35 (7)°] and is almost coplanar with the mean plane of the cyclo-hexene ring [dihedral angle = 8.64 (7)°]. In the crystal, inversion-related main mol-ecules are linked into dimers by pairs of N-H⋯N hydrogen bonds, generating an R(2) (2)(12) graph-set motif. These dimers are further connected by N-H⋯O and C-H⋯N hydrogen bonds, forming a layer structure extending parallel to the (011) plane. In addition, the mol-ecules within the layers inter-act with each other via C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 22719712      PMCID: PMC3379514          DOI: 10.1107/S1600536812024142

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of chromene compounds, see: Coujon et al. (2002 ▶). For the bioactivity of chromene compounds see: Kaye & Nocanda (2002 ▶). For similar structures, see: Hu et al. (2012 ▶); Mohamed et al. (2012 ▶). For bond-length data, see: Allen et al. (1987 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C18H17ClN2O2·C3H6O M = 386.86 Triclinic, a = 8.1707 (2) Å b = 9.4386 (2) Å c = 13.5192 (4) Å α = 84.446 (1)° β = 82.546 (2)° γ = 78.625 (1)° V = 1010.76 (4) Å3 Z = 2 Mo Kα radiation μ = 0.21 mm−1 T = 296 K 0.28 × 0.25 × 0.23 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.942, T max = 0.952 16320 measured reflections 4769 independent reflections 3390 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.126 S = 1.04 4769 reflections 248 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024142/xu5550sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024142/xu5550Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024142/xu5550Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H17ClN2O2·C3H6OZ = 2
Mr = 386.86F(000) = 408
Triclinic, P1Dx = 1.271 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1707 (2) ÅCell parameters from 430 reflections
b = 9.4386 (2) Åθ = 2.2–21°
c = 13.5192 (4) ŵ = 0.21 mm1
α = 84.446 (1)°T = 296 K
β = 82.546 (2)°Prism, colourless
γ = 78.625 (1)°0.28 × 0.25 × 0.23 mm
V = 1010.76 (4) Å3
Bruker Kappa APEXII CCD diffractometer4769 independent reflections
Radiation source: fine-focus sealed tube3390 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
Detector resolution: 0.81 pixels mm-1θmax = 27.9°, θmin = 1.5°
ω scansh = −9→10
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −12→12
Tmin = 0.942, Tmax = 0.952l = −17→17
16320 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.126H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0552P)2 + 0.2106P] where P = (Fo2 + 2Fc2)/3
4769 reflections(Δ/σ)max < 0.001
248 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.23217 (8)−0.04097 (7)0.07282 (5)0.0908 (3)
O10.49042 (12)0.48205 (10)0.35120 (8)0.0400 (3)
O21.05221 (14)0.51811 (13)0.37189 (11)0.0565 (5)
N10.67987 (18)0.01830 (15)0.51140 (12)0.0536 (5)
N20.36160 (16)0.29958 (14)0.40904 (11)0.0480 (5)
C10.92881 (17)0.24000 (15)0.30888 (11)0.0342 (4)
C21.05201 (19)0.12327 (17)0.33381 (14)0.0460 (5)
C31.1449 (2)0.03660 (19)0.26177 (16)0.0555 (6)
C41.1148 (2)0.06724 (19)0.16419 (15)0.0531 (6)
C50.9934 (2)0.18223 (19)0.13653 (14)0.0513 (6)
C60.9008 (2)0.26753 (17)0.20960 (12)0.0430 (5)
C70.82134 (17)0.32702 (15)0.39096 (11)0.0337 (4)
C80.65888 (18)0.27155 (15)0.42120 (11)0.0335 (4)
C90.50856 (18)0.34425 (15)0.39607 (11)0.0342 (4)
C100.62537 (18)0.55179 (15)0.33926 (11)0.0334 (4)
C110.77873 (17)0.48648 (15)0.36014 (11)0.0326 (4)
C120.66848 (18)0.13136 (16)0.47074 (12)0.0380 (4)
C130.90997 (19)0.57350 (16)0.35344 (12)0.0388 (5)
C140.8623 (2)0.73361 (17)0.32758 (14)0.0463 (5)
C150.7272 (2)0.77363 (16)0.25591 (12)0.0409 (5)
C160.57651 (18)0.70488 (15)0.30076 (12)0.0387 (5)
C170.6697 (2)0.93797 (18)0.24419 (17)0.0592 (7)
C180.7976 (2)0.7186 (2)0.15339 (14)0.0564 (6)
O30.5451 (2)0.50051 (18)0.11608 (13)0.0843 (7)
C190.4295 (3)0.4388 (2)0.11692 (15)0.0603 (7)
C200.4577 (4)0.2802 (3)0.1159 (2)0.0995 (13)
C210.2546 (3)0.5175 (3)0.1176 (3)0.1166 (13)
H21.072600.102800.400200.0550*
H2A0.355100.214500.436600.0580*
H2B0.273400.355800.389900.0580*
H31.22690−0.041700.279500.0670*
H50.974000.202300.069900.0620*
H60.818000.345000.191500.0520*
H70.883700.314700.449400.0410*
H14A0.961800.769800.297400.0560*
H14B0.821900.781600.388700.0560*
H16A0.515300.760700.355000.0460*
H16B0.501600.709600.250000.0460*
H17A0.764400.982700.220100.0890*
H17B0.620600.972800.307800.0890*
H17C0.587800.961600.197400.0890*
H18A0.712400.743900.108700.0850*
H18B0.832100.615100.160000.0850*
H18C0.892400.762100.127100.0850*
H20A0.419900.254900.056800.1490*
H20B0.396300.240900.174000.1490*
H20C0.575500.241200.116200.1490*
H21A0.250200.618000.126200.1750*
H21B0.185500.477300.171700.1750*
H21C0.214100.508400.055400.1750*
U11U22U33U12U13U23
Cl10.0881 (4)0.0749 (4)0.1017 (5)−0.0010 (3)0.0216 (3)−0.0411 (3)
O10.0293 (5)0.0326 (5)0.0566 (7)−0.0079 (4)−0.0069 (5)0.0111 (5)
O20.0351 (6)0.0490 (7)0.0871 (10)−0.0102 (5)−0.0169 (6)0.0050 (6)
N10.0469 (8)0.0429 (8)0.0700 (10)−0.0113 (6)−0.0163 (7)0.0197 (7)
N20.0314 (7)0.0391 (7)0.0715 (10)−0.0099 (6)−0.0074 (6)0.0151 (7)
C10.0271 (7)0.0287 (7)0.0468 (9)−0.0067 (6)−0.0050 (6)0.0019 (6)
C20.0354 (8)0.0405 (9)0.0591 (11)−0.0009 (7)−0.0090 (7)0.0036 (8)
C30.0384 (9)0.0392 (9)0.0830 (14)0.0046 (7)−0.0040 (9)−0.0041 (9)
C40.0451 (10)0.0430 (9)0.0698 (13)−0.0097 (8)0.0099 (8)−0.0169 (8)
C50.0579 (11)0.0464 (10)0.0500 (10)−0.0122 (8)−0.0019 (8)−0.0055 (8)
C60.0431 (9)0.0350 (8)0.0497 (10)−0.0035 (7)−0.0075 (7)−0.0016 (7)
C70.0304 (7)0.0318 (7)0.0395 (8)−0.0065 (6)−0.0093 (6)0.0036 (6)
C80.0330 (7)0.0294 (7)0.0371 (8)−0.0063 (6)−0.0038 (6)0.0036 (6)
C90.0344 (7)0.0308 (7)0.0365 (8)−0.0083 (6)−0.0020 (6)0.0037 (6)
C100.0323 (7)0.0291 (7)0.0384 (8)−0.0078 (6)−0.0012 (6)−0.0006 (6)
C110.0306 (7)0.0287 (7)0.0383 (8)−0.0060 (6)−0.0031 (6)−0.0011 (6)
C120.0315 (7)0.0387 (8)0.0430 (8)−0.0066 (6)−0.0072 (6)0.0050 (7)
C130.0363 (8)0.0367 (8)0.0443 (9)−0.0093 (6)−0.0050 (6)−0.0024 (6)
C140.0442 (9)0.0355 (8)0.0619 (11)−0.0141 (7)−0.0079 (8)−0.0013 (7)
C150.0423 (8)0.0298 (8)0.0508 (9)−0.0108 (6)−0.0030 (7)0.0019 (7)
C160.0360 (8)0.0286 (7)0.0488 (9)−0.0032 (6)−0.0022 (7)0.0016 (6)
C170.0613 (11)0.0318 (9)0.0848 (14)−0.0125 (8)−0.0127 (10)0.0085 (9)
C180.0596 (11)0.0564 (11)0.0512 (11)−0.0167 (9)0.0037 (8)0.0048 (8)
O30.0928 (12)0.0868 (11)0.0863 (12)−0.0419 (10)−0.0209 (9)−0.0046 (9)
C190.0682 (13)0.0644 (12)0.0506 (11)−0.0211 (10)−0.0033 (9)−0.0024 (9)
C200.109 (2)0.0637 (15)0.132 (3)−0.0259 (15)−0.0305 (18)0.0047 (15)
C210.0753 (18)0.115 (2)0.140 (3)0.0068 (16)0.0197 (17)−0.006 (2)
Cl1—C41.743 (2)C15—C171.528 (2)
O1—C91.3697 (17)C15—C181.529 (2)
O1—C101.3765 (18)C2—H20.9300
O2—C131.223 (2)C3—H30.9300
O3—C191.202 (3)C5—H50.9300
N1—C121.145 (2)C6—H60.9300
N2—C91.335 (2)C7—H70.9800
N2—H2B0.8600C14—H14B0.9700
N2—H2A0.8600C14—H14A0.9700
C1—C21.385 (2)C16—H16A0.9700
C1—C61.382 (2)C16—H16B0.9700
C1—C71.522 (2)C17—H17B0.9600
C2—C31.383 (3)C17—H17C0.9600
C3—C41.366 (3)C17—H17A0.9600
C4—C51.377 (2)C18—H18B0.9600
C5—C61.384 (2)C18—H18C0.9600
C7—C111.507 (2)C18—H18A0.9600
C7—C81.515 (2)C19—C201.470 (3)
C8—C91.351 (2)C19—C211.474 (4)
C8—C121.417 (2)C20—H20A0.9600
C10—C111.335 (2)C20—H20B0.9600
C10—C161.483 (2)C20—H20C0.9600
C11—C131.463 (2)C21—H21A0.9600
C13—C141.503 (2)C21—H21B0.9600
C14—C151.530 (2)C21—H21C0.9600
C15—C161.533 (2)
C9—O1—C10118.92 (11)C4—C5—H5121.00
C9—N2—H2B120.00C6—C5—H5121.00
H2A—N2—H2B120.00C1—C6—H6119.00
C9—N2—H2A120.00C5—C6—H6119.00
C6—C1—C7122.04 (13)C1—C7—H7108.00
C2—C1—C6118.08 (14)C8—C7—H7108.00
C2—C1—C7119.74 (14)C11—C7—H7108.00
C1—C2—C3121.22 (17)C13—C14—H14A109.00
C2—C3—C4119.25 (16)C13—C14—H14B109.00
Cl1—C4—C3119.52 (14)C15—C14—H14A109.00
C3—C4—C5121.21 (17)C15—C14—H14B109.00
Cl1—C4—C5119.27 (15)H14A—C14—H14B108.00
C4—C5—C6118.86 (17)C10—C16—H16A109.00
C1—C6—C5121.37 (15)C10—C16—H16B109.00
C1—C7—C11112.80 (12)C15—C16—H16A109.00
C1—C7—C8110.40 (12)C15—C16—H16B109.00
C8—C7—C11108.40 (12)H16A—C16—H16B108.00
C7—C8—C9123.08 (13)C15—C17—H17A109.00
C7—C8—C12117.87 (13)C15—C17—H17B109.00
C9—C8—C12118.83 (14)C15—C17—H17C109.00
N2—C9—C8128.24 (14)H17A—C17—H17B109.00
O1—C9—N2110.31 (12)H17A—C17—H17C110.00
O1—C9—C8121.45 (13)H17B—C17—H17C109.00
O1—C10—C11122.99 (13)C15—C18—H18A109.00
O1—C10—C16111.12 (12)C15—C18—H18B109.00
C11—C10—C16125.89 (14)C15—C18—H18C109.00
C10—C11—C13118.65 (13)H18A—C18—H18B109.00
C7—C11—C10122.53 (13)H18A—C18—H18C109.00
C7—C11—C13118.81 (12)H18B—C18—H18C110.00
N1—C12—C8178.38 (17)O3—C19—C20120.9 (2)
O2—C13—C11120.84 (14)O3—C19—C21122.05 (19)
O2—C13—C14121.28 (14)C20—C19—C21117.0 (2)
C11—C13—C14117.84 (13)C19—C20—H20A109.00
C13—C14—C15113.74 (13)C19—C20—H20B110.00
C16—C15—C17108.70 (13)C19—C20—H20C109.00
C16—C15—C18110.90 (13)H20A—C20—H20B109.00
C17—C15—C18108.98 (15)H20A—C20—H20C109.00
C14—C15—C18109.79 (14)H20B—C20—H20C109.00
C14—C15—C16108.05 (13)C19—C21—H21A109.00
C14—C15—C17110.41 (13)C19—C21—H21B109.00
C10—C16—C15113.11 (12)C19—C21—H21C109.00
C1—C2—H2119.00H21A—C21—H21B109.00
C3—C2—H2119.00H21A—C21—H21C110.00
C2—C3—H3120.00H21B—C21—H21C109.00
C4—C3—H3120.00
C9—O1—C10—C16−173.19 (12)C8—C7—C11—C10−15.79 (19)
C10—O1—C9—N2174.51 (12)C8—C7—C11—C13163.79 (13)
C10—O1—C9—C8−5.5 (2)C7—C8—C9—N2172.17 (15)
C9—O1—C10—C117.0 (2)C12—C8—C9—O1177.72 (13)
C7—C1—C2—C3176.02 (14)C12—C8—C9—N2−2.3 (2)
C2—C1—C6—C5−0.5 (2)C7—C8—C9—O1−7.8 (2)
C7—C1—C6—C5−176.29 (15)O1—C10—C11—C75.0 (2)
C6—C1—C2—C30.1 (2)O1—C10—C11—C13−174.58 (13)
C2—C1—C7—C8−94.69 (16)C16—C10—C11—C7−174.80 (14)
C2—C1—C7—C11143.88 (14)C16—C10—C11—C135.6 (2)
C6—C1—C7—C881.04 (17)O1—C10—C16—C15−162.22 (12)
C6—C1—C7—C11−40.39 (19)C11—C10—C16—C1517.6 (2)
C1—C2—C3—C40.3 (3)C7—C11—C13—O20.4 (2)
C2—C3—C4—Cl1179.66 (13)C7—C11—C13—C14−176.99 (14)
C2—C3—C4—C5−0.3 (3)C10—C11—C13—O2−180.00 (17)
Cl1—C4—C5—C6180.00 (15)C10—C11—C13—C142.6 (2)
C3—C4—C5—C6−0.1 (3)O2—C13—C14—C15148.89 (16)
C4—C5—C6—C10.5 (3)C11—C13—C14—C15−33.7 (2)
C1—C7—C8—C1267.77 (17)C13—C14—C15—C1653.89 (18)
C11—C7—C8—C917.28 (19)C13—C14—C15—C17172.65 (15)
C11—C7—C8—C12−168.22 (13)C13—C14—C15—C18−67.18 (18)
C1—C7—C11—C10106.77 (16)C14—C15—C16—C10−45.43 (17)
C1—C7—C8—C9−106.73 (16)C17—C15—C16—C10−165.27 (14)
C1—C7—C11—C13−73.65 (17)C18—C15—C16—C1074.94 (17)
D—H···AD—HH···AD···AD—H···A
N2—H2A···N1i0.862.303.1552 (19)171
N2—H2B···O2ii0.862.152.9949 (18)167
C2—H2···N1iii0.932.513.234 (2)135
C6—H6···Cg10.932.763.0785 (17)101
C17—H17A···Cg2iv0.962.933.8221 (18)155
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the O1/C7–C11 and C1–C6 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯N1i0.862.303.1552 (19)171
N2—H2B⋯O2ii0.862.152.9949 (18)167
C2—H2⋯N1iii0.932.513.234 (2)135
C17—H17ACg2iv0.962.933.8221 (18)155

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Amino-4-(2-chloro-phen-yl)-7,7-di-methyl-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile hemihydrate.

Authors:  Xiao-Lei Hu; Zhong-Xia Wang; Fang-Ming Wang; Guang-Fan Han
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-24

3.  2-Amino-4-(4-chloro-phen-yl)-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Antar A Abdelhamid; Kuldip Singh; M A Allahverdiyev
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-18

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  3 in total

1.  2-Amino-4-(4-methyl-phen-yl)-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Muhammad N Tahir; Antar A Abdelhamid; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-04

2.  2-Amino-4-(4-meth-oxy-phen-yl)-7,7-di-methyl-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile propan-2-one monosolvate.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Muhammad N Tahir; Antar A Abdelhamid; M A Allahverdiyev
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-27

3.  2-Amino-4-(4-meth-oxy-phen-yl)-5-oxo-5,6,7,8-tetra-hydro-4H-chromene-3-carbonitrile 1,4-dioxane hemisolvate.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Muhammad N Tahir; Antar A Abdelhamid; Sabry H H Younes
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23
  3 in total

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