Literature DB >> 22660977

Nucleic acid-based diagnostics for infectious diseases in public health affairs.

Albert Cheung-Hoi Yu1, Greg Vatcher, Xin Yue, Yan Dong, Mao Hua Li, Patrick H K Tam, Parker Y L Tsang, April K Y Wong, Michael H K Hui, Bin Yang, Hao Tang, Lok-Ting Lau.   

Abstract

Infectious diseases, mostly caused by bacteria and viruses but also a result of fungal and parasitic infection, have been one of the most important public health concerns throughout human history. The first step in combating these pathogens is to get a timely and accurate diagnosis at an affordable cost. Many kinds of diagnostics have been developed, such as pathogen culture, biochemical tests and serological tests, to help detect and fight against the causative agents of diseases. However, these diagnostic tests are generally unsatisfactory because they are not particularly sensitive and specific and are unable to deliver speedy results. Nucleic acid-based diagnostics, detecting pathogens through the identification of their genomic sequences, have shown promise to overcome the above limitations and become more widely adopted in clinical tests. Here we review some of the most popular nucleic acid-based diagnostics and focus on their adaptability and applicability to routine clinical usage. We also compare and contrast the characteristics of different types of nucleic acid-based diagnostics.

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Year:  2012        PMID: 22660977      PMCID: PMC7088663          DOI: 10.1007/s11684-012-0195-5

Source DB:  PubMed          Journal:  Front Med        ISSN: 2095-0217            Impact factor:   4.592


  117 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human.

Authors:  Huai-Dong Song; Chang-Chun Tu; Guo-Wei Zhang; Sheng-Yue Wang; Kui Zheng; Lian-Cheng Lei; Qiu-Xia Chen; Yu-Wei Gao; Hui-Qiong Zhou; Hua Xiang; Hua-Jun Zheng; Shur-Wern Wang Chern; Feng Cheng; Chun-Ming Pan; Hua Xuan; Sai-Juan Chen; Hui-Ming Luo; Duan-Hua Zhou; Yu-Fei Liu; Jian-Feng He; Peng-Zhe Qin; Ling-Hui Li; Yu-Qi Ren; Wen-Jia Liang; Ye-Dong Yu; Larry Anderson; Ming Wang; Rui-Heng Xu; Xin-Wei Wu; Huan-Ying Zheng; Jin-Ding Chen; Guodong Liang; Yang Gao; Ming Liao; Ling Fang; Li-Yun Jiang; Hui Li; Fang Chen; Biao Di; Li-Juan He; Jin-Yan Lin; Suxiang Tong; Xiangang Kong; Lin Du; Pei Hao; Hua Tang; Andrea Bernini; Xiao-Jing Yu; Ottavia Spiga; Zong-Ming Guo; Hai-Yan Pan; Wei-Zhong He; Jean-Claude Manuguerra; Arnaud Fontanet; Antoine Danchin; Neri Niccolai; Yi-Xue Li; Chung-I Wu; Guo-Ping Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-04       Impact factor: 11.205

3.  Rapid and simple method for purification of nucleic acids.

Authors:  R Boom; C J Sol; M M Salimans; C L Jansen; P M Wertheim-van Dillen; J van der Noordaa
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

4.  Enhancing DNA hybridization kinetics through constriction-based dielectrophoresis.

Authors:  Nathan Swami; Chia-Fu Chou; Venkatraman Ramamurthy; Vasudha Chaurey
Journal:  Lab Chip       Date:  2009-09-08       Impact factor: 6.799

Review 5.  Self-assembled monolayers for biosensors.

Authors:  T Wink; S J van Zuilen; A Bult; W P van Bennkom
Journal:  Analyst       Date:  1997-04       Impact factor: 4.616

6.  Electric field directed nucleic acid hybridization on microchips.

Authors:  C F Edman; D E Raymond; D J Wu; E Tu; R G Sosnowski; W F Butler; M Nerenberg; M J Heller
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

7.  Electrical detection of DNA hybridization: three extraction techniques based on interdigitated Al/Al2O3 capacitors.

Authors:  L Moreno-Hagelsieb; B Foultier; G Laurent; R Pampin; J Remacle; J-P Raskin; D Flandre
Journal:  Biosens Bioelectron       Date:  2006-11-28       Impact factor: 10.618

8.  Rapid detection and typing of influenza A and B by loop-mediated isothermal amplification: comparison with immunochromatography and virus isolation.

Authors:  Masahiro Ito; Masahiro Watanabe; Naoko Nakagawa; Toshiaki Ihara; Yoshinobu Okuno
Journal:  J Virol Methods       Date:  2006-04-17       Impact factor: 2.014

9.  Rapid detection of the severe acute respiratory syndrome (SARS) coronavirus by a loop-mediated isothermal amplification assay.

Authors:  Leo L M Poon; Cynthia S W Leung; Masato Tashiro; Kwok Hung Chan; Bonnie W Y Wong; Kwok Yung Yuen; Yi Guan; Joseph S M Peiris
Journal:  Clin Chem       Date:  2004-03-30       Impact factor: 8.327

10.  Nucleic acid sequence-based amplification methods to detect avian influenza virus.

Authors:  Lok-Ting Lau; Jill Banks; Rebecca Aherne; Ian H Brown; Natalie Dillon; Richard A Collins; Ka-Yun Chan; Yin-Wan Wendy Fung; Jun Xing; Albert C H Yu
Journal:  Biochem Biophys Res Commun       Date:  2004-01-09       Impact factor: 3.575

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  4 in total

1.  The changing culture of the microbiology laboratory.

Authors:  Kevin B Laupland; Louis Valiquette
Journal:  Can J Infect Dis Med Microbiol       Date:  2013       Impact factor: 2.471

2.  Optimizing peptide nucleic acid probes for hybridization-based detection and identification of bacterial pathogens.

Authors:  Kathleen E Mach; Aniruddha M Kaushik; Kuangwen Hsieh; Pak Kin Wong; Tza-Huei Wang; Joseph C Liao
Journal:  Analyst       Date:  2019-02-25       Impact factor: 4.616

3.  Nucleic acid purification from plants, animals and microbes in under 30 seconds.

Authors:  Yiping Zou; Michael Glenn Mason; Yuling Wang; Eugene Wee; Conny Turni; Patrick J Blackall; Matt Trau; Jose Ramon Botella
Journal:  PLoS Biol       Date:  2017-11-21       Impact factor: 8.029

Review 4.  Flavivirus Persistence in Wildlife Populations.

Authors:  Maria Raisa Blahove; James Richard Carter
Journal:  Viruses       Date:  2021-10-18       Impact factor: 5.048

  4 in total

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