Literature DB >> 22692259

A survey of informatics platforms that enable distributed comparative effectiveness research using multi-institutional heterogenous clinical data.

Dean F Sittig1, Brian L Hazlehurst, Jeffrey Brown, Shawn Murphy, Marc Rosenman, Peter Tarczy-Hornoch, Adam B Wilcox.   

Abstract

Comparative effectiveness research (CER) has the potential to transform the current health care delivery system by identifying the most effective medical and surgical treatments, diagnostic tests, disease prevention methods, and ways to deliver care for specific clinical conditions. To be successful, such research requires the identification, capture, aggregation, integration, and analysis of disparate data sources held by different institutions with diverse representations of the relevant clinical events. In an effort to address these diverse demands, there have been multiple new designs and implementations of informatics platforms that provide access to electronic clinical data and the governance infrastructure required for interinstitutional CER. The goal of this manuscript is to help investigators understand why these informatics platforms are required and to compare and contrast 6 large-scale, recently funded, CER-focused informatics platform development efforts. We utilized an 8-dimension, sociotechnical model of health information technology to help guide our work. We identified 6 generic steps that are necessary in any distributed, multi-institutional CER project: data identification, extraction, modeling, aggregation, analysis, and dissemination. We expect that over the next several years these projects will provide answers to many important, and heretofore unanswerable, clinical research questions.

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Year:  2012        PMID: 22692259      PMCID: PMC3415281          DOI: 10.1097/MLR.0b013e318259c02b

Source DB:  PubMed          Journal:  Med Care        ISSN: 0025-7079            Impact factor:   2.983


  27 in total

1.  Automated encoding of clinical documents based on natural language processing.

Authors:  Carol Friedman; Lyudmila Shagina; Yves Lussier; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2004-06-07       Impact factor: 4.497

2.  Measuring and improving performance in multicenter research consortia.

Authors:  Sarah M Greene; Gene Hart; Edward H Wagner
Journal:  J Natl Cancer Inst Monogr       Date:  2005

3.  Using electronic medical records to enable large-scale studies in psychiatry: treatment resistant depression as a model.

Authors:  R H Perlis; D V Iosifescu; V M Castro; S N Murphy; V S Gainer; J Minnier; T Cai; S Goryachev; Q Zeng; P J Gallagher; M Fava; J B Weilburg; S E Churchill; I S Kohane; J W Smoller
Journal:  Psychol Med       Date:  2011-06-20       Impact factor: 7.723

4.  Facilitating Clinical Research through the Health Information Exchange: Lipid Control as an Example.

Authors:  Vivienne J Zhu; Wanzhu Tu; Marc B Rosenman; J Marc Overhage
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

5.  Building a virtual cancer research organization.

Authors:  Mark C Hornbrook; Gene Hart; Jennifer L Ellis; Donald J Bachman; Gary Ansell; Sarah M Greene; Edward H Wagner; Roy Pardee; Mark M Schmidt; Ann Geiger; Amy L Butani; Terry Field; Hassan Fouayzi; Irina Miroshnik; Liyan Liu; Robert Diseker; Karen Wells; Rick Krajenta; Lois Lamerato; Christine Neslund Dudas
Journal:  J Natl Cancer Inst Monogr       Date:  2005

6.  Genetic basis of autoantibody positive and negative rheumatoid arthritis risk in a multi-ethnic cohort derived from electronic health records.

Authors:  Fina Kurreeman; Katherine Liao; Lori Chibnik; Brendan Hickey; Eli Stahl; Vivian Gainer; Gang Li; Lynn Bry; Scott Mahan; Kristin Ardlie; Brian Thomson; Peter Szolovits; Susanne Churchill; Shawn N Murphy; Tianxi Cai; Soumya Raychaudhuri; Isaac Kohane; Elizabeth Karlson; Robert M Plenge
Journal:  Am J Hum Genet       Date:  2011-01-07       Impact factor: 11.025

7.  A new sociotechnical model for studying health information technology in complex adaptive healthcare systems.

Authors:  Dean F Sittig; Hardeep Singh
Journal:  Qual Saf Health Care       Date:  2010-10

8.  Design and implementation of the Indianapolis Network for Patient Care and Research.

Authors:  J M Overhage; W M Tierney; C J McDonald
Journal:  Bull Med Libr Assoc       Date:  1995-01

9.  A visual interface designed for novice users to find research patient cohorts in a large biomedical database.

Authors:  Shawn N Murphy; Vivian Gainer; Henry C Chueh
Journal:  AMIA Annu Symp Proc       Date:  2003

10.  Extracting principal diagnosis, co-morbidity and smoking status for asthma research: evaluation of a natural language processing system.

Authors:  Qing T Zeng; Sergey Goryachev; Scott Weiss; Margarita Sordo; Shawn N Murphy; Ross Lazarus
Journal:  BMC Med Inform Decis Mak       Date:  2006-07-26       Impact factor: 2.796

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  22 in total

1.  Improving quality and safety of care using "technovigilance": an ethnographic case study of secondary use of data from an electronic prescribing and decision support system.

Authors:  Mary Dixon-Woods; Sabi Redwood; Myles Leslie; Joel Minion; Graham P Martin; Jamie J Coleman
Journal:  Milbank Q       Date:  2013-09       Impact factor: 4.911

2.  Knowledge management and informatics considerations for comparative effectiveness research: a case-driven exploration.

Authors:  Peter J Embi; Courtney Hebert; Gayle Gordillo; Kelly Kelleher; Philip R O Payne
Journal:  Med Care       Date:  2013-08       Impact factor: 2.983

3.  Clinical Research Informatics for Big Data and Precision Medicine.

Authors:  C Weng; M G Kahn
Journal:  Yearb Med Inform       Date:  2016-11-10

4.  Using the CER Hub to ensure data quality in a multi-institution smoking cessation study.

Authors:  Kari L Walker; Olga Kirillova; Suzanne E Gillespie; David Hsiao; Valentyna Pishchalenko; Akshatha Kalsanka Pai; Jon E Puro; Robert Plumley; Rustam Kudyakov; Weiming Hu; Art Allisany; MaryAnn McBurnie; Stephen E Kurtz; Brian L Hazlehurst
Journal:  J Am Med Inform Assoc       Date:  2014-07-03       Impact factor: 4.497

5.  Desiderata for healthcare integrated data repositories based on architectural comparison of three public repositories.

Authors:  Vojtech Huser; James J Cimino
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

Review 6.  Clinical Decision Support: a 25 Year Retrospective and a 25 Year Vision.

Authors:  B Middleton; D F Sittig; A Wright
Journal:  Yearb Med Inform       Date:  2016-08-02

7.  Practice-Based Knowledge Discovery for Comparative Effectiveness Research: An Organizing Framework.

Authors:  Robert J Lucero; Suzanne Bakken
Journal:  Can J Nurs Res       Date:  2013-03

Review 8.  Facilitating biomedical researchers' interrogation of electronic health record data: Ideas from outside of biomedical informatics.

Authors:  Gregory W Hruby; Konstantina Matsoukas; James J Cimino; Chunhua Weng
Journal:  J Biomed Inform       Date:  2016-03-10       Impact factor: 6.317

9.  The Community Health Applied Research Network (CHARN) Data Warehouse: a Resource for Patient-Centered Outcomes Research and Quality Improvement in Underserved, Safety Net Populations.

Authors:  Reesa Laws; Suzanne Gillespie; Jon Puro; Stephan Van Rompaey; Thu Quach; Joseph Carroll; Rosy Chang Weir; Phil Crawford; Chris Grasso; Erin Kaleba; Mary Ann McBurnie
Journal:  EGEMS (Wash DC)       Date:  2014-10-14

10.  Learning How to Learn: How AcademyHealth is Supporting Evidence Generation in a Transforming World.

Authors:  Lisa Simpson
Journal:  EGEMS (Wash DC)       Date:  2013-01-17
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